prot_Ecto-sp13_S_contig7022.18071.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7022.18071.1
Unique Nameprot_Ecto-sp13_S_contig7022.18071.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length45
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7022.18071.1 vs. uniprot
Match: D7G4V6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V6_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 4.600e-8
Identity = 28/31 (90.32%), Postives = 28/31 (90.32%), Query Frame = 0 
Query:    1 PLTKARVTVSSGRVQFYSSSINITPQVGAAE 31
            PLTKARVTVSSGRVQFYSSSINITPQV   E
Sbjct:  186 PLTKARVTVSSGRVQFYSSSINITPQVPEGE 216
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BLAST of mRNA_Ecto-sp13_S_contig7022.18071.1 vs. uniprot
Match: A0A6H5JEL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL4_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 3.560e-7
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0 
Query:    1 PLTKARVTVSSGRVQFYSSSINITPQV 27
            PLTKARVTVSSGRVQFYSSSINITPQ+
Sbjct:  266 PLTKARVTVSSGRVQFYSSSINITPQL 292
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7022.18071.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4V6_ECTSI4.600e-890.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEL4_9PHAE3.560e-796.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7022contigEcto-sp13_S_contig7022:833..967 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7022.18071.1mRNA_Ecto-sp13_S_contig7022.18071.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7022 833..1144 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7022.18071.1 ID=prot_Ecto-sp13_S_contig7022.18071.1|Name=mRNA_Ecto-sp13_S_contig7022.18071.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=45bp
PLTKARVTVSSGRVQFYSSSINITPQVGAAEGPVRFLLLPSTLP*
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