mRNA_Ecto-sp13_S_contig6832.17789.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6832.17789.1 vs. uniprot
Match: D7FGQ3_ECTSI (Acyl-CoA synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGQ3_ECTSI) HSP 1 Score: 599 bits (1545), Expect = 2.340e-211 Identity = 302/376 (80.32%), Postives = 311/376 (82.71%), Query Frame = 1
Query: 1 VLTHHRGAALNSMSMSITWPLVGGDVKYLWTLPMFHCNGWCFPWAVTAVCGTHVCLRYVRAADILSAIASEGITHLCAAPGKPNVSAIVMNLLLGATEEEKAPVTEKMPPRVVXXXXXXXXXXXSVMRELEQELGIRPLSAYGLTEVYGPCTSSLWDDSWDDLEEDERGARLPWQAPSLVHEIYVAEKGGFDAVPADGVTLGEVLLRGNAVMKGYLNNEEATKEAFDQARTKTGGGQWFRTGDMAVQHPGGRVEIKDREKDIIISGGENISSIEVETALHQHEGVLHVAVVALPDPFWGETPVAVVEIKPGAKVSGEDIISHARGILAKFKCPKCPTKDVIFRELPKTATGKIQKHVLRAELMAERTANAKFDVLQ 1128
VLTHHRGAALNSMS+SITWPLVGGDVKYLWTLPMFHCNGWC PWA+TAV VMNLLLGATEEEKAPVTE+MPPRV+ SVMRELEQELGIRPLSAYGLTEVYGPCTS+LWDDSWDDLEEDERGARLPWQAPSLVHE+YVAEKGGFDAVPADGVTLGEVLLRGNAVMKGYLNNEEATKEAFDQ GQWFRTGDMAVQHPGGRVEIKDREKDIIISGGENISSIEVETALHQHEGVLHVAVVALPDPFWGETPVAV+E KPGAKVSGEDIISHAR ILAKFKCPKCP KDVIFRELPKTATGKIQKHVLRAEL+AERTA K +V Q
Sbjct: 217 VLTHHRGAALNSMSVSITWPLVGGDVKYLWTLPMFHCNGWCLPWAITAV---------------------------------------VMNLLLGATEEEKAPVTERMPPRVIQMMTGGAAPPPSVMRELEQELGIRPLSAYGLTEVYGPCTSNLWDDSWDDLEEDERGARLPWQAPSLVHEMYVAEKGGFDAVPADGVTLGEVLLRGNAVMKGYLNNEEATKEAFDQ-------GQWFRTGDMAVQHPGGRVEIKDREKDIIISGGENISSIEVETALHQHEGVLHVAVVALPDPFWGETPVAVIEAKPGAKVSGEDIISHARSILAKFKCPKCPIKDVIFRELPKTATGKIQKHVLRAELLAERTAKTKSNVPQ 546
BLAST of mRNA_Ecto-sp13_S_contig6832.17789.1 vs. uniprot
Match: A0A2E8XPE9_9PROT (Acyl-CoA synthetase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XPE9_9PROT) HSP 1 Score: 342 bits (876), Expect = 3.920e-110 Identity = 192/361 (53.19%), Postives = 230/361 (63.71%), Query Frame = 1
Query: 1 VLTHHRGAALNSMSMSITWPLVGGDVKYLWTLPMFHCNGWCFPWAVTAVCGTHVCLRYVRAADILSAIASEGITHLCAAPGKPNVSAIVMNLLLGATEEEKAPVTEKMPPRVVXXXXXXXXXXXSVMRELEQELGIRPLSAYGLTEVYGPCTSSLWDDSWDDLEEDERGARLPWQAP--SLVHEIYVAEKGGFDAVPADGVTLGEVLLRGNAVMKGYLNNEEATKEAFDQARTKTGGGQWFRTGDMAVQHPGGRVEIKDREKDIIISGGENISSIEVETALHQHEGVLHVAVVALPDPFWGETPVAVVEIKPGAKVSGEDIISHARGILAKFKCPKCPTKDVIFRELPKTATGKIQKHVLR 1077
V+ HHRGA LN++ TW GG V YLWTLPMFHCNGWCF W VTAV GT+VCLR + +A I +IAS GITHLC AP I+M +++ ATEEE+ P ++ V XXXXXX V+ + +E GI YGLTE+YGP W D WD+L +ER Q ++ ++ VA+ + VP DG TLGEV RGN MKGYL N +AT EAF G WF TGD+ V HP G VE+KDR KDIIISGGENISSIEVE AL++H V V VVA PD WGETP A +E+KPGA+V+ EDII H R LA FKCP+ V+F LPKT+TGKIQK LR
Sbjct: 200 VVFHHRGAYLNAVGNVFTWGATGGPV-YLWTLPMFHCNGWCFTWGVTAVGGTNVCLRNINSASIYESIASNGITHLCGAP-------IIMQMVVNATEEERRPFDQQ-----VEFMTAXXXXXXXVLAAMAEE-GINVTHVYGLTEIYGPAIICAWQDEWDELPLEERSRLQSRQGVPYEVLEDMMVADAETLEPVPQDGETLGEVFTRGNVTMKGYLKNPKATDEAF--------AGGWFHTGDLGVWHPDGYVELKDRSKDIIISGGENISSIEVEDALYKHAAVAAVGVVARPDEKWGETPCAFIELKPGAEVTEEDIIQHCRDNLAHFKCPRY----VVFGPLPKTSTGKIQKFKLR 534
BLAST of mRNA_Ecto-sp13_S_contig6832.17789.1 vs. uniprot
Match: UPI001F3A4730 (acyl-CoA synthetase n=1 Tax=Acidiphilium iwatense TaxID=768198 RepID=UPI001F3A4730) HSP 1 Score: 338 bits (866), Expect = 1.440e-108 Identity = 188/361 (52.08%), Postives = 223/361 (61.77%), Query Frame = 1
Query: 1 VLTHHRGAALNSMSMSITWPLVGGDVKYLWTLPMFHCNGWCFPWAVTAVCGTHVCLRYVRAADILSAIASEGITHLCAAPGKPNVSAIVMNLLLGATEEEKAPVTEKMPPRVVXXXXXXXXXXXSVMRELEQELGIRPLSAYGLTEVYGPCTSSLWDDSWDDLEEDERGARLPWQAPSL-VHE-IYVAEKGGFDAVPADGVTLGEVLLRGNAVMKGYLNNEEATKEAFDQARTKTGGGQWFRTGDMAVQHPGGRVEIKDREKDIIISGGENISSIEVETALHQHEGVLHVAVVALPDPFWGETPVAVVEIKPGAKVSGEDIISHARGILAKFKCPKCPTKDVIFRELPKTATGKIQKHVLR 1077
V+ HHRGA LN++ ++TW + G YLWTLPMFHCNGWCFPW VTA+ GTHVCLR + AA I +AI G+THLC AP IVMN++L A E PV R + +V+ +E LGIR YGLTEVYGP T W D W+DL ER A Q + V E + VAE VPADG T+GEV +RGN M GYL + AT+ AF G WF TGD+ V HP G +E+KDR KDIIISGGENIS+IEVET L++H VL AVVA PD WGE P A V +KPG S EDII+H R +A+FK PK VIF ELPKT+TGKIQK +LR
Sbjct: 205 VVYHHRGAYLNALGNAVTWSM-GQHPVYLWTLPMFHCNGWCFPWTVTALAGTHVCLRRIDAASIAAAIGCFGVTHLCGAP-------IVMNMMLNAPE----PVRAVFAGRGLAMMTAGAPPPAAVIEGMEA-LGIRVTHVYGLTEVYGPVTVCAWKDEWNDLPPSERAALRARQGVTYPVQEGLMVAESMTHAPVPADGATMGEVFMRGNITMMGYLKDPNATEAAF--------AGGWFATGDLGVTHPDGYIELKDRAKDIIISGGENISTIEVETVLYRHPAVLEAAVVAAPDAHWGEVPCAFVLLKPGMAASAEDIIAHCRASMARFKAPK----RVIFGELPKTSTGKIQKFLLR 540
BLAST of mRNA_Ecto-sp13_S_contig6832.17789.1 vs. uniprot
Match: UPI000E5D228B (acyl-CoA synthetase n=1 Tax=Algihabitans albus TaxID=2164067 RepID=UPI000E5D228B) HSP 1 Score: 336 bits (862), Expect = 4.550e-108 Identity = 186/364 (51.10%), Postives = 231/364 (63.46%), Query Frame = 1
Query: 1 VLTHHRGAALNSMSMSITWPLVGGDVKYLWTLPMFHCNGWCFPWAVTAVCGTHVCLRYVRAADILSAIASEGITHLCAAPGKPNVSAIVMNLLLGATEEEKAPVTEKMPPRVVXXXXXXXXXXXSVMRELEQELGIRPLSAYGLTEVYGPCTSSLWDDSWDDLEEDERGARLPWQ--APSLVHEIYVAEKGGFDAVPADGVTLGEVLLRGNAVMKGYLNNEEATKEAFDQARTKTGGGQWFRTGDMAVQHPGGRVEIKDREKDIIISGGENISSIEVETALHQHEGVLHVAVVALPDPFWGETPVAVVEIKPGAKVSGEDIISHARGILAKFKCPKCPTKDVIFRELPKTATGKIQKHVLRAEL 1086
V+ HHRGA LN++ +TW + V YLWTLPMFHC+GWCFPW VTA+ GTHVCLR V A I A+A EG+THLC AP IVM ++LGAT E+K P ++ V XXXX SV+ +++E G YGLTEVYGP W D+WD +E+ Q A ++ E+ VA+ +P DG TLGEV +RGN VMKGYL N AT A G WF TGD+ V HP G +++KDR KDIIISGGENISSIEVE+AL++H + VAVVA D WGETP A VE+KPGA+VS E++I+ R LA +KCP+ VIF ELPKT+TGKIQK LR ++
Sbjct: 202 VVYHHRGAYLNALGNIMTWGMQAHPV-YLWTLPMFHCSGWCFPWTVTALAGTHVCLRRVEAGAIYRALADEGVTHLCGAP-------IVMQMILGATPEQKRPFAQQ-----VQMMTAAXXXXASVLAAMQEE-GFEVTHVYGLTEVYGPAVVCAWQDAWDSRPIEEQADLKSRQGVAYPVLDELMVADPETLQPLPWDGETLGEVFMRGNIVMKGYLKNPTATDSAL--------AGGWFHTGDLGVTHPDGYIQLKDRSKDIIISGGENISSIEVESALYRHPAIAAVAVVAKADETWGETPCAFVELKPGAEVSAEELIAFCRENLAHYKCPR----HVIFTELPKTSTGKIQKFALREQI 539
BLAST of mRNA_Ecto-sp13_S_contig6832.17789.1 vs. uniprot
Match: A0A258DST7_9HYPH (Acyl-CoA synthetase (Fragment) n=1 Tax=Rhizobiales bacterium 32-66-8 TaxID=1970550 RepID=A0A258DST7_9HYPH) HSP 1 Score: 332 bits (852), Expect = 8.200e-108 Identity = 180/361 (49.86%), Postives = 224/361 (62.05%), Query Frame = 1
Query: 1 VLTHHRGAALNSMSMSITWPLVGGDVKYLWTLPMFHCNGWCFPWAVTAVCGTHVCLRYVRAADILSAIASEGITHLCAAPGKPNVSAIVMNLLLGATEEEKAPVTEKMPPRVVXXXXXXXXXXXSVMRELEQELGIRPLSAYGLTEVYGPCTSSLWDDSWDDLEEDERGARLPWQAP--SLVHEIYVAEKGGFDAVPADGVTLGEVLLRGNAVMKGYLNNEEATKEAFDQARTKTGGGQWFRTGDMAVQHPGGRVEIKDREKDIIISGGENISSIEVETALHQHEGVLHVAVVALPDPFWGETPVAVVEIKPGAKVSGEDIISHARGILAKFKCPKCPTKDVIFRELPKTATGKIQKHVLR 1077
V+ HHRGA L ++ +T + G YLWTLPMFHCNGWCFPW+V+ V GTHVCLR VRA I A+A G+TH+C AP IVM+ LL A E EK P+ P VV +V+ + QE G YGLTEVYGP + W+D W+ L ER AR Q S + + V + + VPADG TLGEV+ RGN VMKGYL N AT+ AF G WF +GD+ V+HP G V++KDR KDIIISGGENISSIEVE AL++H V AVVA PD WGETPVA VE++ GA + E++++H R LA FKCP+ ++F ++PKT+TGKIQK LR
Sbjct: 106 VVYHHRGAHLLAVGNVVTCSM-GKHPVYLWTLPMFHCNGWCFPWSVSLVAGTHVCLRQVRAKPIFEALADHGVTHMCGAP-------IVMSALLNAPESEKRPL-----PHVVEFITAAAPPPEAVLAAM-QESGFNVTHVYGLTEVYGPAVVNDWNDDWNSLPAAERAARKSRQGVRYSALEALDVLDPDTMEPVPADGATLGEVMFRGNVVMKGYLKNPSATQAAF--------AGGWFHSGDLGVKHPDGYVQLKDRSKDIIISGGENISSIEVEDALYKHPAVSAAAVVARPDDRWGETPVAFVELREGAHATVEELVAHCRAHLAHFKCPR----HIVFEQIPKTSTGKIQKFKLR 440
BLAST of mRNA_Ecto-sp13_S_contig6832.17789.1 vs. uniprot
Match: A0A843RF71_9PROT (AMP-binding protein n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A843RF71_9PROT) HSP 1 Score: 333 bits (855), Expect = 4.430e-107 Identity = 183/363 (50.41%), Postives = 222/363 (61.16%), Query Frame = 1
Query: 1 VLTHHRGAALNSMSMSITWPLVGGDVKYLWTLPMFHCNGWCFPWAVTAVCGTHVCLRYVRAADILSAIASEGITHLCAAPGKPNVSAIVMNLLLGATEEEKAPVTEKMPPRVVXXXXXXXXXXXSVMRELEQELGIRPLSAYGLTEVYGPCTSSLWDDSWDDLEEDERGARLPWQAPS--LVHEIYVAEKGGFDAVPADGVTLGEVLLRGNAVMKGYLNNEEATKEAFDQARTKTGGGQWFRTGDMAVQHPGGRVEIKDREKDIIISGGENISSIEVETALHQHEGVLHVAVVALPDPFWGETPVAVVEIKPGAKVSGEDIISHARGILAKFKCPKCPTKDVIFRELPKTATGKIQKHVLRAE 1083
V+ HHRGA LN++ W + G YLWTLPMFHCNGWCFPW VTA+ GTHVCLR VRA I AIA G+THLC AP IVM LLLGA EE+ K V +V+ + Q+ GI YGLTEVYGP W WDDL+ +++ A Q + ++ + VA+ + VP DG TLGEV +RGN VMKGYL N +AT++AF G WF TGD+AV+HP G +E+KDR KDIIISGGENISSIE+E L++H V VAVVA PD WGETP A VE+KPG + +I+ R LA FK P+ VIF LPKT+TGKIQK VLR +
Sbjct: 197 VVYHHRGAYLNAIGNMQVWGM-GPHPVYLWTLPMFHCNGWCFPWTVTALAGTHVCLRQVRAGAIYDAIADHGVTHLCGAP-------IVMQLLLGAAPEERRDFDHK-----VKFMTAAAPPPAAVLAAM-QDAGIAVTHVYGLTEVYGPVVVCAWHSEWDDLDIEDQAAMKARQGVNYPVLEGLMVADAETLEPVPCDGKTLGEVFMRGNVVMKGYLKNPQATEQAFS--------GGWFHTGDLAVRHPDGYIELKDRSKDIIISGGENISSIEIEDTLYRHPAVAGVAVVARPDAKWGETPCAFVELKPGTQADEAGLIAFCRDRLAHFKAPR----KVIFGPLPKTSTGKIQKFVLREQ 533
BLAST of mRNA_Ecto-sp13_S_contig6832.17789.1 vs. uniprot
Match: UPI00115E659F (acyl-CoA synthetase n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115E659F) HSP 1 Score: 333 bits (855), Expect = 6.260e-107 Identity = 181/362 (50.00%), Postives = 223/362 (61.60%), Query Frame = 1
Query: 1 VLTHHRGAALNSMSMSITWPLVGGDVKYLWTLPMFHCNGWCFPWAVTAVCGTHVCLRYVRAADILSAIASEGITHLCAAPGKPNVSAIVMNLLLGATEEEKAPVTEKMP-PRVVXXXXXXXXXXXSVMRELEQELGIRPLSAYGLTEVYGPCTSSLWDDSWDDLEEDERGARLPWQAP--SLVHEIYVAEKGGFDAVPADGVTLGEVLLRGNAVMKGYLNNEEATKEAFDQARTKTGGGQWFRTGDMAVQHPGGRVEIKDREKDIIISGGENISSIEVETALHQHEGVLHVAVVALPDPFWGETPVAVVEIKPGAKVSGEDIISHARGILAKFKCPKCPTKDVIFRELPKTATGKIQKHVLR 1077
V+ HHRGAALN++ +TW + G YLWTLPMFHCNGWCFPW +TA+ GTHVCLR V A I I S G+TH+C AP IV+N+L+ A +EK K+P P+ V +V+ +E+ +G + + YGLTE YGP W D W++L +E+ Q +L + VA+ VPADG T+GEV RGN VMKGYL N AT EAF G WF TGD+ V HP G +E+KDR KDIIISGGENIS+IEVE L+QH VL AVVA PD WGETP A + +K G KVS DII+ R LA FKCP+ V+F +LPKT+TGKIQK VLR
Sbjct: 205 VVYHHRGAALNAVGNVVTWGM-GHHPVYLWTLPMFHCNGWCFPWTITAMAGTHVCLRRVEAGRIFELIHSTGVTHMCGAP-------IVLNMLINAKPDEK-----KLPLPQTVNVMTAGAAPPAAVLDNIEK-MGFKVVHVYGLTETYGPAAVCAWHDEWNELPREEQAILKARQGVRYTLQDGLMVADALTLAPVPADGKTIGEVFFRGNIVMKGYLKNPTATSEAF--------AGGWFHTGDLGVMHPNGYIELKDRSKDIIISGGENISTIEVEGVLYQHPAVLEAAVVARPDEKWGETPCAFITLKEGHKVSEADIIAFCRSHLAHFKCPR----TVVFSDLPKTSTGKIQKFVLR 540
BLAST of mRNA_Ecto-sp13_S_contig6832.17789.1 vs. uniprot
Match: UPI001FBA756D (acyl-CoA synthetase n=3 Tax=Methylobacterium TaxID=407 RepID=UPI001FBA756D) HSP 1 Score: 332 bits (851), Expect = 2.040e-106 Identity = 180/362 (49.72%), Postives = 226/362 (62.43%), Query Frame = 1
Query: 1 VLTHHRGAALNSMSMSITWPLVGGDVKYLWTLPMFHCNGWCFPWAVTAVCGTHVCLRYVRAADILSAIASEGITHLCAAPGKPNVSAIVMNLLLGATEEEKAPVTEKMPPRVVXXXXXXXXXXXSVMRELEQELGIRPLSAYGLTEVYGPCTSSLWDDSWDDLEEDERGARLPWQAPS--LVHEIYVAEKGGFDAVPADGVTLGEVLLRGNAVMKGYLNNEEATKEAFDQARTKTGGGQWFRTGDMAVQHPGGRVEIKDREKDIIISGGENISSIEVETALHQHEGVLHVAVVALPDPFWGETPVAVVEIKPGAKVSGEDIISHARGILAKFKCPKCPTKDVIFRELPKTATGKIQKHVLRA 1080
V+ HHRGAAL ++ +T L G YLWTLPMFHCNGWCFPW ++ V GTHVCLR VRA + +A G+THLC AP IVM LL+ A++ E+ P+ PR V +V+ + E G YGLTE YGP + W WD L D+R AR Q ++ + V + + VPADG T+GEV++RGN VM+GYL N +AT+ AF G WFRTGD+ V+HP G V++KDR KDIIISGGENISSIEVE AL +H V AVVALPDP WGETP A +E++PGA + +D+I RG LA +K P+ V+F ELPKT+TGKIQK+VLRA
Sbjct: 202 VVYHHRGAALLALGNVVTGGL-GRHPVYLWTLPMFHCNGWCFPWTLSVVAGTHVCLRQVRAEAMYRLMAEHGVTHLCGAP-------IVMQLLINASDAERRPL-----PRRVAFFTAAAPPPEAVLAGMS-EAGFDVTHLYGLTESYGPAVVNEWHGEWDALSSDQRAARKARQGVRYPVLEALDVRDPETLEPVPADGTTMGEVMMRGNVVMRGYLKNPKATEAAFR--------GGWFRTGDLGVKHPDGYVQLKDRSKDIIISGGENISSIEVEDALFKHPAVAAAAVVALPDPKWGETPCAFIELRPGATATADDLIQWCRGRLASYKLPR----HVVFGELPKTSTGKIQKYVLRA 537
BLAST of mRNA_Ecto-sp13_S_contig6832.17789.1 vs. uniprot
Match: A0A4R5PJM6_9HYPH (Acyl-CoA synthetase n=4 Tax=Hyphomicrobiales TaxID=356 RepID=A0A4R5PJM6_9HYPH) HSP 1 Score: 331 bits (849), Expect = 4.700e-106 Identity = 179/365 (49.04%), Postives = 228/365 (62.47%), Query Frame = 1
Query: 1 VLTHHRGAALNSMSMSITWPLVGGDVKYLWTLPMFHCNGWCFPWAVTAVCGTHVCLRYVRAADILSAIASEGITHLCAAPGKPNVSAIVMNLLLGATEEEKAPVTEKMPPRVVXXXXXXXXXXXSVMRELEQELGIRPLSAYGLTEVYGPCTSSLWDDSWDDLEEDERGARLPWQA---PSLVHEIYVAEKGGFDAVPADGVTLGEVLLRGNAVMKGYLNNEEATKEAFDQARTKTGGGQWFRTGDMAVQHPGGRVEIKDREKDIIISGGENISSIEVETALHQHEGVLHVAVVALPDPFWGETPVAVVEIKPGAKVSGEDIISHARGILAKFKCPKCPTKDVIFRELPKTATGKIQKHVLRAEL 1086
V+ HHRGAAL + I + G YLWTLPMFHCNGWCFPW + V GTHVCLR+VRA + AIA G+THLC AP IVM+ LL A E EK + V SV+ + E G + YGLTE YGP + W WD L++ R R Q PSL ++ V + +AVP+DG T+GEV+ RGN VMKGYL N EAT++AF+ G WF +GD+ V HP G +++KDR KDIIISGGENISSIEVE AL++H + AVVA PD WGETP AV+E+KPGA ++ ++I+H +G+LA+FKCP+ V+FR++PKT+TGKIQK LR E+
Sbjct: 206 VVYHHRGAALMGYANVIASGM-GRHPVYLWTLPMFHCNGWCFPWTLAVVAGTHVCLRWVRAKAMYDAIADHGVTHLCGAP-------IVMSTLLNAPEAEKRDFEQ-----TVSFNTAAAPPPGSVLAGMA-EAGFEVVHLYGLTETYGPAVVNEWKAEWDALDKAARTTRKARQGVRYPSL-EDLSVRDPETMEAVPSDGETIGEVMFRGNIVMKGYLKNPEATRKAFE--------GGWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISSIEVEDALYKHPAIATCAVVAYPDEKWGETPCAVIELKPGATLTEAEVIAHCQGLLARFKCPR----KVVFRDVPKTSTGKIQKFALRNEI 543
BLAST of mRNA_Ecto-sp13_S_contig6832.17789.1 vs. uniprot
Match: A0A2S2CM32_9PROT (Acyl-CoA synthetase n=2 Tax=Azospirillum thermophilum TaxID=2202148 RepID=A0A2S2CM32_9PROT) HSP 1 Score: 333 bits (853), Expect = 5.500e-106 Identity = 183/366 (50.00%), Postives = 224/366 (61.20%), Query Frame = 1
Query: 1 VLTHHRGAALNSMSMSITWPLVGGDVKYLWTLPMFHCNGWCFPWAVTAVCGTHVCLRYVRAADILSAIASEGITHLCAAPGKPNVSAIVMNLLLGATEEEKAPVTEKMPPRVVXXXXXXXXXXXSVMRELEQELGIRPLSAYGLTEVYGPCTSSLWDDSWDDLEEDERGARLPWQAPSL--VHEIYVAEKGGFDAVPADGVTLGEVLLRGNAVMKGYLNNEEATKEAFDQARTKTGGGQWFRTGDMAVQHPGGRVEIKDREKDIIISGGENISSIEVETALHQHEGVLHVAVVALPDPFWGETPVAVVEIKPGAKVSGEDIISHARGILAKFKCPKCPTKDVIFRELPKTATGKIQKHVLRAELMA 1092
V+ HHRGA LN+M +TW L V YLWTLPMFHCNGWCFPW VT + GT+VCLR V A I A+A EG+THLC AP I+M LL+ A ++K + PR + +V+ E + +G + YGLTEVYGP T W D WD L +ER A Q + + + VA+ V DG TLGEV +RGN VMKGYL N +AT+EAF G WF TGD+ V HP G +E+KDR KDIIISGGENIS+IEVE L++H VL AVVA PD WGETP A V ++ GA V+ EDII + R LA FKCP+ V+F LPKT+TGKIQK+VLR + A
Sbjct: 257 VVYHHRGAYLNAMGNVVTWALPHHPV-YLWTLPMFHCNGWCFPWTVTLMAGTNVCLRAVTAKGIYDALADEGVTHLCGAP-------IIMGLLVNAPADQKRDI-----PRGIRMMTAGAAPPAAVI-EATERMGFQVTHVYGLTEVYGPVTICAWHDEWDALPMEERAALKARQGVNYATLEGLMVADPTTLQPVRMDGATLGEVFMRGNTVMKGYLKNAKATEEAF--------AGGWFHTGDLGVWHPDGYIELKDRSKDIIISGGENISTIEVEGVLYKHPAVLEAAVVARPDEKWGETPCAFVTLRDGAAVTEEDIIKYCRENLAHFKCPR----TVVFTALPKTSTGKIQKYVLREQARA 596 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6832.17789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6832.17789.1 >prot_Ecto-sp13_S_contig6832.17789.1 ID=prot_Ecto-sp13_S_contig6832.17789.1|Name=mRNA_Ecto-sp13_S_contig6832.17789.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=377bp VLTHHRGAALNSMSMSITWPLVGGDVKYLWTLPMFHCNGWCFPWAVTAVCback to top mRNA from alignment at Ecto-sp13_S_contig6832:2..6094+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6832.17789.1 ID=mRNA_Ecto-sp13_S_contig6832.17789.1|Name=mRNA_Ecto-sp13_S_contig6832.17789.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6093bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6832:2..6094+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6832:2..6094+ >mRNA_Ecto-sp13_S_contig6832.17789.1 ID=mRNA_Ecto-sp13_S_contig6832.17789.1|Name=mRNA_Ecto-sp13_S_contig6832.17789.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1131bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6832:2..6094+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |