prot_Ecto-sp13_S_contig6854.17816.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6854.17816.1
Unique Nameprot_Ecto-sp13_S_contig6854.17816.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length152
Homology
BLAST of mRNA_Ecto-sp13_S_contig6854.17816.1 vs. uniprot
Match: D7FZE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE4_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 4.920e-47
Identity = 128/151 (84.77%), Postives = 128/151 (84.77%), Query Frame = 0
Query:    1 MLKRHLCVIDLKSSMLGLGSAGASVPFLSEKDLPSSARETQAEDLENKKPAAAEGSGSPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAEEAKVTQLTAMGFSREQAEGALSSTGGDAEQAAGLLLAQMDL 151
            MLKRHLCVIDLKSSMLGLGSAGASVPFLSEKDLPSSARETQAEDLENKKPAAAE SGS  S       XXXXXXXXXXX         XXXXXXXXX  XXXXXX  GAEEAKVTQLTAMGFSREQAEGALSSTGGDAEQAAGLLLAQMDL
Sbjct:  290 MLKRHLCVIDLKSSMLGLGSAGASVPFLSEKDLPSSARETQAEDLENKKPAAAESSGSSXSVETAPTGXXXXXXXXXXXAMDTETPATXXXXXXXXXPAXXXXXXAGGAEEAKVTQLTAMGFSREQAEGALSSTGGDAEQAAGLLLAQMDL 440          
BLAST of mRNA_Ecto-sp13_S_contig6854.17816.1 vs. uniprot
Match: A0A6H5L2G1_9PHAE (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2G1_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.830e-15
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = 0
Query:    1 MLKRHLCVIDLKSSMLGLGSAGASVPFLSEKDLPSSARETQA 42
            MLKRHLCVIDLKSSMLGLGSAGASVPFLSEKDLPSSARETQA
Sbjct:  290 MLKRHLCVIDLKSSMLGLGSAGASVPFLSEKDLPSSARETQA 331          
BLAST of mRNA_Ecto-sp13_S_contig6854.17816.1 vs. uniprot
Match: A0A7R9VUU1_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VUU1_9CHLO)

HSP 1 Score: 55.5 bits (132), Expect = 4.370e-6
Identity = 47/153 (30.72%), Postives = 68/153 (44.44%), Query Frame = 0
Query:    2 LKRHLCVIDLKSSMLGLGSAGASVPFLSEKDLPSSARE-----TQAEDLENKKPAAAEGSGSPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAEEAKVTQLTAMGFSREQAEGALSSTGGDAEQAAGLLLAQM 149
            LKRHLC IDL+++ L  G+  AS+PFLSE ++PS   +     ++A+   N +  A EG+G+ AS                                               A + K+ +L ++GF REQ E AL   GG+ E AA +L  QM
Sbjct:  335 LKRHLCCIDLRNNKLQFGTCDASLPFLSESEIPSDFGDMVDSVSEADAKRNME--ATEGAGASASAPSGQASTPPAAPAPGAAAGVAP------------------------AADDKLAKLISLGFPREQCEAALKMAGGNEEYAAAMLFEQM 461          
BLAST of mRNA_Ecto-sp13_S_contig6854.17816.1 vs. uniprot
Match: A0A8K0P251_LADFU (Uncharacterized protein (Fragment) n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0P251_LADFU)

HSP 1 Score: 52.4 bits (124), Expect = 1.910e-5
Identity = 24/38 (63.16%), Postives = 29/38 (76.32%), Query Frame = 0
Query:    1 MLKRHLCVIDLKSSMLGLGSAGASVPFLSEKDLPSSAR 38
            MLKRH C IDLK ++L +G+ G   PFLSE+DLP SAR
Sbjct:   67 MLKRHQCCIDLKRNVLRIGTTGTETPFLSERDLPESAR 104          
BLAST of mRNA_Ecto-sp13_S_contig6854.17816.1 vs. uniprot
Match: UPI000B8F9D1D (protein DDI1 homolog 2 n=1 Tax=Folsomia candida TaxID=158441 RepID=UPI000B8F9D1D)

HSP 1 Score: 52.4 bits (124), Expect = 5.100e-5
Identity = 25/38 (65.79%), Postives = 28/38 (73.68%), Query Frame = 0
Query:    1 MLKRHLCVIDLKSSMLGLGSAGASVPFLSEKDLPSSAR 38
            MLKRH C IDLK +ML LG+ G   PFLSE +LP SAR
Sbjct:  328 MLKRHQCTIDLKRNMLVLGTCGTETPFLSENELPESAR 365          
BLAST of mRNA_Ecto-sp13_S_contig6854.17816.1 vs. uniprot
Match: UPI0018D5C9A1 (protein DDI1 homolog 2-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D5C9A1)

HSP 1 Score: 52.0 bits (123), Expect = 6.890e-5
Identity = 25/47 (53.19%), Postives = 33/47 (70.21%), Query Frame = 0
Query:    1 MLKRHLCVIDLKSSMLGLGSAGASVPFLSEKDLPSSARETQAEDLEN 47
            MLKRH C IDLK+ +L +G+ G   PFL E +LP+ AR  ++E LEN
Sbjct:  318 MLKRHQCCIDLKNYILKIGTTGTETPFLGEAELPACARLNRSESLEN 364          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6854.17816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FZE4_ECTSI4.920e-4784.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2G1_9PHAE1.830e-15100.00Ubiquitin-like domain-containing protein n=1 Tax=E... [more]
A0A7R9VUU1_9CHLO4.370e-630.72Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A8K0P251_LADFU1.910e-563.16Uncharacterized protein (Fragment) n=1 Tax=Ladona ... [more]
UPI000B8F9D1D5.100e-565.79protein DDI1 homolog 2 n=1 Tax=Folsomia candida Ta... [more]
UPI0018D5C9A16.890e-553.19protein DDI1 homolog 2-like n=1 Tax=Patiria miniat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015940Ubiquitin-associated domainSMARTSM00165uba_6coord: 110..147
e-value: 8.8E-9
score: 45.2
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 110..142
e-value: 4.5E-9
score: 36.0
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 108..148
score: 13.173
NoneNo IPR availableGENE3D1.10.8.10coord: 109..151
e-value: 2.0E-12
score: 48.7
NoneNo IPR availablePANTHERPTHR12917:SF1AT13091Pcoord: 1..148
NoneNo IPR availablePANTHERPTHR12917ASPARTYL PROTEASE DDI-RELATEDcoord: 1..148
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 104..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6854contigEcto-sp13_S_contig6854:6091..7096 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6854.17816.1mRNA_Ecto-sp13_S_contig6854.17816.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6854 4752..7926 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6854.17816.1 ID=prot_Ecto-sp13_S_contig6854.17816.1|Name=mRNA_Ecto-sp13_S_contig6854.17816.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=152bp
MLKRHLCVIDLKSSMLGLGSAGASVPFLSEKDLPSSARETQAEDLENKKP
AAAEGSGSPASAETAPTGAGAGSAAPASSAMDTETPSTASAASASATPAT
AAAAGAGGAEEAKVTQLTAMGFSREQAEGALSSTGGDAEQAAGLLLAQMD
L*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015940UBA
IPR009060UBA-like_sf