prot_Ecto-sp13_S_contig69512.17952.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig69512.17952.1
Unique Nameprot_Ecto-sp13_S_contig69512.17952.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length236
Homology
BLAST of mRNA_Ecto-sp13_S_contig69512.17952.1 vs. uniprot
Match: A0A6H5J9C5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C5_9PHAE)

HSP 1 Score: 213 bits (543), Expect = 1.490e-62
Identity = 112/236 (47.46%), Postives = 155/236 (65.68%), Query Frame = 0
Query:    1 SFTECAIAAHLRAQGKLVLCAASTGIAALILPGGLTAHSTFKLPFGDAAVEGSVCNVEAESERAHVLKNASLIIWDEIVMSGKYSPEALDLTLKDLLKNDRPFGGKCVLMSGDWRQVAPVLKLGTPSEIVEHALLSSHLWQNVKRFRLTTSMRDKEDLPYAQTVLAIGEGAIPPIALEDGTAVIPLSHTITNTDGTQQSCTIEGITDFTHLVDRIYPDLLSVDHNCYSDRGILAPT 236
            +FTE  +A+ LR + K+VL  ASTGIAAL LPGG TAHS FKLP  D      VCN+ ++++RA +++ ++LIIWDE+ M+ +Y  EALD TLKDL+  D+PFGGK +L SGDWRQ  P++K   P++ V+ A +SS LW+ V RFRL  S RDKED  YA  V +IGEG+ P + + DG+ + PL++   + + T     +   TDF  L+  +YPDL S     ++ R ILA T
Sbjct:   11 TFTEKCLASRLRGEDKVVLIVASTGIAALQLPGGWTAHSMFKLPMDDNLTPSCVCNISSQTQRAELIRQSNLIIWDELPMTHRYCVEALDRTLKDLMAVDQPFGGKTILFSGDWRQTGPIVKNAAPTDTVDAAFISSPLWKGVMRFRLNKSQRDKEDPQYASFVRSIGEGSRPTVTMSDGSKLTPLNNH--DNEDTANHFQLRYTTDFDELLRFVYPDL-SQQSRIWNTRAILATT 243          
BLAST of mRNA_Ecto-sp13_S_contig69512.17952.1 vs. uniprot
Match: A0A6H5JNR7_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNR7_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 1.100e-53
Identity = 104/232 (44.83%), Postives = 142/232 (61.21%), Query Frame = 0
Query:    1 SFTECAIAAHLRAQGKLVLCAASTGIAALILPGGLTAHSTFKLPFGDAAVEGSVCNVEAESERAHVLKNASLIIWDEIVMSGKYSPEALDLTLKDLLKNDRPFGGKCVLMSGDWRQVAPVLKLGTPSEIVEHALLSSHLWQNVKRFRLTTSMRDKEDLPYAQTVLAIGEGAIPPIALEDGTAVIPLSHTITNTDGTQQSCTIEGITDFTHLVDRIYPDLLSVDHNCYSDRGI 232
            ++TE  + A LR+  KLVLC ASTGIA L LPGG TAHS FKLP  +  V G++CN+ AES+RA VL+   LI+WDEI MS ++S EAL+LTL+DL+ ND   GGK VL+SGD RQ+ PV+K G P+E ++ +L+SS LW +V+R RLT S R +     A T              +DG   +PL++     D  +    I+    F  L+D +Y D+L+ D   +  R I
Sbjct:   11 TYTESILCARLRSMSKLVLCVASTGIAGLQLPGGWTAHSMFKLPLEEKNVSGAMCNISAESQRAEVLRKCDLIVWDEIPMSHRFSVEALNLTLQDLMGNDNIMGGKTVLLSGDLRQIGPVVKHGGPAETIDASLISSPLWPHVQRMRLTISQRTQ-----AHTTT------------DDGIDAVPLAYIHEVPDSPKDQFFIDNTDSFEELIDFVYQDILTADPTDFKARAI 225          
BLAST of mRNA_Ecto-sp13_S_contig69512.17952.1 vs. uniprot
Match: A0A6H5JZJ6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ6_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 1.300e-53
Identity = 107/251 (42.63%), Postives = 149/251 (59.36%), Query Frame = 0
Query:    1 SFTECAIAAHLRAQGKLVLCAASTGIAALILPGGLTAHSTFKLPFGDAAVEGSVCNVEAESERAHVLKNASLIIWDEIVMSGKYSPEALDLTLKDLLKNDRPFGGKCVLMSGDWRQVAPVLKLGTPSEIVEHALLSSHLWQNVKRFRLTTSMRDKEDLPYAQTVLA------------IGEGAIPPIALEDGTAVIPLSHTIT---NTDGTQQSCTIEGITDFTHLVDRIYPDLLSVDHNCYSDRGILAPT 236
            ++TE  + A LR+  KLVLC ASTGIA L LPGG TAHS FKLP  D  V G++CN+ AES+RA VL+   LI+WDEI MS ++S EAL+LTL+DL+ ND   GGK VL+SGD RQ+ P +K G P+  ++ +L+SS LW +V+R RLT S R +++  Y +   +             G G        DG   +PL++ +     TD  +    I+    F  L+D +Y D+L+ D   +  R IL+ T
Sbjct:  326 TYTESILCARLRSMSKLVLCVASTGIAGLQLPGGWTAHSMFKLPLEDKNVSGAMCNISAESQRAEVLRKCDLIVWDEIPMSHRFSVEALNLTLQDLMGNDNIMGGKTVLLSGDLRQIGPFIKHGGPAGTIDASLISSPLWPHVQRMRLTISQRHRKNAAYVRCFCSKCRYVGMSVCXXXGIGTQAHTTANDGIDAVPLAYRLFMKFRTDSPKDQFVIDNTDSFEELIDFVYQDILTADPTDFKARAILSST 576          
BLAST of mRNA_Ecto-sp13_S_contig69512.17952.1 vs. uniprot
Match: A0A6H5JVN5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN5_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 1.050e-50
Identity = 104/237 (43.88%), Postives = 144/237 (60.76%), Query Frame = 0
Query:    1 SFTECAIAAHLRAQGKLVLCAASTGIAALILPGGLTAHSTFKLPFGDAAVEGSVCNVEAESERAHVLKNASLIIWDEIVMSGKYSPEALDLTLKDLLKNDRPFGGKCVLMSGDWRQVAPVLKLGTPSEI-VEHALLSSHLWQNVKRFRLTTSMRDKEDLPYAQTVLAIGEGAIPPIALEDGTAVIPLSHTITNTDGTQQSCTIEGITDFTHLVDRIYPDLLSVDHNCYSDRGILAPT 236
            S TE  IAA LR     VL  ASTGIAAL LPGG TAHS FKLP  +  V+G+ C++++ES+RA +++  + II+DE+ M+ +   E L+ TL+D+ +++  +GG  +  SGDWRQ  PV    TP+E  VE + +SS LW   KR RLT S RD+ED  YA  V +IGE   P     DG   +PLS+T  +   T    +++  TDF  L++ +YPD+   D    +DR ILA T
Sbjct:   55 SHTEKVIAARLREGFTAVLIVASTGIAALQLPGGWTAHSMFKLPLNEKLVDGAFCDIKSESQRAELIRKRTFIIFDELPMTHRCCIETLERTLRDIRRSEALYGGITICFSGDWRQCGPVAPFATPAETTVEASFISSDLWPKTKRMRLTMSQRDEEDPAYASFVRSIGEKIHPTTTFSDGAKRVPLSNT--HDTSTTDHFSLQYTTDFNDLINFVYPDIHE-DARHLNDRAILATT 288          
BLAST of mRNA_Ecto-sp13_S_contig69512.17952.1 vs. uniprot
Match: A0A6H5L0I5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I5_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 4.110e-50
Identity = 94/167 (56.29%), Postives = 122/167 (73.05%), Query Frame = 0
Query:    1 SFTECAIAAHLRAQGKLVLCAASTGIAALILPGGLTAHSTFKLPFGDAAVEGSVCNVEAESERAHVLKNASLIIWDEIVMSGKYSPEALDLTLK-DLLKNDRPFGGKCVLMSGDWRQVAPVLKLGTPSEIVEHALLSSHLWQNVKRFRLTTSMRDKEDLPYAQTVLA 166
            ++TE  + A LR+  KLVLC ASTGIA L LPGG TAHS FKLP  +  V G++CN+ AES+RA VL+   LI+WDEI MS ++S EAL+LTL+ DLL ND   GGK VL+SGD RQ+ PV+K G P+E ++ +L+SS LW +V+R RLT S RD+ED  YA  +L+
Sbjct:  489 TYTESILCARLRSMSKLVLCVASTGIAGLQLPGGWTAHSMFKLPLEEKNVSGAMCNISAESQRAEVLRKCDLIVWDEIPMSHRFSVEALNLTLQADLLGNDNIMGGKTVLLSGDLRQIGPVVKHGGPAETIDASLISSPLWPHVQRMRLTISQRDREDAAYASAILS 655          
BLAST of mRNA_Ecto-sp13_S_contig69512.17952.1 vs. uniprot
Match: A0A6H5K5W5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W5_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 1.040e-46
Identity = 85/196 (43.37%), Postives = 120/196 (61.22%), Query Frame = 0
Query:   41 FKLPFGDAAVEGSVCNVEAESERAHVLKNASLIIWDEIVMSGKYSPEALDLTLKDLLKNDRPFGGKCVLMSGDWRQVAPVLKLGTPSEIVEHALLSSHLWQNVKRFRLTTSMRDKEDLPYAQTVLAIGEGAIPPIALEDGTAVIPLSHTITNTDGTQQSCTIEGITDFTHLVDRIYPDLLSVDHNCYSDRGILAPT 236
            FKLP  DA     VCN+  +++RA +++ + LIIWDE+ M+ +Y  EALD T+KDL K D+ FGGK +L SGDWRQ  P++K G+ ++ V+ A +SS LW NV R +LT S RD+ED  Y+  V AIGEG  P  A+ D   +   +H   N D  Q    ++  T+F  L + +YPD+   D   ++ R ILA T
Sbjct:    2 FKLPMDDALTPTCVCNINTQTQRAELIRKSDLIIWDELPMTHRYCIEALDRTMKDLTKIDKLFGGKTILFSGDWRQTGPIVKNGSATDTVDAAFISSVLWTNVHRMKLTKSQRDREDPQYSAFVRAIGEGTHPTTAIHDSNVIALNNH---NVDDPQDHFQLQYTTEFNELFNFVYPDVTQ-DSRLWNKRAILATT 193          
BLAST of mRNA_Ecto-sp13_S_contig69512.17952.1 vs. uniprot
Match: UPI001016A063 (ATP-dependent DNA helicase PIF1-like n=4 Tax=Vigna unguiculata TaxID=3917 RepID=UPI001016A063)

HSP 1 Score: 165 bits (418), Expect = 1.970e-43
Identity = 91/229 (39.74%), Postives = 140/229 (61.14%), Query Frame = 0
Query:    9 AHLRAQGKLVLCAASTGIAALILPGGLTAHSTFKLPFGDAAVEGSVCNVEAESERAHVLKNASLIIWDEIVMSGKYSPEALDLTLKDLLKNDRPFGGKCVLMSGDWRQVAPVLKLGTPSEIVEHALLSSHLWQNVKRFRLTTSMRDKEDLPYAQTVLAIGEGAIPPIALEDGTAVIPLSHTITNTDGTQQSCTIEGITDFTHLVDRIYPDLL--SVDHNCYSDRGILAP 235
            AH R+ G+++L  AS+GIAA +LPGG T HS FK+P    A  GS C++  +S+ A ++K A  IIWDE  M  KY  EALD TLKD+L +D PFGGK +++ GD+RQV PV++ GT ++++   +++SHLW N K   L  +MR  +D  +A+ ++ IG+G I P  ++D   ++ +          Q + + EG T   HL+ + +P L   + D +  ++R IL P
Sbjct:  340 AHCRSNGQIILATASSGIAATLLPGGRTTHSRFKIPINVEA--GSFCSISKQSDLAKLIKIAKAIIWDEAPMINKYVLEALDRTLKDILDSDAPFGGKVIILGGDFRQVLPVIQKGTKAQMISSCIINSHLWSNTKILHLQQNMRSLQDHNFAEYLMRIGDG-IEPTQVDD---MVKIPQ--------QLAISWEGETSIQHLIHQTFPQLQFHTWDASYMAERAILTP 554          
BLAST of mRNA_Ecto-sp13_S_contig69512.17952.1 vs. uniprot
Match: UPI001016F80A (uncharacterized protein LOC114172255 n=4 Tax=Vigna unguiculata TaxID=3917 RepID=UPI001016F80A)

HSP 1 Score: 162 bits (409), Expect = 6.250e-42
Identity = 90/229 (39.30%), Postives = 140/229 (61.14%), Query Frame = 0
Query:    9 AHLRAQGKLVLCAASTGIAALILPGGLTAHSTFKLPFGDAAVEGSVCNVEAESERAHVLKNASLIIWDEIVMSGKYSPEALDLTLKDLLKNDRPFGGKCVLMSGDWRQVAPVLKLGTPSEIVEHALLSSHLWQNVKRFRLTTSMRDKEDLPYAQTVLAIGEGAIPPIALEDGTAVIPLSHTITNTDGTQQSCTIEGITDFTHLVDRIYPDLL--SVDHNCYSDRGILAP 235
            AH R+ G+++L  AS+GIAA +LPGG TAHS FK+P    A  GS C++  +S+ A ++K A  IIWDE  M  +Y  EALD TLKD+L +D PFGGK +++ GD+RQV PV++ GT ++++   +++SHLW N K   L  +MR  +D  +A+ ++ IG+G I P  ++D   ++ +          Q + + EG T   HL+ + +  L   + D +  ++R IL P
Sbjct:  902 AHCRSNGQIILATASSGIAATLLPGGRTAHSRFKIPINIEA--GSFCSISKQSDLAKLIKIAKAIIWDEAPMINRYVLEALDRTLKDILDSDAPFGGKVIILGGDFRQVLPVVQKGTKAQMISACIINSHLWSNTKILHLQQNMRSLQDHNFAEYLMRIGDG-IEPTQVDD---MVKIPQ--------QLAISWEGETSIQHLIHQTFSQLQFHTWDASYMAERAILTP 1116          
BLAST of mRNA_Ecto-sp13_S_contig69512.17952.1 vs. uniprot
Match: A0A8D8TY44_9HEMI (ATP-dependent DNA helicase (Fragment) n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8TY44_9HEMI)

HSP 1 Score: 150 bits (380), Expect = 1.240e-41
Identity = 84/226 (37.17%), Postives = 133/226 (58.85%), Query Frame = 0
Query:    7 IAAHLRAQGKLVLCAASTGIAALILPGGLTAHSTFKLPFGDAAVEGSVCNVEAESERAHVLKNASLIIWDEIVMSGKYSPEALDLTLKDLLKNDRPFGGKCVLMSGDWRQVAPVLKLGTPSEIVEHALLSSHLWQNVKRFRLTTSMRDKEDLPYAQTVLAIGEGAIPPIALEDGTAVIPLSHTITNTDGTQQSCTIEGITDFTHLVDRIYPDLLSVDHNCYSDRGI 232
            + ++LR+ G +VLC A++GIAAL   GG+TAHS FKLP  D +      NV A +ER  ++++A+LII+DE+ M+ K     LD +LK L+  D P GGK  +  GD+RQ+ PV++ G PS++V+ +  +S+LW  +K   LT ++R ++D+ Y + +  +G+G IP   L  G  +IPL               +  +TD   L+D IYP  +  D +  ++R I
Sbjct:   24 VTSYLRSLGHIVLCTATSGIAALNHEGGITAHSMFKLPL-DVSDPLVTWNVSASTERGALIRSAALIIFDEVAMAHKNLLHCLDRSLKLLMHCDEPMGGKVFVALGDFRQIGPVIRFGQPSDVVQASFRNSYLWPLMKVISLTAALRTRDDMEYTEFLARVGDGLIPS-TLVSGQQLIPLDR-------------MRYVTDVNELIDLIYPSAILTDSDLCAERAI 234          
BLAST of mRNA_Ecto-sp13_S_contig69512.17952.1 vs. uniprot
Match: UPI001E696115 (LOW QUALITY PROTEIN: ATP-dependent DNA helicase PIF1-like n=1 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E696115)

HSP 1 Score: 156 bits (394), Expect = 4.990e-41
Identity = 90/229 (39.30%), Postives = 135/229 (58.95%), Query Frame = 0
Query:    9 AHLRAQGKLVLCAASTGIAALILPGGLTAHSTFKLPFGDAAVEGSVCNVEAESERAHVLKNASLIIWDEIVMSGKYSPEALDLTLKDLLKNDRPFGGKCVLMSGDWRQVAPVLKLGTPSEIVEHALLSSHLWQNVKRFRLTTSMRDKEDLPYAQTVLAIGEGAIPPIALEDGTAVIPLSHTITNTDGTQQSCTIEGITDFTHLVDRIYP--DLLSVDHNCYSDRGILAP 235
            A LR++G++VL  AS+GIAA +LPGG TAHS FKLPF   A  GS C++  ++  A++L+ A+ IIWDE  M+ +Y  EALD +LKD+L ++ PFGGK ++M GD+RQ+ PV+  GT ++ +   ++ S LW + K  RL  +MR   D  +A  ++ IG+G + P   +D   + P           Q +   EG      L+D I+P  +L   D +  + R IL P
Sbjct:  109 ATLRSRGQIVLATASSGIAATLLPGGRTAHSRFKLPF--EATPGSYCDIRKQTHLANLLRVAAAIIWDEAPMTNRYCLEALDKSLKDVLNSNAPFGGKVMIMGGDFRQILPVIPKGTKAQTISACIIKSQLWAHTKVLRLRQNMRSMHDHEFASFLMRIGDG-VEPTKPDDMVKIPP-----------QIAIPWEGEHSIQVLIDHIFPXLELHGXDASYMTQRAILTP 323          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig69512.17952.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J9C5_9PHAE1.490e-6247.46ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JNR7_9PHAE1.100e-5344.83ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JZJ6_9PHAE1.300e-5342.63ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JVN5_9PHAE1.050e-5043.88ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5L0I5_9PHAE4.110e-5056.29ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K5W5_9PHAE1.040e-4643.37ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
UPI001016A0631.970e-4339.74ATP-dependent DNA helicase PIF1-like n=4 Tax=Vigna... [more]
UPI001016F80A6.250e-4239.30uncharacterized protein LOC114172255 n=4 Tax=Vigna... [more]
A0A8D8TY44_9HEMI1.240e-4137.17ATP-dependent DNA helicase (Fragment) n=1 Tax=Caco... [more]
UPI001E6961154.990e-4139.30LOW QUALITY PROTEIN: ATP-dependent DNA helicase PI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..167
e-value: 9.5E-15
score: 56.3
NoneNo IPR availablePANTHERPTHR10492:SF71coord: 6..232
NoneNo IPR availablePANTHERPTHR10492UNCHARACTERIZEDcoord: 6..232
NoneNo IPR availableTMHMMTMhelixcoord: 17..39
IPR010285DNA helicase Pif1-likePFAMPF05970PIF1coord: 6..236
e-value: 4.8E-47
score: 160.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig69512contigEcto-sp13_S_contig69512:2..709 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig69512.17952.1mRNA_Ecto-sp13_S_contig69512.17952.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig69512 2..709 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig69512.17952.1 ID=prot_Ecto-sp13_S_contig69512.17952.1|Name=mRNA_Ecto-sp13_S_contig69512.17952.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=236bp
SFTECAIAAHLRAQGKLVLCAASTGIAALILPGGLTAHSTFKLPFGDAAV
EGSVCNVEAESERAHVLKNASLIIWDEIVMSGKYSPEALDLTLKDLLKND
RPFGGKCVLMSGDWRQVAPVLKLGTPSEIVEHALLSSHLWQNVKRFRLTT
SMRDKEDLPYAQTVLAIGEGAIPPIALEDGTAVIPLSHTITNTDGTQQSC
TIEGITDFTHLVDRIYPDLLSVDHNCYSDRGILAPT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010285DNA_helicase_pif1-like
IPR027417P-loop_NTPase