prot_Ecto-sp13_S_contig6920.17911.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6920.17911.1
Unique Nameprot_Ecto-sp13_S_contig6920.17911.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length87
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6920.17911.1 vs. uniprot
Match: D7FYV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV6_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 8.500e-40
Identity = 78/87 (89.66%), Postives = 83/87 (95.40%), Query Frame = 0 
Query:    1 RGPPGGAPAVAGGVGIRSTKASKMHNPVDAEELARIQAKKESYRRDLEAQMAEHTKLQDQRKQGMPGSKEAEVFYLQQAMEERNERN 87
            RGPPGGAPA  GGVG+RSTKAS MHNPVD EELARIQAKKESYRRDLEAQMAEHTKLQDQRKQG+PGSKEAEVF+LQ+AMEER+ERN
Sbjct:  551 RGPPGGAPAAGGGVGVRSTKASTMHNPVDPEELARIQAKKESYRRDLEAQMAEHTKLQDQRKQGVPGSKEAEVFHLQKAMEERSERN 637
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BLAST of mRNA_Ecto-sp13_S_contig6920.17911.1 vs. uniprot
Match: A0A6H5KLL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL2_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 2.010e-36
Identity = 76/87 (87.36%), Postives = 79/87 (90.80%), Query Frame = 0 
Query:    1 RGPPGGAPAVAGGVGIRSTKASKMHNPVDAEELARIQAKKESYRRDLEAQMAEHTKLQDQRKQGMPGSKEAEVFYLQQAMEERNERN 87
            R PP GAPAV GGVG+RSTKASKMHNPVD  ELA+IQAKKESYRRDLEAQMAE TKLQ+QRKQGM  SKEAEVFYLQQAMEERNERN
Sbjct:  554 RDPPSGAPAVGGGVGVRSTKASKMHNPVDPVELAKIQAKKESYRRDLEAQMAERTKLQNQRKQGMHRSKEAEVFYLQQAMEERNERN 640
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6920.17911.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYV6_ECTSI8.500e-4089.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLL2_9PHAE2.010e-3687.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 33..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6920contigEcto-sp13_S_contig6920:62..786 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6920.17911.1mRNA_Ecto-sp13_S_contig6920.17911.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6920 62..786 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6920.17911.1 ID=prot_Ecto-sp13_S_contig6920.17911.1|Name=mRNA_Ecto-sp13_S_contig6920.17911.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=87bp
RGPPGGAPAVAGGVGIRSTKASKMHNPVDAEELARIQAKKESYRRDLEAQ
MAEHTKLQDQRKQGMPGSKEAEVFYLQQAMEERNERN
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