prot_Ecto-sp13_S_contig69276.17920.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig69276.17920.1
Unique Nameprot_Ecto-sp13_S_contig69276.17920.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length63
Homology
BLAST of mRNA_Ecto-sp13_S_contig69276.17920.1 vs. uniprot
Match: D7FT61_ECTSI (CULLIN_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT61_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 3.490e-29
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
Query:    1 RHLTEAAVVRIMKARKSLRHNDLVAEVTRQLSSRFVPSPTVIKSRIESLIDREYLERDRNDRR 63
            RHLTEAAVVRIMKARKSLRHNDLVAEVTRQLSSRFVPSPTVIKSRIESLIDREYLERDRNDRR
Sbjct:  669 RHLTEAAVVRIMKARKSLRHNDLVAEVTRQLSSRFVPSPTVIKSRIESLIDREYLERDRNDRR 731          
BLAST of mRNA_Ecto-sp13_S_contig69276.17920.1 vs. uniprot
Match: A0A7S1E356_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E356_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 2.690e-23
Identity = 49/63 (77.78%), Postives = 54/63 (85.71%), Query Frame = 0
Query:    1 RHLTEAAVVRIMKARKSLRHNDLVAEVTRQLSSRFVPSPTVIKSRIESLIDREYLERDRNDRR 63
            RHL EAA+VRIMKARKSL HNDL+AEVT+QLS RFVP+P  IK RIESLI+REYLER   DRR
Sbjct:   60 RHLVEAAIVRIMKARKSLHHNDLIAEVTKQLSHRFVPTPQFIKKRIESLIEREYLERREEDRR 122          
BLAST of mRNA_Ecto-sp13_S_contig69276.17920.1 vs. uniprot
Match: A0A7S2XMU5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMU5_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 9.620e-22
Identity = 49/63 (77.78%), Postives = 56/63 (88.89%), Query Frame = 0
Query:    1 RHLTEAAVVRIMKARKSLRHNDLVAEVTRQLSSRFVPSPTVIKSRIESLIDREYLERDRNDRR 63
            RHL EAA+VRIMKARKSL HN+L+AEVT+QLS RFVP+P  IK RIESLI+REYLERD NDR+
Sbjct:  698 RHLVEAAIVRIMKARKSLNHNELIAEVTKQLSVRFVPTPQFIKKRIESLIEREYLERDENDRK 760          
BLAST of mRNA_Ecto-sp13_S_contig69276.17920.1 vs. uniprot
Match: A0A6U2RFR6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2RFR6_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.790e-21
Identity = 50/63 (79.37%), Postives = 55/63 (87.30%), Query Frame = 0
Query:    1 RHLTEAAVVRIMKARKSLRHNDLVAEVTRQLSSRFVPSPTVIKSRIESLIDREYLERDRNDRR 63
            RHL EA++VRIMKARKSL HNDL+AEV+RQLS RFVPSP  IK RIESLI+REYLERD  DRR
Sbjct:  702 RHLVEASIVRIMKARKSLHHNDLIAEVSRQLSVRFVPSPPFIKQRIESLIEREYLERDDRDRR 764          
BLAST of mRNA_Ecto-sp13_S_contig69276.17920.1 vs. uniprot
Match: A0A7S2BUF6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BUF6_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 2.420e-21
Identity = 49/63 (77.78%), Postives = 56/63 (88.89%), Query Frame = 0
Query:    1 RHLTEAAVVRIMKARKSLRHNDLVAEVTRQLSSRFVPSPTVIKSRIESLIDREYLERDRNDRR 63
            RHL EAA+VRIMKARK+LRHNDL+AEVTRQL+SRFV  P  IK RIESLI+REYLER+ +DRR
Sbjct:  556 RHLVEAAIVRIMKARKTLRHNDLIAEVTRQLTSRFVAEPAFIKKRIESLIEREYLERETDDRR 618          
BLAST of mRNA_Ecto-sp13_S_contig69276.17920.1 vs. uniprot
Match: A0A7S2R226_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R226_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 3.340e-21
Identity = 49/63 (77.78%), Postives = 55/63 (87.30%), Query Frame = 0
Query:    1 RHLTEAAVVRIMKARKSLRHNDLVAEVTRQLSSRFVPSPTVIKSRIESLIDREYLERDRNDRR 63
            RHL EAA+VRIMKARK+L HNDL+AEVT+QLS RFVPSP  IK RIESLI+REYLER  +DRR
Sbjct:  296 RHLVEAAIVRIMKARKTLHHNDLIAEVTKQLSVRFVPSPQFIKKRIESLIEREYLERKPDDRR 358          
BLAST of mRNA_Ecto-sp13_S_contig69276.17920.1 vs. uniprot
Match: A0A7S2PQ28_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PQ28_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 6.120e-21
Identity = 49/63 (77.78%), Postives = 53/63 (84.13%), Query Frame = 0
Query:    1 RHLTEAAVVRIMKARKSLRHNDLVAEVTRQLSSRFVPSPTVIKSRIESLIDREYLERDRNDRR 63
            RHL EAA+VRIMKARK L HNDLVAEVTRQLS RFVP P  +K R+ESLI+REYLERD  DRR
Sbjct:  532 RHLLEAAIVRIMKARKVLNHNDLVAEVTRQLSGRFVPPPQFVKKRVESLIEREYLERDEADRR 594          
BLAST of mRNA_Ecto-sp13_S_contig69276.17920.1 vs. uniprot
Match: A0A7S2W0A7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0A7_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 6.230e-21
Identity = 49/63 (77.78%), Postives = 56/63 (88.89%), Query Frame = 0
Query:    1 RHLTEAAVVRIMKARKSLRHNDLVAEVTRQLSSRFVPSPTVIKSRIESLIDREYLERDRNDRR 63
            R L EA VVRIMKARK+L+HNDL+AEVTRQLSSRF+P+P  IK RIESLI+REYLERD+ DRR
Sbjct:  668 RLLVEAGVVRIMKARKTLQHNDLIAEVTRQLSSRFMPNPAFIKKRIESLIEREYLERDKTDRR 730          
BLAST of mRNA_Ecto-sp13_S_contig69276.17920.1 vs. uniprot
Match: A0A7S3PYP2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYP2_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 6.230e-21
Identity = 48/63 (76.19%), Postives = 54/63 (85.71%), Query Frame = 0
Query:    1 RHLTEAAVVRIMKARKSLRHNDLVAEVTRQLSSRFVPSPTVIKSRIESLIDREYLERDRNDRR 63
            RHL EAA VRIMKARK+L+HNDL+AEVT+QLSSRFVPSP  IK RI  LI+R+YLERD ND R
Sbjct:  699 RHLVEAATVRIMKARKTLKHNDLIAEVTKQLSSRFVPSPQFIKKRIAGLIERDYLERDENDHR 761          
BLAST of mRNA_Ecto-sp13_S_contig69276.17920.1 vs. uniprot
Match: A0A7R9U657_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U657_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.960e-20
Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 0
Query:    1 RHLTEAAVVRIMKARKSLRHNDLVAEVTRQLSSRFVPSPTVIKSRIESLIDREYLERDRNDRR 63
            +HL EA +VRIMKARK+LRHN+LV EVTRQL+ RF P P +IK R+ESLI+REYLERD NDRR
Sbjct:  692 KHLVEAHIVRIMKARKTLRHNELVGEVTRQLAQRFSPDPVLIKKRVESLIEREYLERDANDRR 754          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig69276.17920.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT61_ECTSI3.490e-29100.00CULLIN_2 domain-containing protein n=2 Tax=Ectocar... [more]
A0A7S1E356_9STRA2.690e-2377.78Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S2XMU5_9STRA9.620e-2277.78Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6U2RFR6_9STRA1.790e-2179.37Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2BUF6_9STRA2.420e-2177.78Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2R226_9STRA3.340e-2177.78Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2PQ28_9STRA6.120e-2177.78Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2W0A7_9STRA6.230e-2177.78Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3PYP2_9STRA6.230e-2176.19Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7R9U657_9STRA2.960e-2073.02Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019559Cullin protein, neddylation domainSMARTSM00884Cullin_Nedd8_2coord: 1..63
e-value: 2.0E-28
score: 110.4
IPR019559Cullin protein, neddylation domainPFAMPF10557Cullin_Nedd8coord: 1..61
e-value: 8.3E-29
score: 99.4
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..63
e-value: 2.4E-27
score: 96.4
NoneNo IPR availablePANTHERPTHR11932:SF126CULLIN-3coord: 2..63
NoneNo IPR availablePANTHERPTHR11932CULLINcoord: 2..63
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 2..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig69276contigEcto-sp13_S_contig69276:439..627 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig69276.17920.1mRNA_Ecto-sp13_S_contig69276.17920.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig69276 439..627 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig69276.17920.1 ID=prot_Ecto-sp13_S_contig69276.17920.1|Name=mRNA_Ecto-sp13_S_contig69276.17920.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=63bp
RHLTEAAVVRIMKARKSLRHNDLVAEVTRQLSSRFVPSPTVIKSRIESLI
DREYLERDRNDRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019559Cullin_neddylation_domain
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf