prot_Ecto-sp13_S_contig7.18025.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7.18025.1
Unique Nameprot_Ecto-sp13_S_contig7.18025.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length189
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7.18025.1 vs. uniprot
Match: D7FHI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI9_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 8.070e-15
Identity = 73/186 (39.25%), Postives = 78/186 (41.94%), Query Frame = 0 
Query:    1 HPDDIPELIYTKFGTVTKTGSNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDCGVAPMEVSDDDIASDFGDFGGDFGGGERSDGDVDDXXXXXXXXXXXXXXXXXAPSPTYHASSIP------SSPDTGKQQEDLDDERDALPLSGGGVRTSARRRHPSRFRVECPVFHRFPGRRESWRQGQ 180
            +PD+IPEL YT  GTV  TGSNI                              G DCGVAPM VSDDDIA      GGDFGG   SDGDVD XX           XXXX                   +PD         +ER   P   G V T +          ECPVF RFPGRRE W QGQ
Sbjct:   11 NPDNIPELAYTTKGTVRVTGSNIPKSNGHGGGGKLTAGGAGGR----------GSDCGVAPMGVSDDDIA------GGDFGGXXSSDGDVDXXXGSAASTSSPTNXXXXXXXXXXXXXXXXXXXXXXGTPDA--------NERQVAPAFDGAVPTGS----------ECPVFRRFPGRRERWWQGQ 162
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7.18025.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHI9_ECTSI8.070e-1539.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7contigEcto-sp13_S_contig7:15567..16759 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7.18025.1mRNA_Ecto-sp13_S_contig7.18025.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7 15567..16759 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7.18025.1 ID=prot_Ecto-sp13_S_contig7.18025.1|Name=mRNA_Ecto-sp13_S_contig7.18025.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=189bp
HPDDIPELIYTKFGTVTKTGSNININGGSGGGGGRSGSRGGGRGRGNDDD
GAGGGDCGVAPMEVSDDDIASDFGDFGGDFGGGERSDGDVDDGDDSAAST
SSSTSSTESAPSPTYHASSIPSSPDTGKQQEDLDDERDALPLSGGGVRTS
ARRRHPSRFRVECPVFHRFPGRRESWRQGQGQGQGQGQG
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