prot_Ecto-sp13_S_contig6858.17820.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6858.17820.1
Unique Nameprot_Ecto-sp13_S_contig6858.17820.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length344
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6858.17820.1 vs. uniprot
Match: D8LIB9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB9_ECTSI)

HSP 1 Score: 471 bits (1213), Expect = 6.700e-164
Identity = 287/342 (83.92%), Postives = 296/342 (86.55%), Query Frame = 0 
Query:    1 MRLRQPGNLKLLAREALSNISRFMESRQTSPHMVTVYASIRVLTRVLPALLSAPELRSWCWARRTLPQLLSYLENNEEQSPRRNGQDVRQQXXXXXXXXXQDQTPRGRFPTPEPDDDEATPLPDTTSPPSPAELDDGVASSGTRVSTGXXXXXXXX------VNCRPYGGSGEGDDDWEGDGGKGGDSXXXXXXXXXXXXXXAGDDFPMCFASVALHAATSLLSLPGFCVDDEAMEWDDYYTPIPELHYGIKEAAIIWAPGVAVTEHNMRQVSSFDSNRVETLRLLATLLSLPLFLNTPSPFSSELFYSLLNLAVVSRAVPGGEAAGRAGGGGGQGVMRWFG 336
            MRLRQPGNLKLLAREALSNISRFMESRQTSPHMVTV ASIRVLTRVLPALLS+PELRSWCWARRTLPQLLSYL NNEE SP RNGQDVRQQ       X  +QTPRGRFPTPEP D E     DTTSPPSP ELDDGVASSG      XXXXXXXX      VNCRPYGGSG+GDD            XXXXXXXXXXXXXXAGDDFP+CFASVALHAATSLLS PGFCVDDEAMEW+DYYTPIP+LHYGIKEAAIIWAPGVAVTEHNMRQVSSFDSNRVETLRLLATLLSLPLFL+TPSPFSSELFYSLLNLAVV++AVPGGEAAGRAGGGGGQGVMRWFG
Sbjct:   37 MRLRQPGNLKLLAREALSNISRFMESRQTSPHMVTVNASIRVLTRVLPALLSSPELRSWCWARRTLPQLLSYLRNNEEHSPPRNGQDVRQQQQQQGRRX--EQTPRGRFPTPEPIDAEXXXXXDTTSPPSPTELDDGVASSGXXXXXXXXXXXXXXXXXRGGVNCRPYGGSGDGDDXXXXXXXXX-XXXXXXXXXXXXXXXXAGDDFPVCFASVALHAATSLLSFPGFCVDDEAMEWNDYYTPIPDLHYGIKEAAIIWAPGVAVTEHNMRQVSSFDSNRVETLRLLATLLSLPLFLDTPSPFSSELFYSLLNLAVVNKAVPGGEAAGRAGGGGGQGVMRWFG 375
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6858.17820.1 vs. uniprot
Match: A0A6H5KZY8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZY8_9PHAE)

HSP 1 Score: 473 bits (1216), Expect = 1.520e-153
Identity = 302/390 (77.44%), Postives = 309/390 (79.23%), Query Frame = 0 
Query:    1 MRLRQPGNLKLLAREALSNISRFMESRQTSPHMVTVYASIRVLTRVLPALLSAPELRSWCWARRTLPQLLSYLENNEEQSPRRNGQDVRQQXXXXXXXXX-QDQTPRGRFPTPEPDDDEATPLPDTTSPPSPAELDDGVASSGTRVSTGXXXXXXXXVNCRPYGGSGEGDDDWEGDGGKGGDSXXXXXXXXXXXXXXAGDDFPMCFASVALHAATSLLSLPGFCVDDEAMEWDDYYTPIPELHYGIKEAAIIWAPGVAVTEHNMRQVSSFDSNRVETLRLLATLLSLPLFLNTPSP---------------------------------------------FSSELFYSLLNLAVVSRAVPGGEAAGRAGGGGGQGVMRWFGLGGGGTGG 344
            MRLRQPGNLKLLAREALSNI RF+ESRQTSPHMVTVYASIRVLTRVLPALLS PELRSWCWARRTLPQLLS+LENNEEQSPRRNGQDVRQ XXXXXXX   Q+QTPRGRFPTP             TSPPSPAELDDGVASSG+ VSTGXXXXXXX VNCRPYGGSGE DDD EGDGGKG   XXXXXXXXXXX   AGD+FP+CFASVALHA TSLLS PGFCVDDEAMEWDDYYTPIPELHYGIKEAAIIWAPGVAVTEHNMRQVSSFDSNRVETLRLLATLLSLPLFL+TPSP                                             FSSELFYSLLNLAVVSRA PGG AAGRA GGGGQGVMRWF LGGG TGG
Sbjct:   99 MRLRQPGNLKLLAREALSNICRFVESRQTSPHMVTVYASIRVLTRVLPALLSTPELRSWCWARRTLPQLLSFLENNEEQSPRRNGQDVRQXXXXXXXXGRRQEQTPRGRFPTPXXXXXXXXXXXXMTSPPSPAELDDGVASSGSGVSTGXXXXXXXSVNCRPYGGSGE-DDDGEGDGGKG-XXXXXXXXXXXXXRGGAGDEFPVCFASVALHAVTSLLSFPGFCVDDEAMEWDDYYTPIPELHYGIKEAAIIWAPGVAVTEHNMRQVSSFDSNRVETLRLLATLLSLPLFLDTPSPRTPTIPPQAPPLRRRRWPSRAPPPSIPGKPLPNPTAALAASRHLQFSSELFYSLLNLAVVSRAAPGGRAAGRASGGGGQGVMRWFALGGGRTGG 486
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6858.17820.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIB9_ECTSI6.700e-16483.92Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KZY8_9PHAE1.520e-15377.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026705Hid-1/Ecm30PFAMPF12722Hid1coord: 209..292
e-value: 2.2E-7
score: 29.5
IPR026705Hid-1/Ecm30PANTHERPTHR21575FAMILY NOT NAMEDcoord: 4..304

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6858contigEcto-sp13_S_contig6858:2479..7801 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6858.17820.1mRNA_Ecto-sp13_S_contig6858.17820.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6858 2449..7801 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6858.17820.1 ID=prot_Ecto-sp13_S_contig6858.17820.1|Name=mRNA_Ecto-sp13_S_contig6858.17820.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=344bp
MRLRQPGNLKLLAREALSNISRFMESRQTSPHMVTVYASIRVLTRVLPAL
LSAPELRSWCWARRTLPQLLSYLENNEEQSPRRNGQDVRQQQRQQQQGRR
QDQTPRGRFPTPEPDDDEATPLPDTTSPPSPAELDDGVASSGTRVSTGGG
GAGGGGVNCRPYGGSGEGDDDWEGDGGKGGDSGSEGGGGGKDGRGGAGDD
FPMCFASVALHAATSLLSLPGFCVDDEAMEWDDYYTPIPELHYGIKEAAI
IWAPGVAVTEHNMRQVSSFDSNRVETLRLLATLLSLPLFLNTPSPFSSEL
FYSLLNLAVVSRAVPGGEAAGRAGGGGGQGVMRWFGLGGGGTGG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026705Hid-1/Ecm30