prot_Ecto-sp13_S_contig12092.1777.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12092.1777.1
Unique Nameprot_Ecto-sp13_S_contig12092.1777.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length264
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12092.1777.1 vs. uniprot
Match: D8LD51_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD51_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 2.930e-84
Identity = 185/210 (88.10%), Postives = 187/210 (89.05%), Query Frame = 0 
Query:   60 PDRLTPPGTAGVTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-------QQPGTQALLALANAAAVGVAPSTRAPTRGRRLMRYLSHDAGPADGSSPAASNGTARARGFMRMNSRQGPSMQPPGSVPRMGRKKMALRRLNSLSAAAWGARAESVSDSGSRSPPPXXXXPGGRSVPALGGAGGAPAASRNTPTNPVPATPTTDQAFAATA 262
            PDRLTPPGTAGVTRXXXXXXXXXXXXXXXXXXXXXXXXXXXX        QQPGTQALLALANAAAVGVAP TR P RGR+LMRYLSHDAGPAD SSPAASNGTAR RGFMRMN+ QGPSMQPPGSVPRMGRKKMALRRLNSLSAAAWGARAESVSDSGSRSPPPX   PGGRSVPALGGAGGAP ASRN PTN VPA  TTD AFAATA
Sbjct:   59 PDRLTPPGTAGVTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQPGTQALLALANAAAVGVAPPTRTPRRGRKLMRYLSHDAGPADSSSPAASNGTARVRGFMRMNTSQGPSMQPPGSVPRMGRKKMALRRLNSLSAAAWGARAESVSDSGSRSPPPXRP-PGGRSVPALGGAGGAPPASRNAPTNRVPANTTTDPAFAATA 267
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BLAST of mRNA_Ecto-sp13_S_contig12092.1777.1 vs. uniprot
Match: A0A6H5JZI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZI2_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 3.890e-73
Identity = 145/158 (91.77%), Postives = 147/158 (93.04%), Query Frame = 0 
Query:  102 DQQPGTQALLALANAAAVGVAPSTRAPTRGRRLMRYLSHDAGPADGSSPAASNGTARARGFMRMNSRQGPSMQPPGSVPRMGRKKMALRRLNSLSAAAWGARAESVSDSGSRSPPPXXXXPGGRSVPALGGAGGAPAASRNTPTNPVPATPTTDQAFA 259
            DQQPGTQALLALANAAAVGV P T APTRGR+L RYLSHDAGP+DGSSPAASNGTARARGFMRMNSRQGPSMQPPGSVPRMGRKKMALRRLNSLSAAAWGARAESVSDSGSRSP  XXX  GGRSVPALGGAGGAPAASRN PTNPVPAT TTD AFA
Sbjct:  692 DQQPGTQALLALANAAAVGVPPPTHAPTRGRKLRRYLSHDAGPSDGSSPAASNGTARARGFMRMNSRQGPSMQPPGSVPRMGRKKMALRRLNSLSAAAWGARAESVSDSGSRSPXXXXXL-GGRSVPALGGAGGAPAASRNAPTNPVPATATTDPAFA 848
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12092.1777.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LD51_ECTSI2.930e-8488.10Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JZI2_9PHAE3.890e-7391.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12092contigEcto-sp13_S_contig12092:3974..4765 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12092.1777.1mRNA_Ecto-sp13_S_contig12092.1777.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12092 3974..4765 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12092.1777.1 ID=prot_Ecto-sp13_S_contig12092.1777.1|Name=mRNA_Ecto-sp13_S_contig12092.1777.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=264bp
MSPSRTESGAGGHSGGDDTAAAAGSRPPMSPRGSACGAGGDAGPPPKTPA
HPRGGGGANPDRLTPPGTAGVTRKAKKLVVMAEAAAAAAAAAGGGGGGDG
GDQQPGTQALLALANAAAVGVAPSTRAPTRGRRLMRYLSHDAGPADGSSP
AASNGTARARGFMRMNSRQGPSMQPPGSVPRMGRKKMALRRLNSLSAAAW
GARAESVSDSGSRSPPPPPRPPGGRSVPALGGAGGAPAASRNTPTNPVPA
TPTTDQAFAATAPS
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