mRNA_Ecto-sp13_S_contig6868.17831.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6868.17831.1 vs. uniprot
Match: D7G2R5_ECTSI (DUF2040 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R5_ECTSI) HSP 1 Score: 619 bits (1596), Expect = 3.650e-217 Identity = 389/430 (90.47%), Postives = 394/430 (91.63%), Query Frame = 3
Query: 93 MRKSGVKFGLIGTASSLKKGSSSAAGAAGRGRPIGSKPAPRRRPPGATSVFDANSDDEEEESKGDLSGVTAVNKRLAAISAKQEKQAKKEYEDALQADPSVFDYDRVYDGMKESRESKVAAATVAREKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREAQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGMGGFYSNLITKNIAMGGDVEKSANSAFTAGSKRHAATDEYEMQDGNEQAAATAKRKEAAXXXXXVASEGGPTNGASQGGREXXXXXXXGEADSSSGRTDESGGPTARMVDPRAGEQKKSRRDEAGVRDSER--RRRDDSGEAVDNVTKRARLAGEAAGGG--------GVEQRQDERTDEDKSAAEAADXXXXXXXXXXXXXXXXXXARERFLARKKAA 1352
MRKSGVKFGLIGTASSLKKGSSSAAGAAGRGRPIGSKPAPRRRP G+TSVFDANSDDEEE+SKGDLSGVTAVNKRLAAISAKQEKQAKKEYEDALQADPSVFDYDRVYDGMKESRESKVAAATVAREKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREAQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGMGGFYSNLITKNIAMGGDVEKSANSAFTAGSKRHAATDEYEMQDGNEQA XXXXX EGGP NGASQGGRE G+ADSS GRTDESGGPTARMVDPRAGEQKKSRRDEAGVRDSER RRR DSGEAVDNV KRARLAGEA+ GG GVEQRQDERTDE+KSAAEAADXXXXXXXXXXXXXXXXXXARERFLARKKAA
Sbjct: 1 MRKSGVKFGLIGTASSLKKGSSSAAGAAGRGRPIGSKPAPRRRPAGSTSVFDANSDDEEEDSKGDLSGVTAVNKRLAAISAKQEKQAKKEYEDALQADPSVFDYDRVYDGMKESRESKVAAATVAREKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREAQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGMGGFYSNLITKNIAMGGDVEKSANSAFTAGSKRHAATDEYEMQDGNEQAXXXXXXXXXXXXXXXX-XEGGPANGASQGGREGRDG---GDADSSPGRTDESGGPTARMVDPRAGEQKKSRRDEAGVRDSERSGRRRGDSGEAVDNVAKRARLAGEASDGGDASVGDDGGVEQRQDERTDEEKSAAEAADXXXXXXXXXXXXXXXXXXARERFLARKKAA 426
BLAST of mRNA_Ecto-sp13_S_contig6868.17831.1 vs. uniprot
Match: A0A835YZI8_9STRA (Coiled-coil domain-containing protein 55-domain containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZI8_9STRA) HSP 1 Score: 186 bits (473), Expect = 2.610e-51 Identity = 129/253 (50.99%), Postives = 164/253 (64.82%), Query Frame = 3
Query: 111 KFGLIGTASSLKKGSSSAAGAAGRGRPIGSKPAPRRRPPGATSVFDANSDDEEEESKGDLSGVTAVNKRLAAISAKQEKQAKKEYEDALQADPSVFDYDRVYDGMKESRESKVAAATVAR--EKEKR-QPKYIGNLLKQAKMRAVESDRIFDRKLQKEREAQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKT---GMGGFYSNLITKNIAMGGDVEKSANSAFTAGSKRHAATDEYEM 851
++GL+G A +LK S +A A + AP R P A + F +SD + D + AVN+RLAA A++ ++ +K A+ DPSVFDYD VYD + + R+ K AAA AR +K KR QP+YIGNLL+QAK+R VE DR++DRKL KERE DK G A MKFVTSAYK KLMEQKKWE+ Q+ E ERE + + GM FYSNL+TKNIAMGGDV A SAFTAGS+RHAA +++
Sbjct: 3 RYGLLGNAKTLKAQSVAAKTAKAP------RKAPARGP--AVAAFGDDSDSDGGAGAEDPTSRAAVNRRLAAEQAERARRMEKVAVQAVMDDPSVFDYDGVYDEVSKGRDDKAAAAAAARGNDKTKRLQPRYIGNLLEQAKLRTVEQDRVYDRKLAKEREEGDKEFGAAEMKFVTSAYKAKLMEQKKWEVAQEREAEREAQAEADMKRGGGMTAFYSNLLTKNIAMGGDVAN-ATSAFTAGSRRHAAAAAFKV 246
BLAST of mRNA_Ecto-sp13_S_contig6868.17831.1 vs. uniprot
Match: A0A7S1XVS8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVS8_9STRA) HSP 1 Score: 143 bits (360), Expect = 3.570e-35 Identity = 87/153 (56.86%), Postives = 114/153 (74.51%), Query Frame = 3
Query: 372 ALQADPSVFDYDRVYDGMKESRESKVAAATVAREKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREAQDKLEG--EATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGMGGFYSNLITKNIAMGGDVEKSANSAFTAGSKR 824
AL D SVFDYD VYD M +R+S AAA A E+++R+ KY NLLKQA+MR ++SDRI++RKL++E ++ G + KFV +AY+K+L E++ WE ++ E ERE RNDVTKTGM GFYSNL+TKNIAMGGDV K+A S+FT GSK+
Sbjct: 4 ALTEDASVFDYDGVYDSMTSARDS--AAAAQASERKERKSKYTENLLKQAQMRKLQSDRIYERKLRREAAEVAEMHGGVKDEDKFVGAAYRKQLEEREAWEKAEREEAEREARNDVTKTGMMGFYSNLLTKNIAMGGDV-KNAQSSFTVGSKQ 153
BLAST of mRNA_Ecto-sp13_S_contig6868.17831.1 vs. uniprot
Match: A0A7S3HBP6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBP6_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.020e-33 Identity = 88/196 (44.90%), Postives = 124/196 (63.27%), Query Frame = 3
Query: 237 SVFDANSDDEEEESKGDLSGVTAVNKRLAAISAKQEKQAKKEYEDALQADPSVFDYDRVYDGMKESRESKVAAATVAREKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREAQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGMGGFYSNLITKNIAMGGDVEKSANSAFTAGSKR 824
S+FD DD +E+S + V+ VN +LA +A E+ A A+P ++DYD YD K ++K + K+ + +Y+ NLL +KMR E +R+F++ L KER+ +D G+ KFVT+AYKKKL+E KKWE + +L DE EQR DV K+GM GFY+NL+TKN+AMGGDV+ A S +TAGS R
Sbjct: 31 SMFDR--DDSDEDSSAVSNDVSRVNAQLARRNAILEQTMSA----AASAEPDIYDYDGAYDSFKAKEQAKHQLSQPIATKDAPKARYVNNLLATSKMREKEKERVFEKNLLKERKVEDAEFGDKD-KFVTAAYKKKLLEDKKWEYEDRLADEVEQRTDVRKSGMEGFYANLLTKNVAMGGDVDAHAVSVYTAGSAR 219
BLAST of mRNA_Ecto-sp13_S_contig6868.17831.1 vs. uniprot
Match: W7TFP5_9STRA (DUF2040 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFP5_9STRA) HSP 1 Score: 138 bits (347), Expect = 3.990e-32 Identity = 101/264 (38.26%), Postives = 145/264 (54.92%), Query Frame = 3
Query: 180 RGRPIGSKPAPRRRPPGATSVFDANSDDEEEESKGDLSGVTAVNKRLAAISAKQEKQAKKEYEDALQADPSVFDYDRVYDGMKESRESKVAAATVAREKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREAQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTK---------TGMGGFYSNLITKNIAMGGDVEKSANSAFTAGSKRHAATDEYEMQDGNEQAAATAKRKEAAXXXXXVASEGGPTN 944
RGRP + APRR A S+ D +SDD +E G L+ + NK L A S K +K ++ A +DPS++DYD VYD + RE + A A ++EK+ +YI NL + A+++ E DR ++R+L KER+ +D L + + FVTSAYKKKLME +KWE +LE+ +GM F+SNL+TKNIAMG DV+ +A SA+T GSK+ + + AA T K+ V GG ++
Sbjct: 25 RGRPRPASAAPRRPAGSAFSLDDDDSDDNGQEEDG-LASKASFNKMLQAQSIKAQKSLEEAEAAARASDPSIYDYDAVYDEIHAKREERDNMAAEAAKEEKKTSRYITNLKRAAELKKQEQDRFYERRLAKERKEEDALYKDKDV-FVTSAYKKKLMETQKWETIDRLEEXXXXXXXXXXXXKGAPGGGSGMDAFFSNLLTKNIAMGADVKVAARSAYTVGSKQQESAFGTSLPSATSTAAETVDNKDVLDPSSRVVDHGGASH 286
BLAST of mRNA_Ecto-sp13_S_contig6868.17831.1 vs. uniprot
Match: A0A8K1FKC2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKC2_PYTOL) HSP 1 Score: 132 bits (333), Expect = 9.920e-31 Identity = 79/154 (51.30%), Postives = 105/154 (68.18%), Query Frame = 3
Query: 363 YEDALQADPSVFDYDRVYDGMKESRESKVAAATVAREKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREAQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTG---MGGFYSNLITKNIAMGGDVEKSANSAFTAG 815
+E AL DPSVFDYD VYD ++ SR+ KV+ RE EK Q KYIG L+++AK+R +E DR+ +R+L KEREA D G+ K ++++YK+KL E K+W+ + D +E DVTK G M GFYSNL+TKNIAMGGD S +SA+T G
Sbjct: 82 HEKALAEDPSVFDYDGVYDEIQSSRQDKVSRRKAQRETEKAQSKYIGTLMEKAKVREIELDRVRERRLLKEREADDAQYGDKE-KLISASYKRKLQEMKRWDEEDARLDAKEAAEDVTKRGNEAMVGFYSNLLTKNIAMGGDTSNS-HSAYTVG 233
BLAST of mRNA_Ecto-sp13_S_contig6868.17831.1 vs. uniprot
Match: A0A7S4E5L4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E5L4_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.100e-30 Identity = 81/181 (44.75%), Postives = 118/181 (65.19%), Query Frame = 3
Query: 306 VNKRLAAISAKQEKQAKKEYEDALQADPSVFDYDRVYDGMKESRESKVAAATVAREKEKRQP--KYIGNLLKQAKMRAVESDRIFDRKLQKEREAQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGMGGFYSNLITKNIAMGGDVEKSANSAFTAGSKRHAATDE 842
V +++ + A Q K+A + A DPS++DYD VYD MKE K++A + +P +YIG+L + AK+R E DR+++R+L KE+E QDK T +FVT+AYKK+L E +KW+ + + DE E+R +GM GFYSNL+T+NIA G DVEK+A S++T GS+R+A DE
Sbjct: 52 VAQQMRDLGAAQRKRAXXQAAQAAAVDPSIYDYDGVYDQMKEDERKKISARSGLSNTNHSKPGARYIGSLKQAAKVREREFDRVYERQLLKEQE-QDKDTYGDTERFVTAAYKKQLQESRKWDAEDRRMDEVEERTSAQTSGMAGFYSNLLTRNIAAGADVEKAAVSSYTHGSRRNAFVDE 231
BLAST of mRNA_Ecto-sp13_S_contig6868.17831.1 vs. uniprot
Match: A0A662Y6L8_9STRA (DUF2040 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y6L8_9STRA) HSP 1 Score: 130 bits (327), Expect = 4.500e-30 Identity = 88/183 (48.09%), Postives = 116/183 (63.39%), Query Frame = 3
Query: 279 KGDLSGVTAVNKRLAAISAK--QEKQAKKEYEDALQADPSVFDYDRVYDGMKESRESKVAAATVAREKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREAQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTG---MGGFYSNLITKNIAMGGDVEKSANSAFTA 812
K D A +R+ +A+ Q+ Q ++ AL DPSVFDYD VYD MK +R+S+V V RE EK+QPKYIG LL QAK+R VE++RI +R+L ER+A D L G+ K V+++YK+KL E K+W+ + E R+DVTK G M GFY+NL KNIAMGG A SA+TA
Sbjct: 30 KADEDAKAADRRRVGLEAARSLQQSQVERTRAQALADDPSVFDYDAVYDDMKSARQSEVTKRAVQREAEKKQPKYIGTLLAQAKIREVENERIRERRLLHERKADDALYGDKE-KLVSASYKRKLQEMKRWDEEDARLANLEDRDDVTKQGEHAMAGFYANL-NKNIAMGGSTAN-ARSAYTA 209
BLAST of mRNA_Ecto-sp13_S_contig6868.17831.1 vs. uniprot
Match: A0A2D4BZE0_PYTIN (DUF2040 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZE0_PYTIN) HSP 1 Score: 129 bits (325), Expect = 1.000e-29 Identity = 78/160 (48.75%), Postives = 108/160 (67.50%), Query Frame = 3
Query: 372 ALQADPSVFDYDRVYDGMKESRESKVAAATVAREKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREAQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTG---MGGFYSNLITKNIAMGGDVEKSANSAFTAGSKRHAATDE 842
AL+ DPSVFDYD VYD ++ SR+ K++ RE EK+Q KYI +L+++AK+R +E +RI +R+L KER +D L G+ K ++++YK+KLME K+W+ + D E DVTK G M GFYSNL+TKNIAMG D S+ SA+T G K+ T E
Sbjct: 50 ALEEDPSVFDYDGVYDEIQSSRQDKLSKRKAEREAEKKQSKYITSLVEKAKIREIEHERIRERRLLKERATEDALYGDKE-KLISASYKRKLMEMKRWDEEDARLDAVEAAEDVTKRGTEAMAGFYSNLLTKNIAMGSDAS-SSRSAYTVGGKKETDTRE 207
BLAST of mRNA_Ecto-sp13_S_contig6868.17831.1 vs. uniprot
Match: A0A1V9ZKX0_9STRA (DUF2040 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKX0_9STRA) HSP 1 Score: 127 bits (320), Expect = 2.830e-29 Identity = 82/158 (51.90%), Postives = 106/158 (67.09%), Query Frame = 3
Query: 351 AKKEYEDALQADPSVFDYDRVYDGMKESRESKVAAATVAREKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREAQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTG---MGGFYSNLITKNIAMGGDVEKSANSAFTAG 815
A++ ++AL +DP+VFDYD VYD M+ R + AA V Q KYI LL++AK+R +E DRI +R+L KERE DKL G+ T KF+TS+YK+KLME K+WE + E E DVTK G M GFY+NL+T NIAMGG +EK A SA+T G
Sbjct: 60 AERAVQEALASDPNVFDYDGVYDSMQAERVKQKAAKKVEGVP---QSKYINVLLEKAKIREIEHDRIRERRLLKEREEDDKLHGD-TEKFITSSYKRKLMEAKRWEEEDARLAEIEAAQDVTKRGELGMAGFYANLLTNNIAMGGTIEK-ATSAYTTG 212 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6868.17831.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6868.17831.1 >prot_Ecto-sp13_S_contig6868.17831.1 ID=prot_Ecto-sp13_S_contig6868.17831.1|Name=mRNA_Ecto-sp13_S_contig6868.17831.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=421bp MRKSGVKFGLIGTASSLKKGSSSAAGAAGRGRPIGSKPAPRRRPPGATSVback to top mRNA from alignment at Ecto-sp13_S_contig6868:2703..6095+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6868.17831.1 ID=mRNA_Ecto-sp13_S_contig6868.17831.1|Name=mRNA_Ecto-sp13_S_contig6868.17831.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3393bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6868:2703..6095+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6868:2703..6095+ >mRNA_Ecto-sp13_S_contig6868.17831.1 ID=mRNA_Ecto-sp13_S_contig6868.17831.1|Name=mRNA_Ecto-sp13_S_contig6868.17831.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1263bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6868:2703..6095+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |