mRNA_Ecto-sp13_S_contig6856.17818.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6856.17818.1
Unique NamemRNA_Ecto-sp13_S_contig6856.17818.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6856.17818.1 vs. uniprot
Match: D8LHV0_ECTSI (Diacylglycerol kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV0_ECTSI)

HSP 1 Score: 487 bits (1254), Expect = 1.160e-167
Identity = 242/243 (99.59%), Postives = 243/243 (100.00%), Query Frame = 1 
Query:    1 SICEENIPDDSCPLLVFVNSKSGGKQGGVLISRFRALLNPLQVIDLSQEDPLEVLQRFRNVANLRLLACGGDGTVAWLLQSVDAISWKVKRPPLAILPLGTGNDLARVLGWGGGYTGEDVENLLDTIENAQVTMLDRWSVSVVTTSKGFRKGQKDRQLIMNNYLGIGVDGQVALDFHKMREARPVLFFNRLFNKALYAQLGVRSALVRACHDLPSRIELRCDGQLVDLPATTASIIACNINSY 729
            SICEENIPDDSCPLLVFVNSKSGGKQGGVLISRFRALLNPLQVIDLSQEDPLEVLQRFRNVANLRLLACGGDGTVAWLLQSVDAI+WKVKRPPLAILPLGTGNDLARVLGWGGGYTGEDVENLLDTIENAQVTMLDRWSVSVVTTSKGFRKGQKDRQLIMNNYLGIGVDGQVALDFHKMREARPVLFFNRLFNKALYAQLGVRSALVRACHDLPSRIELRCDGQLVDLPATTASIIACNINSY
Sbjct:  137 SICEENIPDDSCPLLVFVNSKSGGKQGGVLISRFRALLNPLQVIDLSQEDPLEVLQRFRNVANLRLLACGGDGTVAWLLQSVDAITWKVKRPPLAILPLGTGNDLARVLGWGGGYTGEDVENLLDTIENAQVTMLDRWSVSVVTTSKGFRKGQKDRQLIMNNYLGIGVDGQVALDFHKMREARPVLFFNRLFNKALYAQLGVRSALVRACHDLPSRIELRCDGQLVDLPATTASIIACNINSY 379
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BLAST of mRNA_Ecto-sp13_S_contig6856.17818.1 vs. uniprot
Match: A0A6H5LB27_9PHAE (Diacylglycerol kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB27_9PHAE)

HSP 1 Score: 488 bits (1257), Expect = 3.460e-160
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 1 
Query:    1 SICEENIPDDSCPLLVFVNSKSGGKQGGVLISRFRALLNPLQVIDLSQEDPLEVLQRFRNVANLRLLACGGDGTVAWLLQSVDAISWKVKRPPLAILPLGTGNDLARVLGWGGGYTGEDVENLLDTIENAQVTMLDRWSVSVVTTSKGFRKGQKDRQLIMNNYLGIGVDGQVALDFHKMREARPVLFFNRLFNKALYAQLGVRSALVRACHDLPSRIELRCDGQLVDLPATTASIIACNINSY 729
            SICEENIPDDSCPLLVFVNSKSGGKQGGVLISRFRALLNPLQVIDLSQEDPLEVLQRFRNVANLRLLACGGDGTVAWLLQSVDAISWKVKRPPLAILPLGTGNDLARVLGWGGGYTGEDVENLLDTIENAQVTMLDRWSVSVVTTSKGFRKGQKDRQLIMNNYLGIGVDGQVALDFHKMREARPVLFFNRLFNKALYAQLGVRSALVRACHDLPSRIELRCDGQLVDLPATTASIIACNINSY
Sbjct:  875 SICEENIPDDSCPLLVFVNSKSGGKQGGVLISRFRALLNPLQVIDLSQEDPLEVLQRFRNVANLRLLACGGDGTVAWLLQSVDAISWKVKRPPLAILPLGTGNDLARVLGWGGGYTGEDVENLLDTIENAQVTMLDRWSVSVVTTSKGFRKGQKDRQLIMNNYLGIGVDGQVALDFHKMREARPVLFFNRLFNKALYAQLGVRSALVRACHDLPSRIELRCDGQLVDLPATTASIIACNINSY 1117
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BLAST of mRNA_Ecto-sp13_S_contig6856.17818.1 vs. uniprot
Match: K3WM12_GLOUD (Diacylglycerol kinase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WM12_GLOUD)

HSP 1 Score: 250 bits (638), Expect = 8.600e-75
Identity = 123/236 (52.12%), Postives = 166/236 (70.34%), Query Frame = 1 
Query:   22 PDDSCPLLVFVNSKSGGKQGGVLISRFRALLNPLQVIDLSQEDPLEVLQRFRNVANLRLLACGGDGTVAWLLQSVDAISWKVKRPPLAILPLGTGNDLARVLGWGGGYTGEDVENLLDTIENAQVTMLDRWSVSVVTTSKGFRKGQKDRQLIMNNYLGIGVDGQVALDFHKMREARPVLFFNRLFNKALYAQLGVRSALVRACHDLPSRIELRCDGQLVDLPATTASIIACNINSY 729
            P DS PLLVF+NS+SGG+ G  ++ + R  LNPLQV DLS + P+E L +F+++  LR+L CGGDGTV W+L ++D I    ++PP+AILPLGTGNDLARVLGWG G++  DV ++L  I  A V++LDRW V++         G+K  + ++NNYLG+GVD QVAL+FH+ RE  P LF ++  NK  Y+Q G ++ LVR C  LPS+IEL CDG++V LP  T  +I  NINSY
Sbjct:  330 PKDSSPLLVFINSRSGGQMGLYVLRQIRKWLNPLQVYDLSHQTPIEPLLQFKDIPRLRILVCGGDGTVGWVLSALDEIGGP-RQPPIAILPLGTGNDLARVLGWGSGFSTRDVSDILTEIAAAHVSLLDRWQVNI--------DGKK--RAVLNNYLGVGVDAQVALEFHEQRERSPGLFMSQFVNKLWYSQFGAKNFLVRTCAGLPSKIELECDGKVVSLPPGTEGVILLNINSY 554
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BLAST of mRNA_Ecto-sp13_S_contig6856.17818.1 vs. uniprot
Match: A0A5D6Y0E8_9STRA (Diacylglycerol kinase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0E8_9STRA)

HSP 1 Score: 246 bits (629), Expect = 2.200e-73
Identity = 119/236 (50.42%), Postives = 163/236 (69.07%), Query Frame = 1 
Query:   22 PDDSCPLLVFVNSKSGGKQGGVLISRFRALLNPLQVIDLSQEDPLEVLQRFRNVANLRLLACGGDGTVAWLLQSVDAISWKVKRPPLAILPLGTGNDLARVLGWGGGYTGEDVENLLDTIENAQVTMLDRWSVSVVTTSKGFRKGQKDRQLIMNNYLGIGVDGQVALDFHKMREARPVLFFNRLFNKALYAQLGVRSALVRACHDLPSRIELRCDGQLVDLPATTASIIACNINSY 729
            P D+ PLLVF+NS+SGG+ G  ++ + R  LNP+QV DLS E P+  L +F++   LR+L CGGDGTV W+L ++DA+    ++PP+AILPLGTGNDLARVLGWG G++  DV  +L  +  A V++LDRW V++         G+K  + ++NNYLG+GVD QVAL+FH+ RE  P LF ++  NK  Y+Q G ++ LVR C  LP +IEL CDG++V LP  T  +I  NINSY
Sbjct:  329 PPDTTPLLVFINSRSGGQMGLYVLRQIRKWLNPIQVYDLSHESPMAPLLQFKDTPRLRILVCGGDGTVGWVLSALDALG-SARQPPIAILPLGTGNDLARVLGWGSGFSTRDVSEILSEVAAAHVSLLDRWQVTI--------DGKK--RAVLNNYLGVGVDAQVALEFHEQRERSPGLFMSQFVNKLWYSQFGAKNFLVRTCAGLPDKIELECDGKVVSLPPGTEGVILLNINSY 553
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BLAST of mRNA_Ecto-sp13_S_contig6856.17818.1 vs. uniprot
Match: A0A836CH11_9STRA (Diacylglycerol kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH11_9STRA)

HSP 1 Score: 246 bits (628), Expect = 1.520e-72
Identity = 123/240 (51.25%), Postives = 161/240 (67.08%), Query Frame = 1 
Query:   19 IPDDSCPLLVFVNSKSGG--KQGGVLISRFRALLNPLQVIDLSQEDPLEVLQRFRNVANLRLLACGGDGTVAWLLQSVDAISWKVKRPPLAILPLGTGNDLARVLGWGGGYTG-EDVENLLDTIENAQVTMLDRWSVSVVTTSKGFRKGQKDRQLIMNNYLGIGVDGQVALDFHKMREARPVLFFNRLFNKALYAQLGVRSALVRACHDLPSRIELRCDGQLVDLPATTASIIACNINSY 729
            I   + PL V VN++SG   +QG  L++  R  LNPLQV DL  EDP + L+RF  V +LR+L CGGDGTV W+L ++DA++W    PPLA+LP+GTGNDLAR LGWG GY G ED+  LL+T+  +    LDRWSV +       R G   + + M NY+GIGVDGQVAL+FH MREA   LFF+R+ NK +YA  G+R+ L  +C +L S +E+  DG+ V+LP  T S+I  NINSY
Sbjct:  398 IARGAAPLAVLVNTRSGAGARQGRELLAALRGALNPLQVADLGAEDPADFLRRFARVRDLRVLCCGGDGTVGWVLHAIDAVAWDRGPPPLAVLPMGTGNDLARTLGWGPGYDGTEDLNQLLETVGASHKVKLDRWSVEIEPLKAKRRGGGDSKSVPMGNYMGIGVDGQVALEFHNMREAHSGLFFSRVVNKVVYAGSGLRNILFPSCQELASHVEIYVDGERVELPPDTESVIILNINSY 637
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BLAST of mRNA_Ecto-sp13_S_contig6856.17818.1 vs. uniprot
Match: G4ZDJ2_PHYSP (Diacylglycerol kinase n=6 Tax=Phytophthora TaxID=4783 RepID=G4ZDJ2_PHYSP)

HSP 1 Score: 242 bits (617), Expect = 9.420e-72
Identity = 117/237 (49.37%), Postives = 163/237 (68.78%), Query Frame = 1 
Query:   22 PDDSCPLLVFVNSKSGGKQGGVLISRFRALLNPLQVIDLSQEDPLEVLQRFRNVANLRLLACGGDGTVAWLLQSVDAISWKVKRPPLAILPLGTGNDLARVLGWGGGYTGE-DVENLLDTIENAQVTMLDRWSVSVVTTSKGFRKGQKDRQLIMNNYLGIGVDGQVALDFHKMREARPVLFFNRLFNKALYAQLGVRSALVRACHDLPSRIELRCDGQLVDLPATTASIIACNINSY 729
            P ++ PLLVF+NS+SGGK G  ++ + R  LNPLQV DLS + P+E L+RF  +  LR+L CGGDGTV W+L ++D I   +++PP+A+LPLGTGNDLARVLGWG G++   DV  +L  +E A V++LDRW V++         G   ++ ++NNYLG+GVD QVAL+FH+ RE  P LF ++  NK  Y+Q G ++ +VR C  LP +I+L CDG+ + LP  T  +I  NINSY
Sbjct:  327 PKETTPLLVFINSRSGGKMGLHVLRQVRKWLNPLQVYDLSHQSPIEPLRRFIGLPRLRILVCGGDGTVGWVLGALDEIG-AMRQPPIAVLPLGTGNDLARVLGWGAGFSAPTDVSEILSEVEAAHVSLLDRWQVNI---------GDSQKRAVLNNYLGVGVDAQVALEFHEQRERSPGLFMSQFVNKLWYSQFGAKNFIVRTCAGLPEKIDLVCDGKRIALPEGTEGVILLNINSY 553
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BLAST of mRNA_Ecto-sp13_S_contig6856.17818.1 vs. uniprot
Match: A0A3M6VCK2_9STRA (Diacylglycerol kinase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCK2_9STRA)

HSP 1 Score: 239 bits (609), Expect = 2.100e-71
Identity = 117/237 (49.37%), Postives = 160/237 (67.51%), Query Frame = 1 
Query:   22 PDDSCPLLVFVNSKSGGKQGGVLISRFRALLNPLQVIDLSQEDPLEVLQRFRNVANLRLLACGGDGTVAWLLQSVDAISWKVKRPPLAILPLGTGNDLARVLGWGGGYTGE-DVENLLDTIENAQVTMLDRWSVSVVTTSKGFRKGQKDRQLIMNNYLGIGVDGQVALDFHKMREARPVLFFNRLFNKALYAQLGVRSALVRACHDLPSRIELRCDGQLVDLPATTASIIACNINSY 729
            P+ + PLLVF+NS+SGGK G  ++   R  LNP+QV DLS + P+E L+RF  +  LR+L CGGDGTV W+L ++D I    ++PP+A+LPLGTGNDLARVLGWG  ++   DV  LL  +E A V++LDRW V++         G+  +++++NNY+G+GVD QVAL+FH+ RE  P LF N+  NK  Y+Q G ++ LVR C  LP +I L CDG+L+  P     II  NINSY
Sbjct:  231 PEQTTPLLVFINSRSGGKMGLHVLRHIRKWLNPVQVYDLSHQSPIEPLRRFIGLPRLRILVCGGDGTVGWVLGALDEIR-APRQPPIAVLPLGTGNDLARVLGWGASFSAPTDVSELLSEVEAAHVSLLDRWEVNI---------GKSQKRVVLNNYMGVGVDAQVALEFHEQRERSPRLFMNQFVNKLWYSQFGAKNFLVRTCAGLPDKIVLVCDGKLITFPEGIEGIIILNINSY 457
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BLAST of mRNA_Ecto-sp13_S_contig6856.17818.1 vs. uniprot
Match: A0A662WPS3_9STRA (Diacylglycerol kinase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WPS3_9STRA)

HSP 1 Score: 241 bits (615), Expect = 3.070e-71
Identity = 118/237 (49.79%), Postives = 163/237 (68.78%), Query Frame = 1 
Query:   22 PDDSCPLLVFVNSKSGGKQGGVLISRFRALLNPLQVIDLSQEDPLEVLQRFRNVANLRLLACGGDGTVAWLLQSVDAISWKVKRPPLAILPLGTGNDLARVLGWGGGYTGE-DVENLLDTIENAQVTMLDRWSVSVVTTSKGFRKGQKDRQLIMNNYLGIGVDGQVALDFHKMREARPVLFFNRLFNKALYAQLGVRSALVRACHDLPSRIELRCDGQLVDLPATTASIIACNINSY 729
            P ++ PLLVF+NS+SGGK G  ++ + R  LNP+QV DLS + P+E L++F  +  LR+L CGGDGTV W+L ++D I    ++PP+AILPLGTGNDLARVLGWG G++   DV  LL  +E A V++LDRW V++         G   +++++NNYLG+GVD QVAL+FH+ RE  P LF ++  NK  Y+Q G ++ LVR C  LP ++EL CDG+ + LP  T  +I  NINSY
Sbjct:  351 PKETTPLLVFINSRSGGKLGLDVLRQVRMWLNPVQVYDLSHQSPVEPLRQFLGLPRLRILVCGGDGTVGWVLGALDEIG-AARQPPIAILPLGTGNDLARVLGWGAGFSAPTDVSELLSEVEAAHVSLLDRWQVNI---------GDSQKRVVLNNYLGVGVDAQVALEFHEQRERSPELFMSQFVNKLWYSQFGAKNFLVRTCAGLPDKMELVCDGKRIALPEGTEGVILLNINSY 577
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BLAST of mRNA_Ecto-sp13_S_contig6856.17818.1 vs. uniprot
Match: A0A225WSQ2_9STRA (Diacylglycerol kinase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WSQ2_9STRA)

HSP 1 Score: 239 bits (609), Expect = 5.140e-71
Identity = 117/237 (49.37%), Postives = 162/237 (68.35%), Query Frame = 1 
Query:   22 PDDSCPLLVFVNSKSGGKQGGVLISRFRALLNPLQVIDLSQEDPLEVLQRFRNVANLRLLACGGDGTVAWLLQSVDAISWKVKRPPLAILPLGTGNDLARVLGWGGGYTGE-DVENLLDTIENAQVTMLDRWSVSVVTTSKGFRKGQKDRQLIMNNYLGIGVDGQVALDFHKMREARPVLFFNRLFNKALYAQLGVRSALVRACHDLPSRIELRCDGQLVDLPATTASIIACNINSY 729
            P ++ PLLVF+NS+SGGK G  ++ + R  LNP+QV DLS + P+E L+RF  +  LR+L CGGDGTV W+L ++D I    ++PP+A+LPLGTGNDLARVLGWG G++   DV  +L  +E A V++LDRW V++         G   +++++NNYLG+GVD QVAL+FH+ RE  P LF ++  NK  Y+Q G ++ LVR C  LP +I L CDG+ + LP  T  +I  NINSY
Sbjct:  317 PKETTPLLVFINSRSGGKLGLHVLRQVRMWLNPVQVYDLSHQSPIEPLRRFIGLPRLRILVCGGDGTVGWVLGALDEIGAS-RQPPIAVLPLGTGNDLARVLGWGAGFSAPTDVSEILSEVEAAHVSLLDRWEVNI---------GDPQKRVVLNNYLGVGVDAQVALEFHEQRERSPGLFMSQFVNKLWYSQFGAKNFLVRTCAGLPEKIVLVCDGKRITLPEGTEGVILLNINSY 543
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BLAST of mRNA_Ecto-sp13_S_contig6856.17818.1 vs. uniprot
Match: A0A2P4X073_9STRA (Diacylglycerol kinase n=5 Tax=Phytophthora TaxID=4783 RepID=A0A2P4X073_9STRA)

HSP 1 Score: 239 bits (609), Expect = 1.200e-70
Identity = 117/237 (49.37%), Postives = 161/237 (67.93%), Query Frame = 1 
Query:   22 PDDSCPLLVFVNSKSGGKQGGVLISRFRALLNPLQVIDLSQEDPLEVLQRFRNVANLRLLACGGDGTVAWLLQSVDAISWKVKRPPLAILPLGTGNDLARVLGWGGGYTGE-DVENLLDTIENAQVTMLDRWSVSVVTTSKGFRKGQKDRQLIMNNYLGIGVDGQVALDFHKMREARPVLFFNRLFNKALYAQLGVRSALVRACHDLPSRIELRCDGQLVDLPATTASIIACNINSY 729
            P ++ PLLVF+NS+SGGK G  ++ + R  LNP+QV DLS   P+E L+RF  +  LR+L CGGDGTV W+L ++D I    ++PP+A+LPLGTGNDLARVLGWG G++   DV  +L  +E A V++LDRW V++         G   +++++NNYLG+GVD QVAL+FH+ RE  P LF ++  NK  Y+Q G ++ LVR C  LP +I L CDG+ + LP  T  +I  NINSY
Sbjct:  314 PKETTPLLVFINSRSGGKMGLHVLRQVRMWLNPVQVYDLSHHSPIEPLRRFIGLPRLRILVCGGDGTVGWVLGALDEIG-APRQPPIAVLPLGTGNDLARVLGWGAGFSAPTDVSEILTEVEAAHVSLLDRWEVNI---------GDSQKRVVLNNYLGVGVDAQVALEFHEQRERSPGLFMSQFVNKLWYSQFGAKNFLVRTCAGLPEKIVLVCDGKRITLPEGTEGVILLNINSY 540
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6856.17818.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHV0_ECTSI1.160e-16799.59Diacylglycerol kinase n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5LB27_9PHAE3.460e-160100.00Diacylglycerol kinase n=1 Tax=Ectocarpus sp. CCAP ... [more]
K3WM12_GLOUD8.600e-7552.12Diacylglycerol kinase n=1 Tax=Globisporangium ulti... [more]
A0A5D6Y0E8_9STRA2.200e-7350.42Diacylglycerol kinase n=1 Tax=Pythium brassicum Ta... [more]
A0A836CH11_9STRA1.520e-7251.25Diacylglycerol kinase n=1 Tax=Tribonema minus TaxI... [more]
G4ZDJ2_PHYSP9.420e-7249.37Diacylglycerol kinase n=6 Tax=Phytophthora TaxID=4... [more]
A0A3M6VCK2_9STRA2.100e-7149.37Diacylglycerol kinase n=1 Tax=Peronospora effusa T... [more]
A0A662WPS3_9STRA3.070e-7149.79Diacylglycerol kinase n=2 Tax=Nothophytophthora sp... [more]
A0A225WSQ2_9STRA5.140e-7149.37Diacylglycerol kinase n=1 Tax=Phytophthora megakar... [more]
A0A2P4X073_9STRA1.200e-7049.37Diacylglycerol kinase n=5 Tax=Phytophthora TaxID=4... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6856contigEcto-sp13_S_contig6856:823..5146 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score491.9
Seed ortholog evalue1.7e-136
Seed eggNOG ortholog2880.D8LHV0
Model size731
KEGG rclassRC00002,RC00017
KEGG koko:K00901
KEGG ReactionR02240
KEGG Pathwayko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00561,map00564,map01100,map01110,map04070,map04072,map05231
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004143,GO:0005488,GO:0005509,GO:0006793,GO:0006796,GO:0006950,GO:0007275,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009611,GO:0009628,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0022622,GO:0032501,GO:0032502,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0048364,GO:0048366,GO:0048367,GO:0048731,GO:0048827,GO:0048856,GO:0050896,GO:0099402
Exons7
EggNOG free text desc.protein kinase C-activating G-protein coupled receptor signaling pathway
EggNOG OGsKOG1169@1,KOG1169@2759
EC2.7.1.107
Cds size729
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6856.17818.1prot_Ecto-sp13_S_contig6856.17818.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6856 823..5146 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463941.7223954-CDS-Ecto-sp13_S_contig6856:822..8631681463941.7223954-CDS-Ecto-sp13_S_contig6856:822..863Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6856 823..863 -
1681463941.8159554-CDS-Ecto-sp13_S_contig6856:1133..12391681463941.8159554-CDS-Ecto-sp13_S_contig6856:1133..1239Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6856 1134..1239 -
1681463941.8284657-CDS-Ecto-sp13_S_contig6856:1844..18921681463941.8284657-CDS-Ecto-sp13_S_contig6856:1844..1892Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6856 1845..1892 -
1681463941.8468125-CDS-Ecto-sp13_S_contig6856:2277..24181681463941.8468125-CDS-Ecto-sp13_S_contig6856:2277..2418Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6856 2278..2418 -
1681463941.8583837-CDS-Ecto-sp13_S_contig6856:3605..37581681463941.8583837-CDS-Ecto-sp13_S_contig6856:3605..3758Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6856 3606..3758 -
1681463941.8785431-CDS-Ecto-sp13_S_contig6856:4390..45041681463941.8785431-CDS-Ecto-sp13_S_contig6856:4390..4504Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6856 4391..4504 -
1681463941.9676552-CDS-Ecto-sp13_S_contig6856:5020..51461681463941.9676552-CDS-Ecto-sp13_S_contig6856:5020..5146Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6856 5021..5146 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6856.17818.1

>prot_Ecto-sp13_S_contig6856.17818.1 ID=prot_Ecto-sp13_S_contig6856.17818.1|Name=mRNA_Ecto-sp13_S_contig6856.17818.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=243bp
SICEENIPDDSCPLLVFVNSKSGGKQGGVLISRFRALLNPLQVIDLSQED
PLEVLQRFRNVANLRLLACGGDGTVAWLLQSVDAISWKVKRPPLAILPLG
TGNDLARVLGWGGGYTGEDVENLLDTIENAQVTMLDRWSVSVVTTSKGFR
KGQKDRQLIMNNYLGIGVDGQVALDFHKMREARPVLFFNRLFNKALYAQL
GVRSALVRACHDLPSRIELRCDGQLVDLPATTASIIACNINSY
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mRNA from alignment at Ecto-sp13_S_contig6856:823..5146-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6856.17818.1 ID=mRNA_Ecto-sp13_S_contig6856.17818.1|Name=mRNA_Ecto-sp13_S_contig6856.17818.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4324bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6856:823..5146- (Ectocarpus species13 EcNAP12_S_4_19m)
TCAATCTGCGAGGAGAACATTCCGGACGACAGCTGCCCCCTCTTGGTGTT
CGTCAACTCCAAGTCGGGGGGCAAACAGGGCGGTGTGCTCATCAGCCGCT
TCCGGGCGCTTCTCAACCCTCTACAGGTGTGTGTATGCGTGTTTAATGCG
TAGTGTTTGCAGCCTGTTGTTTTTTGTGTTTGGGACACCAACCCGAACCC
TGTTCTTTATTGCCCTAAGGCCCTGTTTGTCTTTTTTTTTGCATTGACCG
CGCTAACTGGCCGACCGATGACACAGCAGTGCATCCGTCTACACCGGGAA
ATGAGAACACGAACACGCTTTCTTGTCAGCTCTCCCCCCAAAAGGGGAGG
GGGGGGGGCCCAAAAGGGGGGGGGGGGGGGCGGAAGATGTGAGTGCACTG
TGTGTGCATGTGTGGATGGCTTTCCGTTATAAGCATCGACGGCGCTAACC
TGTTGTCTAATGACAATACTGCCGTAGGTTGCATGATAAAAAAAAGGGTG
ACAACATCTGGTCCGCGGCGCCCCCCCCATCAGGGCCGCCGGGGATAAAA
ATGCGATCTTGTTGCTTCGTAGATGGGATCCAACCTGTGCTTTTTCAAGG
GATCAATGTATGCATACGGCACAATTGCATCATCACACGTAGGTGATCGA
CTTGAGCCAGGAGGACCCTCTAGAGGTGTTGCAACGCTTCCGGAACGTGG
CTAACCTGAGGCTTCTCGCCTGCGGGGGCGACGGGACTGTGGCCTGGCTT
CTGCAGGTATGGGGCCAGATCCCGCCACACGTAATAATTTCCTCGCAAGT
CTAGGGACTGCGTGTTTTGCAGCTAGCGGACGATACCGGTAGTAATTATT
GCCTTGTTGGCCAACGAGTCTCCAGGACTGGATGTGTCGCTATTCTCTGG
GGTGCCACTCCCGATCTGTTTTTTCTGTTTTTGTTGGCCGAGTCTGCTAC
TACCAGCACAGACGGAACGTGGCAGGAATGCCTGTCCTTCACCTTTGGCA
TCGTTGCAAGAACAGTTGCCGTGTTTTGCGTTGGGCCTCGTGTTGATGGC
ACTGCTACTGCTGTGTGTGTACGTGTGCACGTTAGGCCGTACACGTCAAC
ACGTCAATCGCCTTGTTCTATTTTCTCTGCTGGTGCAACACCTGTGTACC
CTCGTTGTGCTTCTTCGGTGTAGCCATCGCCTGGCGAGAGGGCCTCCCAG
TGGAAACCATGGACACCCTCCGCACAGGGTGTCAATTTTCGTCCCGGACG
GGCGGTGCGTGTGTCTGCAGCCTCGTGCTGCTTTGTATTCACCACTTTGC
GCGTTTCTTGATCCCCACTCCCGCACCGCTTTCTCCTCAACGCCACCCCT
TCGTCGAACTCCTTACCTCCTCTTCACCTCCTTCCCAGTCGGTGGATGCC
ATCAGCTGGAAGGTGAAGCGGCCTCCGCTGGCCATTCTTCCGCTGGGGAC
AGGAAACGACCTCGCCCGCGTGCTGGGGTGGGGCGGGGGGTACACTGGGG
AGGACGTGGAGAACCTCCTTGATACCATCGAGAACGCTCAGGTGAGGGAC
AGAGATGCACTGGAGAACATCCGTCCTTGTAGGACTAACTAGGCATGTTT
CGTCTTTCTGGCTCTTTTGTGCGGGGGCTTCTCTTTTGGGGATCGGAAAC
ACTCGTGTGTTTTTTAATTTATGCTCGAACCAATGGGACAGAATCAAGAA
CGCACAGCCGTGTGATACATGAGATTACTGGTTGGCCTACTTCCTTCCGG
GCCTGTCGTGCTTAGTCTGGAGACCATCCCTCGCATGTGGCACTCAGCAA
GGGTGGGGGGGGGGGTGTACTCACAGTCGTGGATGCCGTAGTCGTTAGAC
CATTGACCACGCATCCCTATAAAGCCGGGGCGGAGCACACCGGGTTCTCA
CCGGACCGCATGAAGGGTGCGCTGCATCCTGCTACGGGTGTTCGGTATCT
TGTGCTTACTTTCTTGCGTAGGGATGACAGCTGCGTATGACTTAATTTAT
TTTCTGGTGCTTCACTTCCAGAGACAGTTGTAAGCACGGTGTAGCTACCT
CGAGGGTGCTTGACCAATCTCGACCCCGCACCACGTGATCTACACGACCA
CTAATCATGGATGCCGAAAAAAAAAGAAACCAAAGGCAAAAAAAAAGCGG
TAACCTGGTTGTCGAGCTCACGGAGTGATCGGCTTGTTTAACAACATCGC
TGCCATGCGACAAGAATCCAACCCCCATGGAAAACACCGGGGGGGGGGGT
ATAGGGGCGTTTTGGCGACTTAAAGTCTGATCGGTTTCGCTTTCCGACCA
AGGAAGAATCCGACGTCCGGCTGAATTGCGTTATGCCAGGATCAGTTCGG
TTCGAGAATTCCTGCAGGTGACATGACATGACAGAAGATACCACACACCC
CCTGGGCCGATTTTTTTAAACTCGATTACTCCACGAAGAAGAGGATGTGT
GGCTGAATTATTATGTTGTCGGAACGCTGTCGACGAGACAGGTCCAACGC
CTCCCGACGAGGCGGTTCCAACGCCGCCATTTTCGGCCCCACCGCTCTTT
TTGCTGTGGAGATCTCGAGCTTTGAAAATCGACCCCGGGGGTGTATATCT
TATGTCACGTCCAGGTAGTTAAAGACCAGAGTAACATCGGTCGTAGGGGA
AGAAATCCAGATGGAATGGCAAGATCGAGGACCAAAACTGCCTGACACGA
TTGCCGTTGTTTGGCTCTGGGTGCGCAGGTGACGATGCTGGACAGGTGGT
CGGTGTCGGTGGTGACCACAAGCAAGGGGTTCCGCAAGGGCCAGAAGGAC
CGCCAGCTCATCATGAACAACTACCTCGGCATCGGCGTGGACGGCCAGGT
GGCCCTGGATTTCCATAAGGTAATAGTATTCGTTTTTTTACGGTAGACAA
GGATTTTCGGCGCGGGGGGGTTGTGTGCCGGTCCTCTCTAATAGGTCCTG
CTATCGATGTTTGGCCCTCTTTGCTCGAGTGTTTGATGGGGGTTGGGGAG
CGTCGTTCGCTTCAAATGCGACGACGACGACTTCAGCAACCGTAGTGCCG
AACAGGCGTGACAACGATGAGCGGCAGCACCGCTGTTGCTCGTGGAGCGC
ATTTTTCGATTGTGGTTGTAGCCAACCACACGTCTCGATCGAAAGCTGCG
ACATACCCCGCCATATGACTACAACTACTTCAACAGCCTTGCGTGTTTCG
ACGCACGGTTTTTCTGCATCGTTGATGTCTTTTTTCCTATTGCATTCCCT
CCAGATGCGCGAGGCGAGACCCGTCCTCTTCTTCAACAGGCTCTTCAACA
AGGTGAGTGATCAGGTCTCCGCGTACCATCACAAATTATATATTCTCGTT
TAGAGTCCTGGTGTGTTAGTGTAGCTGCTGTGTGTGCATTTTGATTACTT
GTCCGTCTCTCCCTGTAGTCTTCCCCTCCCCTTTCCTTCACTCCCTACAA
CTTGGCTCTTTCCTGTTCTCCTTGTCCTTGTGTCAACCTATCATTTCTTC
CCACCACTTTTGACGGGCTCGTTCGTTCCTTCAACCGAGATGCATGGTCA
AGCGGACGCCTAAAAGTAGCGATCAAACTCGCCCTCCACCTCATCTCTCT
GCTCCTTCTAGGCCCTATATGCTCGACTGGCTTGTGTGGTCGTCTTACGC
CTGCGCAATCCTCTGCCGAACCTCCCATCCTCGTACGCACACGAGCATGA
GTTGTTGGATTTTTTTTCTTTGTACCGCCTCTGTTTCCCCCCCCTAGTCC
AACGTCCGCACTTACCGCGTCCCTTGCGGGTTTCGTCTATTTCCGCCGGC
TCAATCGCCTCGAGAAGGCGCGGGCAATGGTCTGGCAACGAATACATGCA
ATATGTGAGTACGACACCCTTACCCGCCGTTGCCCAACTCGCCTTGTGTG
GTGTCAGGCTCTGTATGCTCAGCTTGGCGTGCGCTCGGCCCTTGTGCGGG
CTTGCCACGACTTGCCGTCGCGGATAGAGCTGCGCTGTGATGGGCAGCTG
GTGGATCTGCCCGGTGAGGGGCGGTATGTCTGGTCTGGTCTCGTCTCAGT
GGGCGGCGGGCGTGTGTTGGATGCGTGCTACCTGTTGATCGGGTATCGAG
GGTGCGAAACGCCAGGAAGGGTTCTCAATTATATTTACCAATCCATGCCT
GTTGTCTGCGGAACGTGTTTTGTTTCGTCAAGCAGTGTCCCCTAAGAGTT
GGTCGCGTGCCAGCTATTCCCCCTCATCCTGCCTCTCCGGGCCCCCCACT
CGTCTTCACCTTGGTCGTCTTTTCCTTTCGCAGCGACCACCGCGAGCATC
ATCGCGTGTAACATCAACAGCTAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6856:823..5146-

>mRNA_Ecto-sp13_S_contig6856.17818.1 ID=mRNA_Ecto-sp13_S_contig6856.17818.1|Name=mRNA_Ecto-sp13_S_contig6856.17818.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=729bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6856:823..5146- (Ectocarpus species13 EcNAP12_S_4_19m)
TCAATCTGCGAGGAGAACATTCCGGACGACAGCTGCCCCCTCTTGGTGTT
CGTCAACTCCAAGTCGGGGGGCAAACAGGGCGGTGTGCTCATCAGCCGCT
TCCGGGCGCTTCTCAACCCTCTACAGGTGATCGACTTGAGCCAGGAGGAC
CCTCTAGAGGTGTTGCAACGCTTCCGGAACGTGGCTAACCTGAGGCTTCT
CGCCTGCGGGGGCGACGGGACTGTGGCCTGGCTTCTGCAGTCGGTGGATG
CCATCAGCTGGAAGGTGAAGCGGCCTCCGCTGGCCATTCTTCCGCTGGGG
ACAGGAAACGACCTCGCCCGCGTGCTGGGGTGGGGCGGGGGGTACACTGG
GGAGGACGTGGAGAACCTCCTTGATACCATCGAGAACGCTCAGGTGACGA
TGCTGGACAGGTGGTCGGTGTCGGTGGTGACCACAAGCAAGGGGTTCCGC
AAGGGCCAGAAGGACCGCCAGCTCATCATGAACAACTACCTCGGCATCGG
CGTGGACGGCCAGGTGGCCCTGGATTTCCATAAGATGCGCGAGGCGAGAC
CCGTCCTCTTCTTCAACAGGCTCTTCAACAAGGCTCTGTATGCTCAGCTT
GGCGTGCGCTCGGCCCTTGTGCGGGCTTGCCACGACTTGCCGTCGCGGAT
AGAGCTGCGCTGTGATGGGCAGCTGGTGGATCTGCCCGCGACCACCGCGA
GCATCATCGCGTGTAACATCAACAGCTAC
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