mRNA_Ecto-sp13_S_contig70418.18099.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig70418.18099.1 vs. uniprot
Match: A0A6H5JG28_9PHAE (FAD-binding PCMH-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG28_9PHAE) HSP 1 Score: 385 bits (989), Expect = 1.210e-125 Identity = 182/200 (91.00%), Postives = 193/200 (96.50%), Query Frame = 1
Query: 1 MARLGPGARLTNLAAELKKKGVTIPHGECPEVCIGGHVQTGSFGHLLRSYGLALDHVTSFDIVLELNGRVSNHTIKRPSKEVDEKSSIEDRIYWGVLGGGPGSFGVITEIEFECMRDAAHRFSRGYNGVYRYTKNSFEEAMGVVQRRTQQVVQDRTGPLADGALSKDCDLMITAMTNSGDLQGGTFKPSVIVVEMVHGNI 600
MARLGPGARLT LAAE+KKKGVTIPHGECPEVCIGGHVQTG FGHLLRSYGLALDHV SF+IVL LNGRVSNHTIKRPSK+VDEKSSIEDRIYWGVLGGGPGSFGV+TEIEFEC+RDAAHRFSRGYNGVYRY+KN FEEAMGVVQRRTQQVVQDR+GPL DG+LSKDCDLMI+AMTNSGDL GGTFKPSVI+VEMVHGN+
Sbjct: 497 MARLGPGARLTTLAAEMKKKGVTIPHGECPEVCIGGHVQTGGFGHLLRSYGLALDHVNSFEIVLNLNGRVSNHTIKRPSKKVDEKSSIEDRIYWGVLGGGPGSFGVVTEIEFECIRDAAHRFSRGYNGVYRYSKNRFEEAMGVVQRRTQQVVQDRSGPLTDGSLSKDCDLMISAMTNSGDLMGGTFKPSVILVEMVHGNV 696
BLAST of mRNA_Ecto-sp13_S_contig70418.18099.1 vs. uniprot
Match: D7G4Z7_ECTSI (FAD-binding PCMH-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Z7_ECTSI) HSP 1 Score: 375 bits (962), Expect = 4.120e-122 Identity = 178/200 (89.00%), Postives = 190/200 (95.00%), Query Frame = 1
Query: 1 MARLGPGARLTNLAAELKKKGVTIPHGECPEVCIGGHVQTGSFGHLLRSYGLALDHVTSFDIVLELNGRVSNHTIKRPSKEVDEKSSIEDRIYWGVLGGGPGSFGVITEIEFECMRDAAHRFSRGYNGVYRYTKNSFEEAMGVVQRRTQQVVQDRTGPLADGALSKDCDLMITAMTNSGDLQGGTFKPSVIVVEMVHGNI 600
MARLGPGARLTNLAAELKK GVTIPHGECPEVCIGGHVQ+G FGHLLRSYGLALDHV SF+IVL+LNG VS +TIKRPSK+VDEKSSIEDRIYWGVLGGGPGSFGVITEIEFEC++DAAHRFSRGYNGVYRY+K FEEAMGVVQRRTQQVVQDRTGPL GALSKDCDLMITAM+NSGDL GGTFKP+VI+VEMVHGN+
Sbjct: 395 MARLGPGARLTNLAAELKKNGVTIPHGECPEVCIGGHVQSGGFGHLLRSYGLALDHVNSFEIVLDLNGHVSTYTIKRPSKKVDEKSSIEDRIYWGVLGGGPGSFGVITEIEFECIKDAAHRFSRGYNGVYRYSKGRFEEAMGVVQRRTQQVVQDRTGPLTKGALSKDCDLMITAMSNSGDLSGGTFKPAVILVEMVHGNV 594
BLAST of mRNA_Ecto-sp13_S_contig70418.18099.1 vs. uniprot
Match: A0A5C6FAX9_9BACT (6-hydroxy-D-nicotine oxidase n=1 Tax=Rubripirellula tenax TaxID=2528015 RepID=A0A5C6FAX9_9BACT) HSP 1 Score: 165 bits (418), Expect = 9.520e-44 Identity = 87/198 (43.94%), Postives = 121/198 (61.11%), Query Frame = 1
Query: 7 RLGPGARLTNLAAELKKKGVTIPHGECPEVCIGGHVQTGSFGHLLRSYGLALDHVTSFDIVLELNGRVSNHTIKRPSKEVDEKSSIEDRIYWGVLGGGPGSFGVITEIEFECMRDAAHRFSRGYNGVYRYTKNSFEEAMGVVQRRTQQVVQDRTGPLADGALSKDCDLMITAMTNSGDLQGGTFKPSVIVVEMVHGNI 600
R+GP RL N+A K + VTIPHGECP+V IGGH QTG +GHL+RS+GL D+VTSFDI+L +G S T+ RP +E + D ++WGVLGG GSFG++T EF+C+ D AH S G+ RY +++F + M Q+ T+Q+ AD L D D M++ ++ F +VVE+VHGN+
Sbjct: 511 RVGPAVRLVNVATRFKNERVTIPHGECPQVAIGGHAQTGGYGHLIRSFGLCTDYVTSFDIILA-DG--SKRTVGRP-REDTTTTPENDELFWGVLGGNAGSFGIVTSYEFDCIEDVAHPNSYGFTFRRRYKESAFRKLMKEAQKWTKQI--------ADKTLDPDLDFMMSVGSSRS-----LFPFPGLVVELVHGNL 691
BLAST of mRNA_Ecto-sp13_S_contig70418.18099.1 vs. uniprot
Match: A0A5C1APN3_9BACT (Aclacinomycin-N/aclacinomycin-A oxidase n=1 Tax=Limnoglobus roseus TaxID=2598579 RepID=A0A5C1APN3_9BACT) HSP 1 Score: 160 bits (405), Expect = 5.380e-42 Identity = 87/199 (43.72%), Postives = 122/199 (61.31%), Query Frame = 1
Query: 10 LGPGARLTNLAAELKKKGVTIPHGECPEVCIGGHVQTGSFGHLLRSYGLALDHVTSFDIVLELNGRVSNHTIKRPSKEVDEKSSIEDRIYWGVLGGGPGSFGVITEIEFECMRDAAHRFSRGYNGVYRYTKNSFEEAMGVVQRRTQQVVQDRTGPLADGALSKDCDLMITAMTNSGDLQGGTFKPSV--IVVEMVHGNI 600
+GP LT LA K +GVTIPHGECP VCIGGH QTG FGHLLRS+GL LD+VT IVL +G V T++RP+ ++ +++++WGVLGG GSFG++T F+C++D+ H S GY+ Y K ++ M Q TQ +V G+L + D M+T ++ + TF+P V I+VE+VH N+
Sbjct: 503 VGPAVPLTRLARFFKGQGVTIPHGECPLVCIGGHAQTGGFGHLLRSFGLTLDYVTELTIVLS-DGSV--RTVQRPA---GAPTTDDEKLFWGVLGGNAGSFGIVTNYRFKCIKDSDHPKSFGYSAKRLYRKGRYKNLMKQAQAWTQGIVA--------GSLPRGIDFMMTVLSKAD-----TFRPPVPGILVELVHANL 682
BLAST of mRNA_Ecto-sp13_S_contig70418.18099.1 vs. uniprot
Match: A0A1Y5GVH9_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium 45_16_T64 TaxID=1856297 RepID=A0A1Y5GVH9_9GAMM) HSP 1 Score: 160 bits (405), Expect = 5.410e-42 Identity = 85/201 (42.29%), Postives = 120/201 (59.70%), Query Frame = 1
Query: 1 MARLGPGARLTNLAAELKKKGVTIPHGECPEVCIGGHVQTGSFGHLLRSYGLALDHVTSFDIVLELNGRVSNHTIKRP-SKEVDEKSSIEDRIYWGVLGGGPGSFGVITEIEFECMRDAAHRFSRGYNGVYRYTKNSFEEAMGVVQRRTQQVVQDRTGPLADGALSKDCDLMITAMTNSGDLQGGTFKPSVIVVEMVHGNI 600
+ +GP RLT LA K KG+TIPHGECP V IGGH QTG +GHL+RS+GLALD++ +FDIVL +G + T P + + ++ I+WGVLGG GSFG++T FEC++D+ H S GY+ RY+K+ + + M VQ T+++ DG L D M+T ++ F P V++VE VH N+
Sbjct: 504 IVNVGPAIRLTKLARTFKSKGITIPHGECPLVAIGGHAQTGGYGHLVRSFGLALDYIQAFDIVLA-DGSLRKITRPIPGAPPTTSEGKLDKEIFWGVLGGNAGSFGIVTNYTFECVKDSDHPNSYGYSSKARYSKSRYRKLMKEVQTWTEEI--------EDGTLQPGIDFMMTVESSQVP-----FFP-VLLVETVHANL 689
BLAST of mRNA_Ecto-sp13_S_contig70418.18099.1 vs. uniprot
Match: UPI00197DD6CE (FAD-binding oxidoreductase n=1 Tax=Nostoc sp. UHCC 0702 TaxID=2814655 RepID=UPI00197DD6CE) HSP 1 Score: 159 bits (402), Expect = 1.430e-41 Identity = 88/203 (43.35%), Postives = 124/203 (61.08%), Query Frame = 1
Query: 1 MARLGPGARLTNLAAELKKKGVTIPHGECPEVCIGGHVQTGSFGHLLRSYGLALDHVTSFDIVLELNGRVSNHTIKRP---SKEVDEKSSIEDRIYWGVLGGGPGSFGVITEIEFECMRDAAHRFSRGYNGVYRYTKNSFEEAMGVVQRRTQQVVQDRTGPLADGALSKDCDLMITAMTNSGDLQGGTFKPSVIVVEMVHGNI 600
+A +GP +LT+LAAE K K +TIPHGECP V IGGH QTG +GHL+R++GLALDHV FDIVL +GR T RP S ++ ++ I+WGVLGG GSFG++T +F+C++D+ S GY Y K + E M +VQ ++Q+ P G L++D D M+T S D P +++VE ++GN+
Sbjct: 522 IAEVGPAVKLTDLAAEFKTKNITIPHGECPMVAIGGHAQTGGYGHLVRNFGLALDHVEEFDIVLA-DGRFRRVT--RPVNISSPSSDEEKLDREIFWGVLGGNAGSFGIVTGYKFKCIKDSDRPNSYGYTASGSYKKVRYHELMKLVQAWSKQIKD----PTQHGELTEDFDFMMTV--KSADELPHLPIP-ILLVEALYGNL 714
BLAST of mRNA_Ecto-sp13_S_contig70418.18099.1 vs. uniprot
Match: A0A8J7QHK7_9BACT (FAD-binding oxidoreductase n=1 Tax=Acanthopleuribacter pedis TaxID=442870 RepID=A0A8J7QHK7_9BACT) HSP 1 Score: 155 bits (392), Expect = 3.100e-40 Identity = 87/201 (43.28%), Postives = 124/201 (61.69%), Query Frame = 1
Query: 1 MARLGPGARLTNLAAELKKKGVTIPHGECPEVCIGGHVQTGSFGHLLRSYGLALDHVTSFDIVLELNGRVSNHTIKRPSKEVDE-KSSIEDRIYWGVLGGGPGSFGVITEIEFECMRDAAHRFSRGYNGVYRYTKNSFEEAMGVVQRRTQQVVQDRTGPLADGALSKDCDLMITAMTNSGDLQGGTFKPSVIVVEMVHGNI 600
+ +GP ARLTN+A E K G+TIPHGECP V IGGH QTG +GHL RS+GLA+DHV +F++VL +GR T RP ++ D +S+E++++W VLGG GSFG++T FE +RD + S YN +Y +++ + M VQ ++ V ADG+L D M+T + +SG + F P V++VE V I
Sbjct: 503 IVNVGPAARLTNIAQEFKSAGITIPHGECPLVAIGGHAQTGGYGHLARSFGLAMDHVVAFEMVLA-DGRFLKLT--RPDQDFDPANASLEEKLFWAVLGGNAGSFGIVTNYTFETLRDRDYPHSNWYNATLKYRASTYRDLMKQVQTWSRGV--------ADGSLPAGMDWMMT-VESSGRMP---FFP-VMLVEFVDPGI 687
BLAST of mRNA_Ecto-sp13_S_contig70418.18099.1 vs. uniprot
Match: A0A3L7V4K4_9BACT (FAD-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7V4K4_9BACT) HSP 1 Score: 148 bits (373), Expect = 1.150e-37 Identity = 75/159 (47.17%), Postives = 98/159 (61.64%), Query Frame = 1
Query: 10 LGPGARLTNLAAELKKKGVTIPHGECPEVCIGGHVQTGSFGHLLRSYGLALDHVTSFDIVLELNGRVSNHTIKRPSKEVDEKSSIEDRIYWGVLGGGPGSFGVITEIEFECMRDAAHRFSRGYNGVYRYTKNSFEEAMGVVQRRTQQVVQDRTGPLADG 486
+GPG RLT LAA LK+KG+ IPHGECP VC+GGH QTG FGHL R +GL LD+V +F IVL +G V T+ RP + ++ ++WGVLGG GSFG++ FEC++D ++ S Y +Y K F M V Q T+ V + G LA G
Sbjct: 541 VGPGVRLTQLAAYLKEKGIAIPHGECPMVCVGGHAQTGGFGHLFRCFGLTLDYVKAFTIVLA-DGSV--RTLNRPK---GTPKTADEELFWGVLGGNAGSFGIVISYVFECLKDGDYKSSFSYTARRKYDKTFFRTMMNVTQNWTKAVEK---GTLAQG 690
BLAST of mRNA_Ecto-sp13_S_contig70418.18099.1 vs. uniprot
Match: A0A2V3IUU4_9FLOR (FAD-linked oxidoreductase azaL n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUU4_9FLOR) HSP 1 Score: 146 bits (369), Expect = 3.780e-37 Identity = 73/173 (42.20%), Postives = 103/173 (59.54%), Query Frame = 1
Query: 10 LGPGARLTNLAAELKKKGVTIPHGECPEVCIGGHVQTGSFGHLLRSYGLALDHVTSFDIVLELNGRVSNHTIKRPSKEVDEKSSIEDRIYWGVLGGGPGSFGVITEIEFECMRDAAHRFSRGYNGVYRYTKNSFEEAMGVVQRRTQQVVQDRTGPLADGALSKDCDLMITAMT 528
+G G LT+ + + +T+PHGECP VC+GGH Q+G +GH +RS GL +D+V SF IVL + + + RP+ + +K D IY+GVLGGGPGSFGV+TE +E + D H +S G + Y Y+K F M +VQ TQ + +G L D DLM TA++
Sbjct: 520 VGSGTPLTHASTFMTDNKLTVPHGECPLVCVGGHTQSGGYGHTIRSQGLLVDYVRSFRIVLADSSYIQ---VYRPNVDATDKHEHNDDIYYGVLGGGPGSFGVVTEYTYETVHDDDHPYSTGLSCAYMYSKKRFRNIMKIVQEWTQGI--------KEGTLQGDMDLMATAIS 681
BLAST of mRNA_Ecto-sp13_S_contig70418.18099.1 vs. uniprot
Match: D8FU89_9CYAN (Uncharacterized protein n=1 Tax=Kamptonema sp. PCC 6506 TaxID=272129 RepID=D8FU89_9CYAN) HSP 1 Score: 145 bits (367), Expect = 7.310e-37 Identity = 81/201 (40.30%), Postives = 123/201 (61.19%), Query Frame = 1
Query: 1 MARLGPGARLTNLAAELKKKGVTIPHGECPEVCIGGHVQTGSFGHLLRSYGLALDHVTSFDIVL-ELNGRVSNHTIKRPSKEVDEKSSIEDRIYWGVLGGGPGSFGVITEIEFECMRDAAHRFSRGYNGVYRYTKNSFEEAMGVVQRRTQQVVQDRTGPLADGALSKDCDLMITAMTNSGDLQGGTFKPSVIVVEMVHGNI 600
+ +GP +LT LA K++ +TIPHGECP V IGGH QTG +GHL+R++GLALD+V +FDIVL + N R H + S DE+ ++ I+WGVLGG GSFG++T F+ ++ + S GY + Y K+ F++ M +VQ ++ + G L+ D D M+T + ++ +Q F P V++VE V+G+I
Sbjct: 515 IVEVGPAVKLTTLADRFKQEKITIPHGECPMVAIGGHAQTGGYGHLVRNFGLALDYVEAFDIVLADGNLRTVTHPVNGSSPSSDEEK-LDREIFWGVLGGNAGSFGIVTSYTFKYIKASDRPNSYGYTALGMYRKSRFQKMMKLVQAWSKDIEA--------GTLTADFDFMMT-VKSTDKIQ---FFP-VLLVEAVYGDI 701 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig70418.18099.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig70418.18099.1 >prot_Ecto-sp13_S_contig70418.18099.1 ID=prot_Ecto-sp13_S_contig70418.18099.1|Name=mRNA_Ecto-sp13_S_contig70418.18099.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=200bp MARLGPGARLTNLAAELKKKGVTIPHGECPEVCIGGHVQTGSFGHLLRSYback to top mRNA from alignment at Ecto-sp13_S_contig70418:72..671- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig70418.18099.1 ID=mRNA_Ecto-sp13_S_contig70418.18099.1|Name=mRNA_Ecto-sp13_S_contig70418.18099.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=600bp|location=Sequence derived from alignment at Ecto-sp13_S_contig70418:72..671- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig70418:72..671- >mRNA_Ecto-sp13_S_contig70418.18099.1 ID=mRNA_Ecto-sp13_S_contig70418.18099.1|Name=mRNA_Ecto-sp13_S_contig70418.18099.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=600bp|location=Sequence derived from alignment at Ecto-sp13_S_contig70418:72..671- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |