prot_Ecto-sp13_S_contig6921.17915.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6921.17915.1
Unique Nameprot_Ecto-sp13_S_contig6921.17915.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length346
Homology
BLAST of mRNA_Ecto-sp13_S_contig6921.17915.1 vs. uniprot
Match: D7FY65_ECTSI (AAA_12 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY65_ECTSI)

HSP 1 Score: 616 bits (1588), Expect = 2.990e-216
Identity = 313/343 (91.25%), Postives = 324/343 (94.46%), Query Frame = 0
Query:    1 VFGNEARLGPHSKNFTMAGRMANDAELLFWRDARATWTKHLKVANAASWSGLHLTNFPGIARLLALEQESLRSTGTGKKHDKLRRSGRAAGKSAFALERVLKDNFYRRLENGSRGQRLMLRQLKALDKWVRLLSQGASRVASLLMRLEGLTRFRIFTETRVLICTVDSTERMVVSSTFYDGKLKTAEELRLTRMSRQPCKWVHVSGGEAKHQGRGYSNHLEIPKVMEEVRASMHRYGREADIRVITFYNMQKRDLEREFKDQPDIKNVRIASVDSCQGSDADVVVISTVRSGGVGYRLSGFITDRRRVNVAISRAKEECIIVGDKHTLRSSSGAMWRSVADHF 343
            VFGNEARLGPHSKNFTMAGRMANDAELLFWRDAR TWTKHLK A A SWS LHL NFPG+ARL ALEQESL+STGTGKKH +LRRSGRAAGK AFAL+RVLK NFY+RL NGS  QRLML QLKALDKWVRLLS+GASRVASLLMRLEGLTRFRIFTETRVLICTVDSTERMVVSSTFYDGKLKTAEELRLTRMS QP KWVHVSGGE KHQGRGYSNHLEIPKV++EVRASMHRYGREADIRVITFYNMQKRDLEREFKD+PDIKNVRIASVDSCQGSDADVVVISTVRSGGVGY+LSGF+TDRRRVNVAISRAKEECIIVGDKHTLRS  GAMWRSVADHF
Sbjct:  348 VFGNEARLGPHSKNFTMAGRMANDAELLFWRDARETWTKHLKSAQAVSWSRLHLPNFPGVARLFALEQESLKSTGTGKKHHQLRRSGRAAGKWAFALKRVLKANFYKRLVNGSLAQRLMLHQLKALDKWVRLLSEGASRVASLLMRLEGLTRFRIFTETRVLICTVDSTERMVVSSTFYDGKLKTAEELRLTRMSHQPSKWVHVSGGETKHQGRGYSNHLEIPKVVQEVRASMHRYGREADIRVITFYNMQKRDLEREFKDKPDIKNVRIASVDSCQGSDADVVVISTVRSGGVGYKLSGFMTDRRRVNVAISRAKEECIIVGDKHTLRSGGGAMWRSVADHF 690          
BLAST of mRNA_Ecto-sp13_S_contig6921.17915.1 vs. uniprot
Match: A0A6H5JRT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT8_9PHAE)

HSP 1 Score: 425 bits (1093), Expect = 4.930e-141
Identity = 243/382 (63.61%), Postives = 252/382 (65.97%), Query Frame = 0
Query:    1 VFGNEARLGPHSKNFTMAGRMANDAELLFWRDARATWTKHLKVANAASWSGLHLTNFPGIARLLALEQESLRSTGTGKKHDKLRRSGRAAGKSAFALERVLKDNFYRRLENGSRGQRLMLRQLKALDKWVRLLSQGASRVASLLMRLEGLTRFRIFTETRVLICTVDSTERMV-------------------------------------------------------------------------------------------------------------VSSTFYDGKLKTAEELRLTRMSRQPCKWVHVSGGEAKHQGRGYSNHLEIPKVMEEVRASMHRYGREADIRVITFYNMQKRDLEREFKDQPDIKNVRIASV 273
            VFGNEARLG HSKNFTMAGRMANDAELLFWRDARATWTKHL+ A A SW  LHL +FPGIARLLALEQESLRSTGTG+KHDKLRRSGR AGK AFAL  VLK NFY+RLENGSR QRLMLRQL ALDKWVRLLSQGASRVASLLMRLEGLTRFRIFTETRVLICTVDSTERMV                                                                                                             VSSTFYDGKLKTAEELRLTRMS QPCKWVHVSGGE KHQGRGYSNHLEIPKV+EEVRAS+ RYG EADIRV TFYNMQKRDLER+FK QPD+K+VRI SV
Sbjct:  333 VFGNEARLGLHSKNFTMAGRMANDAELLFWRDARATWTKHLEKAKAVSWRRLHLPSFPGIARLLALEQESLRSTGTGEKHDKLRRSGRTAGKWAFALTCVLKANFYKRLENGSRAQRLMLRQLNALDKWVRLLSQGASRVASLLMRLEGLTRFRIFTETRVLICTVDSTERMVRTMEEGTREAAIAIGHELDASSCRLTLDTAIMDEAACVLEAAVPVLLALGIKNLTLVGDHRQLQPFSQVRENEAGKHHSRSLMERAIDSGRANQFLDLQYRMHPTLCQVVSSTFYDGKLKTAEELRLTRMSHQPCKWVHVSGGETKHQGRGYSNHLEIPKVVEEVRASIQRYGTEADIRVNTFYNMQKRDLERDFKHQPDMKHVRIVSV 714          
BLAST of mRNA_Ecto-sp13_S_contig6921.17915.1 vs. uniprot
Match: E1ZLN5_CHLVA (Expressed protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZLN5_CHLVA)

HSP 1 Score: 121 bits (303), Expect = 1.350e-26
Identity = 71/176 (40.34%), Postives = 98/176 (55.68%), Query Frame = 0
Query:  174 VSSTFYDGKLKTAEELRLTRMSRQPCKWVHVSGGEAKHQGRGYSNHLEIPKVMEEVRAS---MHRYG-READIRVITFYNMQKRDLEREFKDQPDIKNV---RIASVDSCQGSDADVVVISTVRS---GGVGYRLSGFITDRRRVNVAISRAKEECIIVGDKHTLRSSSGAMWRSV 339
            +S+ FY  +L TA      R   +PC+ V V G E  HQG GYSN +E  K +   R +   +   G R   I +IT YN Q+  LER    +P ++     ++ S+D+CQG +AD VV+STVR+   G     LS F  DRRRVNVA+SRA+  C++VG  +TLR      W +V
Sbjct:  566 ISAEFYADRLHTAAAAAARRALAEPCRMVQVGGKEVWHQGGGYSNPVEASKAVRVARKAAKELRELGIRHPTIYIITIYNRQRDLLERLVAKEPALRGACDCQVLSIDACQGDEADAVVVSTVRNAFCGSENQHLSSFFRDRRRVNVAMSRARHLCVVVGSLYTLRLPKARPWSAV 741          
BLAST of mRNA_Ecto-sp13_S_contig6921.17915.1 vs. uniprot
Match: A0A7S4MYX4_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4MYX4_GUITH)

HSP 1 Score: 105 bits (261), Expect = 3.160e-21
Identity = 66/172 (38.37%), Postives = 102/172 (59.30%), Query Frame = 0
Query:  174 VSSTFYDGKLKTAEELRLTRMSRQPCKWVHVSGGEAK-HQGRGYSNHLEIPKVMEEVRASMHR-YGREADIRVITFYNMQKRDLEREFKDQPDIKNVRIASVDSCQGSDADVVVISTVRSGGVGYRLSGFITDRRRVNVAISRAKEECIIVGDKHTLRSSSGAMWRSVADHF 343
            VS  FY GKLKT  E    R    P  +VHVSG E+K        N +E   V+E V+A ++     + ++ V++FYN QK  + ++   + ++ +V + SVDS QG +A+VVV+S VR+   G    GF+ DRRRVNVAISRA++  +++GD+  L  +   +W+SV  ++
Sbjct:  334 VSREFYRGKLKTDSETAQARSHPLPASFVHVSGIESKPSNSSSLMNDMEADAVLEIVQAMINSGVHTQREVVVLSFYNGQKSIISKKLL-KKNLGDVEVMSVDSMQGREAEVVVLSCVRTLAGGS--VGFLADRRRVNVAISRARQSLVVIGDEQALMQNK--LWKSVLSYY 500          
BLAST of mRNA_Ecto-sp13_S_contig6921.17915.1 vs. uniprot
Match: A0A7S0GNV1_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GNV1_MICPS)

HSP 1 Score: 98.6 bits (244), Expect = 3.880e-19
Identity = 58/147 (39.46%), Postives = 78/147 (53.06%), Query Frame = 0
Query:  195 SRQPCKWVHVSGGE-AKHQGRGYSNHLEIPKVMEEVRASMHRYGREADIRVITFYNMQKRDLEREFKDQPDIKNVRIASVDSCQGSDADVVVISTVRSGGVGYRLSGFITDRRRVNVAISRAKEECIIVGDKHTLRSSSGAMWRSVA 340
            S++   WV VSG E    +G  Y N LE+   +   R    R+G    I  +TFY  Q   L       P    V   +VD+CQGS+ D V+IST R+     R  GF++D RR+NVAISRAK +C+I+GD  T+    G  W +VA
Sbjct:   73 SKRAMVWVQVSGWEETPEEGTSYVNRLEVAATVAAARRVRERHGPRCSIAALTFYKGQYLAL---MDAMPASLGVECLTVDACQGSEFDFVLISTTRAND--RRAVGFVSDPRRINVAISRAKRQCVILGDARTMAGRPGTDWHAVA 214          
BLAST of mRNA_Ecto-sp13_S_contig6921.17915.1 vs. uniprot
Match: R1E0W5_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E0W5_EMIHU)

HSP 1 Score: 95.1 bits (235), Expect = 9.740e-18
Identity = 63/167 (37.72%), Postives = 91/167 (54.49%), Query Frame = 0
Query:  173 VVSSTFYDGKLKTAEELRLTRMSRQPCKWVHVSGGEAKHQGRGYSNHLEIPKVMEEVRASMHRYGREAD-IRVITFYNMQKRDLEREFKDQPDIKNVRIASVDSCQGSDADVVVISTVRSGGVGYRLSGFITDRRRVNVAISRAKEECIIVGDKHTLRSSSGAMWRS 338
            +VSSTFY  KL TA      R    P  +V+V+GG  + Q R   N  E  +V+      +   G   + I V++FYN Q+  LER    +  +++V + SVDS QG +ADV+++S VR+   G    GF+ D RRVNVA+SRA+E  ++ G    L      +WRS
Sbjct:  519 IVSSTFYFNKLMTAPSTARARQHPLPACFVNVTGGHEEFQERSCFNKKEAEEVVSLALHCVEYLGFSQERINVLSFYNAQRDILERMLA-RAQLEDVAVLSVDSMQGREADVIILSCVRADVAGGL--GFVADARRVNVALSRARESLVVCGSSVCLEVER--IWRS 680          
BLAST of mRNA_Ecto-sp13_S_contig6921.17915.1 vs. uniprot
Match: R1DL56_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DL56_EMIHU)

HSP 1 Score: 94.0 bits (232), Expect = 2.190e-17
Identity = 63/169 (37.28%), Postives = 91/169 (53.85%), Query Frame = 0
Query:  173 VVSSTFYDGKLKTAEELRLTRMSRQPCKWVHVSGGEAKHQGRGYSNHLEIPKVMEEVRASMHRYGREAD-IRVITFYNMQKRDLEREFKDQPDIKNVRIASVDSCQGSDADVVVISTVRSGGVGYRLSGFITDRRRVNVAISRAKEECIIVGDKHTLRSSSGAMWRSVA 340
            +VSSTFY  KL TA      R    P  +V+V+GG  + Q R   N  E  +V+      +   G   + I V++FYN Q+  LER    +  +++V + SVDS QG +ADV+++S VR+   G    GF+ D RRVNVA+SRA+E  ++ G    L      +WR  A
Sbjct:  406 IVSSTFYFNKLMTAPSTARARQHPLPACFVNVTGGHEEFQERSCFNKKEAEEVVSLALHCVEYLGFSQERINVLSFYNAQRDILERMLA-RAQLEDVAVLSVDSMQGREADVIILSCVRADVAGGL--GFVADARRVNVALSRARESLVVCGSSVCLEVER--IWRRSA 569          
BLAST of mRNA_Ecto-sp13_S_contig6921.17915.1 vs. uniprot
Match: A0A6A4YBF6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4YBF6_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 4.510e-17
Identity = 60/151 (39.74%), Postives = 90/151 (59.60%), Query Frame = 0
Query:  173 VVSSTFYDGKLKTAEELRLTRMSRQPCKWVHVSGGEAKHQGRGYSNHLEIPKVMEEVRASMHRYGREADIRVITFYNMQKRDLEREFKDQPDIKNVRIASVDSCQGSDADVVVISTVRSGGVGYRLSGFITDRRRVNVAISRAKEECIIVG 323
            VVSS  Y  KLKTA  +++ R    P +++HV+G E + +G  + N  E+ +V+E VR     +     I VI F+  Q   L+R  + +P + +V + +VD+ QG +ADVVV+S VR+ G      GF+ +R R+NVA+SRAKE   IVG
Sbjct:  747 VVSSLTYRNKLKTASTVQMARRRTTPLQFIHVNGRE-ESKGTSFLNKDEMDRVVEVVRRERTTHPT-LSINVICFHKPQYVALQRLCQAEPALASVDVVTVDAMQGREADVVVLSCVRTDGH----VGFLANRPRINVALSRAKEALYIVG 891          
BLAST of mRNA_Ecto-sp13_S_contig6921.17915.1 vs. uniprot
Match: A0A7S0L886_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L886_9EUKA)

HSP 1 Score: 90.9 bits (224), Expect = 6.940e-17
Identity = 71/210 (33.81%), Postives = 109/210 (51.90%), Query Frame = 0
Query:  122 QLKALDKWVRLLSQGASRVASLLMRL---EGLTRFRIFTETRV--LICTVDSTERMVVSSTFYDGKLKTAEELRLTRMSRQPCKWVHVSGGEAKHQGRGYSNHLEIPKVMEEVRASM-HRYGREADIRVITFYNMQKRDLEREFKDQPDIKNVRIASVDSCQGSDADVVVISTVRS-GGVGYRLS-GFITDRRRVNVAISRAKEECIIVG 323
            QL    KW    S G +   SL+ RL   +G + F +  + R+   IC        +VS++FY+ KLKTA+ +   R    P  +V V+ G    +G  + N  E   V+   +  + H       + V+TFYN Q R+L  E  +   +  + + SVDS QG + DV+++S VRS    G R+S GF+ D RR+NVA SRA+E  +++G
Sbjct:   66 QLPPFTKWKGAASSGYT--TSLMARLAHVKGASSFMLTEQYRMHPTIC-------KLVSNSFYNRKLKTADMITADRSFALPANFVDVADGLTSREGSSFVNAAEADAVVRVAQLFVRHASFAMQQLTVLTFYNAQ-RELLLERLEAAGLNEIDVVSVDSMQGREQDVIILSCVRSRSNDGSRVSLGFLNDARRINVAFSRARECLVVLG 265          
BLAST of mRNA_Ecto-sp13_S_contig6921.17915.1 vs. uniprot
Match: A0A813J659_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813J659_POLGL)

HSP 1 Score: 92.0 bits (227), Expect = 1.370e-16
Identity = 61/171 (35.67%), Postives = 92/171 (53.80%), Query Frame = 0
Query:  173 VVSSTFYDGKLKTAEELRLTRMSRQ--PCKWVHVSGGEAKHQGRGYSNHLEIPKVMEEVRASMHRYGREADIRVITFYNMQKRDLEREFKDQPDIKNVRIASVDSCQGSDADVVVISTVRSGGVGYRLSGFITDRRRVNVAISRAKEECIIVGDKHTLRSSSGAMWRSVAD 341
            VVS  FY G+L T   +   R +R+  P  W+ V G E   +   Y NH E+   ++       R G  A I ++TFY  Q   L++  +  P   NV + +VD+CQGS+ D VV+STVR+     +  GF+ D +R+NVAISR++ +  IVG ++TL       W+ V +
Sbjct: 1892 VVSDLFYAGRLVTPGSVAKARTARENRPLVWLDVQGREEAPEC-SYMNHSEVSAGVKVCARLRERAGPVASIALLTFYRGQ---LQQLMQALPSELNVEVLTVDACQGSEFDFVVLSTVRANA--QQRLGFVKDAQRINVAISRSRLQLFIVGHRYTLGGDKD--WKRVME 2054          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6921.17915.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY65_ECTSI2.990e-21691.25AAA_12 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JRT8_9PHAE4.930e-14163.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
E1ZLN5_CHLVA1.350e-2640.34Expressed protein n=1 Tax=Chlorella variabilis Tax... [more]
A0A7S4MYX4_GUITH3.160e-2138.37Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
A0A7S0GNV1_MICPS3.880e-1939.46Hypothetical protein (Fragment) n=2 Tax=Micromonas... [more]
R1E0W5_EMIHU9.740e-1837.72Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
R1DL56_EMIHU2.190e-1737.28Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A6A4YBF6_9STRA4.510e-1739.74Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A7S0L886_9EUKA6.940e-1733.81Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A813J659_POLGL1.370e-1635.67Hypothetical protein n=1 Tax=Polarella glacialis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041679DNA2/NAM7 helicase-like, AAA domainPFAMPF13087AAA_12coord: 174..325
e-value: 6.0E-34
score: 117.4
NoneNo IPR availableGENE3D3.40.50.300coord: 172..345
e-value: 1.1E-39
score: 137.9
NoneNo IPR availablePANTHERPTHR43788:SF8DNA POLYMERASE ALPHA-ASSOCIATED DNA HELICASE Acoord: 175..329
NoneNo IPR availablePANTHERPTHR43788FAMILY NOT NAMEDcoord: 175..329
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 173..331

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6921contigEcto-sp13_S_contig6921:130..3688 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6921.17915.1mRNA_Ecto-sp13_S_contig6921.17915.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6921 130..3688 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6921.17915.1 ID=prot_Ecto-sp13_S_contig6921.17915.1|Name=mRNA_Ecto-sp13_S_contig6921.17915.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=346bp
VFGNEARLGPHSKNFTMAGRMANDAELLFWRDARATWTKHLKVANAASWS
GLHLTNFPGIARLLALEQESLRSTGTGKKHDKLRRSGRAAGKSAFALERV
LKDNFYRRLENGSRGQRLMLRQLKALDKWVRLLSQGASRVASLLMRLEGL
TRFRIFTETRVLICTVDSTERMVVSSTFYDGKLKTAEELRLTRMSRQPCK
WVHVSGGEAKHQGRGYSNHLEIPKVMEEVRASMHRYGREADIRVITFYNM
QKRDLEREFKDQPDIKNVRIASVDSCQGSDADVVVISTVRSGGVGYRLSG
FITDRRRVNVAISRAKEECIIVGDKHTLRSSSGAMWRSVADHFTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041679DNA2/NAM7-like_AAA
IPR027417P-loop_NTPase