mRNA_Ecto-sp13_S_contig6816.17758.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6816.17758.1
Unique NamemRNA_Ecto-sp13_S_contig6816.17758.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6816.17758.1 vs. uniprot
Match: D7FHM9_ECTSI (ThiF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM9_ECTSI)

HSP 1 Score: 462 bits (1189), Expect = 1.580e-163
Identity = 232/237 (97.89%), Postives = 234/237 (98.73%), Query Frame = 1 
Query:    1 GTELFDKVQKAKLLVVGAGGIGCELLKNLVQTGFRDIEVVDLDTIDKSNLNRQFLFRPHHVDKSKSLMAREAVLKFNPEARIVAHHGNVKEAKFGMAFIRKFDLVLNALDNIDARRHVNRLCLAVEKPLIESGTTGYLGQVTVIKKGETECYECKPKQTPKVHPICTIRSTPSKPVHCIVWAKQLFILMFGKAEESMLYEDPVTGQSAFMEQVLARPEAVAEGEGKAAKAVASEEAL 711
            GTELFDKVQKAKLLVVGAGGIGCELLKNLVQTGF+DIEVVDLDTIDKSNLNRQFLFRPHHVDKSKSLMAREAVLKFNPEARIVAHHGNVKEAKFGMAFIRKFDLVLNALDNIDARRHVNRLCLAVEKPLIESGTTGYLGQVTVIKKGETECYECKPKQTPKVHPICTIRSTPSKPVHCIVWAKQLF+LMFGKAEESMLYEDPVTGQSAFMEQVLARPEAV  GEGKAAKAV SEEAL
Sbjct:   12 GTELFDKVQKAKLLVVGAGGIGCELLKNLVQTGFQDIEVVDLDTIDKSNLNRQFLFRPHHVDKSKSLMAREAVLKFNPEARIVAHHGNVKEAKFGMAFIRKFDLVLNALDNIDARRHVNRLCLAVEKPLIESGTTGYLGQVTVIKKGETECYECKPKQTPKVHPICTIRSTPSKPVHCIVWAKQLFMLMFGKAEESMLYEDPVTGQSAFMEQVLARPEAVVAGEGKAAKAVVSEEAL 248
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BLAST of mRNA_Ecto-sp13_S_contig6816.17758.1 vs. uniprot
Match: A0A6H5JLI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLI2_9PHAE)

HSP 1 Score: 458 bits (1179), Expect = 5.330e-156
Identity = 229/237 (96.62%), Postives = 235/237 (99.16%), Query Frame = 1 
Query:    1 GTELFDKVQKAKLLVVGAGGIGCELLKNLVQTGFRDIEVVDLDTIDKSNLNRQFLFRPHHVDKSKSLMAREAVLKFNPEARIVAHHGNVKEAKFGMAFIRKFDLVLNALDNIDARRHVNRLCLAVEKPLIESGTTGYLGQVTVIKKGETECYECKPKQTPKVHPICTIRSTPSKPVHCIVWAKQLFILMFGKAEESMLYEDPVTGQSAFMEQVLARPEAVAEGEGKAAKAVASEEAL 711
            GTELFD+VQKAKLLVVGAGGIGCELLKNLVQTGF+DIEVVDLDTIDKSNLNRQFLFRPHHVDKSKSLMAREAVLKFNPEARIVAHHGNVKEAKFGMAFI+KF LVLNALDNIDARRHVNRLCLAV+KPLIESGTTGYLGQVTVIKKGETECYECKPKQTPKVHPICTIRSTPSKPVHCIVWAKQLF+LMFGKAEESMLYEDPVTGQSAFMEQVLARPEA+AEGEGKAAKAV SEEAL
Sbjct:   21 GTELFDQVQKAKLLVVGAGGIGCELLKNLVQTGFQDIEVVDLDTIDKSNLNRQFLFRPHHVDKSKSLMAREAVLKFNPEARIVAHHGNVKEAKFGMAFIKKFHLVLNALDNIDARRHVNRLCLAVDKPLIESGTTGYLGQVTVIKKGETECYECKPKQTPKVHPICTIRSTPSKPVHCIVWAKQLFMLMFGKAEESMLYEDPVTGQSAFMEQVLARPEALAEGEGKAAKAVVSEEAL 257
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BLAST of mRNA_Ecto-sp13_S_contig6816.17758.1 vs. uniprot
Match: A0A835ZFD7_9STRA (SUMO-activating enzyme subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFD7_9STRA)

HSP 1 Score: 331 bits (849), Expect = 3.030e-107
Identity = 166/223 (74.44%), Postives = 186/223 (83.41%), Query Frame = 1 
Query:    1 GTELFDKVQKAKLLVVGAGGIGCELLKNLVQTGFRDIEVVDLDTIDKSNLNRQFLFRPHHVDKSKSLMAREAVLKFNPEARIVAHHGNVKEAKFGMAFIRKFDLVLNALDNIDARRHVNRLCLAVEKPLIESGTTGYLGQVTVIKKGETECYECKPKQTPKVHPICTIRSTPSKPVHCIVWAKQLFILMFGKAEESMLYEDPVTGQ-SAFMEQVLARPEAVAE 666
            G EL  KVQ AKLLVVGAGGIGCELLKNLV TGF +I VVDLD ID SNLNRQFLFR  HV  SKS +A  AV  FNP+A IVAHHGNVK  +FG+ F+ +FDLVLNALDN+DARRHVNRLCLA +KPLIESGTTGYLGQVTVI+KGETECYEC+PK T K +PICTIRSTP KPVHC+VWAK+LF L+FG+AE+SMLYEDP   + SA+M  V ARPEA A+
Sbjct:   13 GDELLAKVQAAKLLVVGAGGIGCELLKNLVLTGFLNIHVVDLDIIDVSNLNRQFLFRQEHVGMSKSQVAAAAVKVFNPDATIVAHHGNVKSPEFGLNFVAQFDLVLNALDNVDARRHVNRLCLAKDKPLIESGTTGYLGQVTVIRKGETECYECQPKPTQKSYPICTIRSTPDKPVHCVVWAKELFRLLFGRAEDSMLYEDPAGDEPSAYMATVTARPEASAD 235
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BLAST of mRNA_Ecto-sp13_S_contig6816.17758.1 vs. uniprot
Match: A0A2P4XPZ2_9STRA (Ubiquitin-activating enzyme (E1) (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPZ2_9STRA)

HSP 1 Score: 311 bits (797), Expect = 2.340e-103
Identity = 149/219 (68.04%), Postives = 179/219 (81.74%), Query Frame = 1 
Query:    1 GTELFDKVQKAKLLVVGAGGIGCELLKNLVQTGFRDIEVVDLDTIDKSNLNRQFLFRPHHVDKSKSLMAREAVLKFNPEARIVAHHGNVKEAKFGMAFIRKFDLVLNALDNIDARRHVNRLCLAVEKPLIESGTTGYLGQVTVIKKGETECYECKPKQTPKVHPICTIRSTPSKPVHCIVWAKQLFILMFGKAEESMLYEDPVT-GQSAFMEQVLARPE 654
            G +L  KVQ AK+LVVGAGGIGCELLKNLV +GF DI ++DLDTID SNLNRQFLFR  HV +SK+L+A+E    FNP A+I AHHGN+K ++FG+ + ++F LVLNALDN+DAR+HVNRLCLA   PLIESGTTGYLGQV+VIKKGETECYEC PK T K +PICTIRSTP K VHCIVWAK+ + L+FGK E+SML+EDP    +SAFM+ V+  P+
Sbjct:   10 GEDLRSKVQSAKILVVGAGGIGCELLKNLVLSGFEDIHLIDLDTIDVSNLNRQFLFRSQHVGQSKALVAKEIAATFNPRAKITAHHGNIKSSQFGLEYFQQFALVLNALDNVDARKHVNRLCLATNTPLIESGTTGYLGQVSVIKKGETECYECTPKVTQKQYPICTIRSTPEKMVHCIVWAKECYKLLFGKIEDSMLWEDPTNEDKSAFMDLVMRAPD 228
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BLAST of mRNA_Ecto-sp13_S_contig6816.17758.1 vs. uniprot
Match: A0A3R7JAH1_9STRA (SUMO-activating enzyme subunit n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JAH1_9STRA)

HSP 1 Score: 317 bits (811), Expect = 1.120e-101
Identity = 153/227 (67.40%), Postives = 186/227 (81.94%), Query Frame = 1 
Query:    1 GTELFDKVQKAKLLVVGAGGIGCELLKNLVQTGFRDIEVVDLDTIDKSNLNRQFLFRPHHVDKSKSLMAREAVLKFNPEARIVAHHGNVKEAKFGMAFIRKFDLVLNALDNIDARRHVNRLCLAVEKPLIESGTTGYLGQVTVIKKGETECYECKPKQTPKVHPICTIRSTPSKPVHCIVWAKQLFILMFGKAEESMLYEDPVTGQ-SAFMEQVLARPEAVAEGEGK 678
            G +L  KVQ AK+L+VGAGGIGCELLKNLV +GF DI ++DLDTID SNLNRQFLFR HHV +SK+L+ARE  + FNP+A+I AHHGN+K ++FG+ + ++F LVLNALDN+DAR+HVNRLCLA  KPLIESGTTGYLGQV+VIKKGETECYEC PK T K +PICTIRSTP K VHCIVWAK+ + L+FGK E+SML+EDP+  + SAFM+ V   P+   +  GK
Sbjct:   10 GEDLQSKVQNAKILMVGAGGIGCELLKNLVLSGFVDIHLIDLDTIDVSNLNRQFLFRSHHVGQSKALVAREIAMSFNPKAKITAHHGNIKSSQFGVDYFQQFALVLNALDNVDARKHVNRLCLATNKPLIESGTTGYLGQVSVIKKGETECYECTPKVTQKQYPICTIRSTPEKMVHCIVWAKECYKLLFGKMEDSMLWEDPINEEKSAFMDFVTRSPDMKFDDVGK 236
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BLAST of mRNA_Ecto-sp13_S_contig6816.17758.1 vs. uniprot
Match: A0A3M6VQM9_9STRA (SUMO-activating enzyme subunit n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQM9_9STRA)

HSP 1 Score: 312 bits (799), Expect = 7.020e-100
Identity = 146/214 (68.22%), Postives = 182/214 (85.05%), Query Frame = 1 
Query:    1 GTELFDKVQKAKLLVVGAGGIGCELLKNLVQTGFRDIEVVDLDTIDKSNLNRQFLFRPHHVDKSKSLMAREAVLKFNPEARIVAHHGNVKEAKFGMAFIRKFDLVLNALDNIDARRHVNRLCLAVEKPLIESGTTGYLGQVTVIKKGETECYECKPKQTPKVHPICTIRSTPSKPVHCIVWAKQLFILMFGKAEESMLYEDPVTG-QSAFMEQV 639
            G ++  K+Q+AK+LVVGAGGIGCELLKNLV +GF DI ++DLDTID SNLNRQFLFR HHV +SK+L+A+E  +KFNP+A++ AHHGN+K ++FG+ + ++F LVLNALDN+DAR+HVNRLCLA + PLIESGTTGYLGQV+VIKKGETECYEC PK + K +PICTIRSTP K VHCIVWAK+ + L+FG AE+SML+EDP    +SAFM+ V
Sbjct:   10 GEDMKLKLQRAKILVVGAGGIGCELLKNLVLSGFMDIHLIDLDTIDVSNLNRQFLFRSHHVGQSKALVAKEIAMKFNPKAKVTAHHGNIKSSQFGLEYFQQFSLVLNALDNVDARKHVNRLCLATDTPLIESGTTGYLGQVSVIKKGETECYECTPKVSQKQYPICTIRSTPDKMVHCIVWAKECYKLLFGNAEDSMLWEDPTNNDKSAFMDLV 223
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BLAST of mRNA_Ecto-sp13_S_contig6816.17758.1 vs. uniprot
Match: G4YWP8_PHYSP (SUMO-activating enzyme subunit n=6 Tax=Phytophthora TaxID=4783 RepID=G4YWP8_PHYSP)

HSP 1 Score: 311 bits (796), Expect = 2.020e-99
Identity = 152/227 (66.96%), Postives = 183/227 (80.62%), Query Frame = 1 
Query:    1 GTELFDKVQKAKLLVVGAGGIGCELLKNLVQTGFRDIEVVDLDTIDKSNLNRQFLFRPHHVDKSKSLMAREAVLKFNPEARIVAHHGNVKEAKFGMAFIRKFDLVLNALDNIDARRHVNRLCLAVEKPLIESGTTGYLGQVTVIKKGETECYECKPKQTPKVHPICTIRSTPSKPVHCIVWAKQLFILMFGKAEESMLYEDPVT-GQSAFMEQVLARPEAVAEGEGK 678
            G +L  KVQ AK+LVVGAGGIGCELLKNLV +GF DI ++DLDTID SNLNRQFLFR  HV +SK+L+ARE  ++FNP+A+I AHHGN+K ++F + + ++F LVLNALDN+DAR+HVNRLCLA   PLIESGTTGYLGQV+VIKKGETECYEC PK T K +PICTIRSTP K VHCIVWAK+ + L+FGK E+SML+EDP    +SAFM+ V   P    +G GK
Sbjct:   10 GEDLRGKVQSAKILVVGAGGIGCELLKNLVLSGFVDIHLIDLDTIDVSNLNRQFLFRSQHVGQSKALVAREIAMEFNPKAQITAHHGNIKSSQFDIDYFQQFALVLNALDNVDARKHVNRLCLATNTPLIESGTTGYLGQVSVIKKGETECYECTPKVTQKQYPICTIRSTPEKMVHCIVWAKECYKLLFGKTEDSMLWEDPANEDKSAFMDLVTRSPNMKFDGVGK 236
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BLAST of mRNA_Ecto-sp13_S_contig6816.17758.1 vs. uniprot
Match: A0A067BRX7_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BRX7_SAPPC)

HSP 1 Score: 301 bits (772), Expect = 6.350e-99
Identity = 144/217 (66.36%), Postives = 176/217 (81.11%), Query Frame = 1 
Query:    1 GTELFDKVQKAKLLVVGAGGIGCELLKNLVQTGFRDIEVVDLDTIDKSNLNRQFLFRPHHVDKSKSLMAREAVLKFNPEARIVAHHGNVKEAKFGMAFIRKFDLVLNALDNIDARRHVNRLCLAVEKPLIESGTTGYLGQVTVIKKGETECYECKPKQTPKVHPICTIRSTPSKPVHCIVWAKQLFILMFGKAEESMLYEDPVTG-QSAFMEQVLAR 648
            G +L  ++  +K+LVVGAGGIGCELLKNLV +GF DI +VDLDTID SNLNRQFLFR  HV  SK+++ARE  L+FNP A+I AHH N+K +++ + +  +F LVLNALDN+DAR+HVNRLCLA   PLIESGTTGYLGQV+VIKKGETECYEC  K T KV+PICTIRSTP K VHCIVWAK+ + L+FGK ++SML+EDP    +SAFM+ +LAR
Sbjct:    9 GDDLTRQIHASKILVVGAGGIGCELLKNLVLSGFVDITIVDLDTIDVSNLNRQFLFRSQHVGMSKAIVAREVALQFNPSAKITAHHENIKSSRYAIEYFEQFALVLNALDNVDARKHVNRLCLAANVPLIESGTTGYLGQVSVIKKGETECYECTEKATAKVYPICTIRSTPDKMVHCIVWAKECYKLLFGKTQDSMLWEDPTNDDKSAFMDSILAR 225
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BLAST of mRNA_Ecto-sp13_S_contig6816.17758.1 vs. uniprot
Match: A0A2P4YST3_9STRA (SUMO-activating enzyme subunit n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YST3_9STRA)

HSP 1 Score: 308 bits (789), Expect = 1.840e-98
Identity = 148/219 (67.58%), Postives = 178/219 (81.28%), Query Frame = 1 
Query:    1 GTELFDKVQKAKLLVVGAGGIGCELLKNLVQTGFRDIEVVDLDTIDKSNLNRQFLFRPHHVDKSKSLMAREAVLKFNPEARIVAHHGNVKEAKFGMAFIRKFDLVLNALDNIDARRHVNRLCLAVEKPLIESGTTGYLGQVTVIKKGETECYECKPKQTPKVHPICTIRSTPSKPVHCIVWAKQLFILMFGKAEESMLYEDPVT-GQSAFMEQVLARPE 654
            G +L  KVQ AK+LVVGAGGIGCELLKNLV +GF  I ++DLDTID SNLNRQFLFR  HV +SK+L+A+E    FNP A+I AHHGN+K ++FG+ + ++F LVLNALDN+DAR+HVNRLCLA   PLIESGTTGYLGQV+VIKKGETECYEC PK T K +PICTIRSTP K VHCIVWAK+ + L+FGK E+SML+EDP    +SAFM+ V+  P+
Sbjct:    4 GEDLRSKVQSAKILVVGAGGIGCELLKNLVLSGFEGIHLIDLDTIDVSNLNRQFLFRSQHVGQSKALVAKEIASTFNPRAKITAHHGNIKSSQFGLEYFQQFALVLNALDNVDARKHVNRLCLATNTPLIESGTTGYLGQVSVIKKGETECYECTPKVTQKQYPICTIRSTPEKMVHCIVWAKECYKLLFGKIEDSMLWEDPTNEDKSAFMDLVMRAPD 222
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BLAST of mRNA_Ecto-sp13_S_contig6816.17758.1 vs. uniprot
Match: A0A7S3H7R8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H7R8_9STRA)

HSP 1 Score: 300 bits (768), Expect = 1.930e-98
Identity = 140/217 (64.52%), Postives = 174/217 (80.18%), Query Frame = 1 
Query:    1 GTELFDKVQKAKLLVVGAGGIGCELLKNLVQTGFRDIEVVDLDTIDKSNLNRQFLFRPHHVDKSKSLMAREAVLKFNPEARIVAHHGNVKEAKFGMAFIRKFDLVLNALDNIDARRHVNRLCLAVEKPLIESGTTGYLGQVTVIKKGETECYECKPKQTPKVHPICTIRSTPSKPVHCIVWAKQLFILMFGKAEESMLYEDPVTGQSAFMEQVLARP 651
            G E F+K+Q AKLL+VGAGGIGCE+LKNL  TGF+ IE++DLDTID SNLNRQFLFRP HV + K+++A  A  +FNP+  +V++H N+K  KF +A+  KF+LVLNALDNIDARRHVNRLCLA  +PLI+SGTTGYLGQV  I KG+T CYEC PK T KV+PICTIRSTP KPVHCIVWAK+ F L+F +  ESML+ED  TG+++   Q+++ P
Sbjct:   24 GQENFEKIQNAKLLIVGAGGIGCEILKNLALTGFKYIELIDLDTIDVSNLNRQFLFRPEHVGQPKAIVAGNAAKRFNPDLTVVSYHENIKNPKFNLAYFEKFNLVLNALDNIDARRHVNRLCLAANRPLIDSGTTGYLGQVVPILKGKTACYECYPKPTQKVYPICTIRSTPDKPVHCIVWAKECFKLLFNQPSESMLFEDESTGETSTYMQLISYP 240
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6816.17758.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHM9_ECTSI1.580e-16397.89ThiF domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JLI2_9PHAE5.330e-15696.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZFD7_9STRA3.030e-10774.44SUMO-activating enzyme subunit n=1 Tax=Tribonema m... [more]
A0A2P4XPZ2_9STRA2.340e-10368.04Ubiquitin-activating enzyme (E1) (Fragment) n=1 Ta... [more]
A0A3R7JAH1_9STRA1.120e-10167.40SUMO-activating enzyme subunit n=3 Tax=Phytophthor... [more]
A0A3M6VQM9_9STRA7.020e-10068.22SUMO-activating enzyme subunit n=2 Tax=Peronospora... [more]
G4YWP8_PHYSP2.020e-9966.96SUMO-activating enzyme subunit n=6 Tax=Phytophthor... [more]
A0A067BRX7_SAPPC6.350e-9966.36Uncharacterized protein (Fragment) n=1 Tax=Saprole... [more]
A0A2P4YST3_9STRA1.840e-9867.58SUMO-activating enzyme subunit n=1 Tax=Phytophthor... [more]
A0A7S3H7R8_9STRA1.930e-9864.52Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6816contigEcto-sp13_S_contig6816:322..6899 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score463.0
Seed ortholog evalue8.4e-128
Seed eggNOG ortholog2880.D7FHM9
Preferred nameUBA2
Model size714
KEGG koko:K10685
KEGG Pathwayko04120,map04120
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000166,GO:0000287,GO:0002119,GO:0002164,GO:0002376,GO:0002682,GO:0002684,GO:0003002,GO:0003006,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005911,GO:0006355,GO:0006464,GO:0006807,GO:0006955,GO:0006959,GO:0007275,GO:0007389,GO:0008047,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008641,GO:0009506,GO:0009790,GO:0009791,GO:0009792,GO:0009793,GO:0009889,GO:0009952,GO:0009966,GO:0009967,GO:0009987,GO:0010154,GO:0010468,GO:0010556,GO:0010646,GO:0010647,GO:0016740,GO:0016874,GO:0016877,GO:0016925,GO:0017076,GO:0018193,GO:0018205,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0019789,GO:0019899,GO:0019948,GO:0022414,GO:0023051,GO:0023056,GO:0030054,GO:0030234,GO:0030554,GO:0031323,GO:0031326,GO:0031347,GO:0031349,GO:0031510,GO:0031974,GO:0031981,GO:0032182,GO:0032183,GO:0032446,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033134,GO:0034121,GO:0034123,GO:0034124,GO:0034126,GO:0035639,GO:0036094,GO:0036211,GO:0043085,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044388,GO:0044390,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045088,GO:0045089,GO:0046872,GO:0046982,GO:0046983,GO:0048316,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048608,GO:0048731,GO:0048856,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051252,GO:0055044,GO:0060255,GO:0061458,GO:0061650,GO:0061656,GO:0065007,GO:0065009,GO:0070013,GO:0070647,GO:0071704,GO:0080090,GO:0080134,GO:0097159,GO:0097367,GO:0098772,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1903506,GO:2000112,GO:2001141
Exons7
EggNOG free text desc.SUMO activating enzyme activity
EggNOG OGsCOG0476@1,KOG2013@2759
EC6.2.1.45
Cds size711
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6816.17758.1prot_Ecto-sp13_S_contig6816.17758.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6816 322..6897 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463936.4535165-CDS-Ecto-sp13_S_contig6816:321..3851681463936.4535165-CDS-Ecto-sp13_S_contig6816:321..385Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6816 322..385 +
1681463936.4666212-CDS-Ecto-sp13_S_contig6816:1605..17361681463936.4666212-CDS-Ecto-sp13_S_contig6816:1605..1736Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6816 1606..1736 +
1681463936.477871-CDS-Ecto-sp13_S_contig6816:2076..22281681463936.477871-CDS-Ecto-sp13_S_contig6816:2076..2228Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6816 2077..2228 +
1681463936.4885616-CDS-Ecto-sp13_S_contig6816:2810..28831681463936.4885616-CDS-Ecto-sp13_S_contig6816:2810..2883Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6816 2811..2883 +
1681463936.502179-CDS-Ecto-sp13_S_contig6816:4694..47831681463936.502179-CDS-Ecto-sp13_S_contig6816:4694..4783Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6816 4695..4783 +
1681463936.5109627-CDS-Ecto-sp13_S_contig6816:5745..58721681463936.5109627-CDS-Ecto-sp13_S_contig6816:5745..5872Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6816 5746..5872 +
1681463936.5200562-CDS-Ecto-sp13_S_contig6816:6822..68971681463936.5200562-CDS-Ecto-sp13_S_contig6816:6822..6897Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6816 6823..6897 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6816.17758.1

>prot_Ecto-sp13_S_contig6816.17758.1 ID=prot_Ecto-sp13_S_contig6816.17758.1|Name=mRNA_Ecto-sp13_S_contig6816.17758.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=237bp
GTELFDKVQKAKLLVVGAGGIGCELLKNLVQTGFRDIEVVDLDTIDKSNL
NRQFLFRPHHVDKSKSLMAREAVLKFNPEARIVAHHGNVKEAKFGMAFIR
KFDLVLNALDNIDARRHVNRLCLAVEKPLIESGTTGYLGQVTVIKKGETE
CYECKPKQTPKVHPICTIRSTPSKPVHCIVWAKQLFILMFGKAEESMLYE
DPVTGQSAFMEQVLARPEAVAEGEGKAAKAVASEEAL
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mRNA from alignment at Ecto-sp13_S_contig6816:322..6899+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6816.17758.1 ID=mRNA_Ecto-sp13_S_contig6816.17758.1|Name=mRNA_Ecto-sp13_S_contig6816.17758.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6578bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6816:322..6899+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGTACGGAGCTGTTTGACAAGGTGCAGAAGGCGAAGCTTCTCGTGGTTGG
AGCGGGGGGCATCGGTGAGAAAATCTTTGAATCACGAATACTGGAATACG
TACCCTACCCTTTGTTGCGGAAGATACCGCACCCCCCCCTGGACCGATGT
TCAAAGGTCGATTACCGCATGTAGGAGGCGGAGAGATGGCACCCCCCCAA
GACCGACTTTCGTAGGTCTATTTCTCCACAACCGAGGAGGTGCGGGAAAA
GTCCGATACTTCTACAGGAAGCCCACCATTTTTGGCACACTGCTGCTGGT
TGTTACGGAGAAGTCGATCTTTGAAAAAGCTGTCTTACGGGGGCTGCGTT
CTCTCCGCTTCTTACGATACTCAGAGCAAAAACAGTGACGGTAAAGAAAA
TGTCGGGAGGCGTTGGAGTCGTCTCGCTGACAGGCTTTCCGAACACTCAT
CATTTGGTTGTTGCGTCCGCTTCGTTGCGAAGCAATCGAGCCTTGAAAAG
TTGCTCTAGGGTGGGTGTGTCATCTCATGCAACCTATGGTACGGACCGCG
CCACCGCTCAAAGCGTGTGCTGAATACAGCCTGGTGTTAGGTTTTCGGTG
TATGTCTCCGATTCAGAGAGTGTAGATATTGGATGCTAAGTCGGAAGAGG
GCGTGACGGAGCAGAGACGTGAGCGTTGGCGAAAGCCCACATCTGTTTTG
GTGCCGCACTGTCAAAAGGCTGCAGCTGCGGCCCGACAACTAGGCGACAT
CTGGGTCCATACGATGCACAACCCACAACTGTACGCGCCATCGCAGACCC
AATCGCCAGGAATGCGGTTCGTCAATTGCAGCGAACAGCTCCTGTTTGTA
CACCGGCATGGCCAGGGACTGCTTTTGTGACGGCGCGTACAGCAGCGACC
TGTGAATGGCACGGATCCAATTTTGTTGAGTTTTGTAGTCTTTGGTTGGA
TGCCGGTCTACTCTTTCAACATACGGCAGATGTTCTTGTTATATTTTCCT
CTGCTGCACCGTTCCCGATGAAGTGCCCGGGTGCACAAGGTGGTGATGTA
CACTCGTTCACAACTTTCAAGTGCCACTGATCTATTGGGGGCTTTTTTGT
CATGTTTCAGCACATCCACACAAGAGGCCAGCCCACAAGGGGCCAGCCGG
GCCAGCCAGCACGCCCTCATGTGCACTGTTCTGCTTTTCGTTTGTCCCAA
ACTTCACGCATCCGCACAAGACGCCACATCCACCGTTAATCTGTCTTTTT
TTTCGTTGTCAAACTCATGACGTCCACCCGCAAGGTTGCGAGCTGCTGAA
GAACCTGGTGCAGACCGGTTTCCGGGACATCGAAGTGGTGGACTTGGATA
CGATCGACAAGTCCAACCTGAACAGGCAGTTCCTCTTCCGACCGCACCAC
GTCGACAAGAGCAAGGTGCGTGTGGGTATGTATCTCCTGACGTCGAACGA
CGCGTCCGTTTCGTTACAAAGTGTGGTAAAAATTACGGCGATGGATGTTG
GATAGGAATATGCCTAGAATTTCGTGCAACAACAGCACCCGACAACCAAC
ACGACAGGGCAGTAGCGACAACAATAGCGACGACGATGGCGGCAGCAACA
TTCAAACATCGAGGAAATGCAAGAAGGGCAACAACAACGGAAGTAACACA
GCGTCTACAACGACGCATGCCGTCGATTTCCCTCCTTCGCCGCGTATCCC
CGCCTGATGCTCGACCCTCGCGCATTGCGATGTGCGCATACATGCATGGA
TGAAGTCGTTGATGGCGAGGGAGGCGGTGCTCAAATTCAACCCCGAGGCG
AGGATCGTGGCCCACCATGGCAACGTCAAGGAGGCCAAGTTCGGCATGGC
CTTCATCAGAAAGTTCGACCTCGTCCTGAATGCCCTCGACAACATTGATG
CCCGAAGGTGAGGTGTACTCATAGCCGTGCATGCCGTAGTCGTACGACCA
TTGGTCTCGCATCCCTACGAAGCCAGGACGGAGCACGCCGGGTTCTCACC
GAACAAGGCTCTCACATCACCATGTACGAAGCGCCGCGAGGGGTGGGGGT
GGGGGGGAGGGGGTTGCTTGAAAAGGACATTCGAGACGATAACACCGGCG
TGGTCCAGGTCCTGATTCCGCCCCGATGCGGTTTTTCATCCGTACGCTCG
GTCAAGATTACATGAAGGCAACAGTTGTTGTTGATGTGCTCGGTGCCATT
GGTTTCTGTCCTCGCTCCAAGGGGTCATGTTTTGTTTATCGGAAGACCGT
TCAACCCCCGGTGGAGTGTGGTGTGTTTTGCTTGACGGCCGCCCCTGCTG
ATGCTGTTGGTCCTGGCAGCGCCACGCAATCTCTCACGCAAACTTCCCTT
CCCCTACCTCGTCAAGGGTAAGCACCCACCGACTGGCGCTTCATTTGCCC
TTCTCCACCAAACCTCATCATATCTCGCTCAAAACGACCATGTATCTAAA
CGGCGGACGATTTCTGCCCCCTCCACTGTGAACGGAAAGGCATGTGAACC
GGCTTTGTCTGGCGGTAGAAAAGCCACTGATCGAGAGCGGAACTACTGGA
TACCTTGGCCAGGTAAGAACGTCTTTGGTCCTGTACCCGTTGAGCATGGG
TGCGACAAACAAGGGGTGGAGTTAGTATGGATGTGGGTGAGTTTGACTCA
GCGCAATAATACGGGGGAGCTTCCCGTGGTTGGTGAGGCGGTGAGGGTCG
TTTAGACCGGAACAGGCTCACGGCCCTGTGACAAAAGTTGTTGTTACTAC
AAGTGATCCCTCCGGAGCGAGATTGTGAAGTACCATTGTCGTATCAAGGG
GTGATCAAAAGTAAAGCAGGCGGCAGGACCCTCAGCTGGCTGCCAGCCGC
CAGTCGTGAAGTTTCCCAAGGTCAAACGGTTCACATAGGTTGGCGTCTTT
TTGACTCGAAGAGCCAGACAAACCTCCAAGAAGAGAAATTTCAAATCTGT
GTACAGTCTTGTGGGAACATCAAGCGCCAGTGAGGCTGAAATGGATGTTT
TCTAAGGGTTTGGAAGCCAAAGAAGGGCGCGCGCATGAAGCCGCTTGCAC
GATCTGCCCGATACAAGCTTCCGATATCGATGCGACGCACACGCAAGCAC
TCTCACGAGGGGATGCCAGCCAGCCCTCCCGCCCCCGCCCCGTTGTTCTT
TCGGGAGCGCGGAAGTGTGGGTGATGTGGTTGTTGGCTCTCCCACAAGCG
TGTTGTTTGTGTGTGTTTTGCTCTGCCCATTTGACCGCCTGCCCGCCGAA
GACCTGTGGCCGGGGAGCGCGAAGGTGGGGTAGACATTTTTTTTTTTCGT
TAGGTCGTTTCGAGGAGATAGTTGTGGATTACTCTTTTATTTCGGGGGTG
TTTGCTGTTGAATCCACTCGCACCGTGTCCGACGTACAGCAGAGCGCTAC
AGCTGTCCAGCGTCAAGGCTTTCCTGTCATTTCGTTTGATATGATTATAC
TCATGTCCGTTGGGAACGCTTGGGGTTTCTTGTGATTTTTTTGAAGGTTT
CAGGGAGGGGAGGGAGGCGGGGGGTTCAAAGGCTTTATTGCAGTCGTCGA
GCGTGTACGGCACCAATATCACACCCATGCTCGTTTGCAACGATCTTGTG
GGATGTCCAGCCGCGAATCACCTTGGTGTTTCTTTCGTGCGGCAGTATCT
CACTGAGAACTGGACACGACCATGGTTTGGATTTATTCCGCGGAGCCCCC
CTCGTGCGGAGGCCTGTTCGTGTCCATCAACCCGCTCCTGTTCCACGATG
TGTAGCGTATTCCGCGGAGCCCCCCCCGCAAACGGAGGCGTGCGCGTGCT
TGTCCAGAGTCCATCAATCCGCGTTTCTGTTAGACGAGACAACACGCTTG
TTATACCTGATCAATCCGTCGTGAGTTGATCGGGAATCGCTTCAGATTCT
CTCTCTTGTGTCTGAATGTTCGGGGGCTTGGTTTCTTTTTTGATCGGTTT
GAATCAGTCTTACAACACACGACATGACGGAGAGTTTCTCGCCGATATTT
TTGTCGTTGACCCCGTAGACGAAGAAAACTAAAGGGGACATGCACGGTAT
TTGTACCTGTTTCTGTGATAGCACCTGCTGGCATCACTGATATTATTTTT
TCGGTGTGCACGTTTAAATCGACTCGAAATAAGCCAACTACCCAGCCGGT
TTCCCTCCATCCACTGCAAAGACTCCAACACATCCCCTTCGACTACTGTC
TGGATTTATGTCGAATGGTTTCTGTGTTTGTATCTTTGTTTCCCAAAATC
TACGGCGGATTTTGTTCTGTTCATCACTAATCGTCAGCACGCGCACTCAC
ACGCAGAATTTCTAGCGTATTGGAGCTCCAATCCGTGGTCCCACATTCCT
CTTTTGACCTTTTTTTTTTTAAGGTTACGGTCATCAAGAAGGGGGAGACG
GAGTGCTACGAGTGCAAGCCGAAGCAGACGCCCAAGGTCCACCCTATTTG
CACCATCCGCAGGTGCGAACGTCTACATGCGTTAAGGGGGGTGCGGAAAT
GAGACAAATGCAATGCGGGGCTGATAGGTCGACACGAATGGAGGTTCAGG
ATGCGTGGAAACTCGGGAGGTCATAAAGTGGACCGAACACCAAAGCAAAC
AATCAAGAAGAAAGGAGAGGGGCATGAGTGCAGTCGATCTGTTACTCTTT
GCTGACTCTGAGATGTTTACAAGGCGGTGTAGGGTTCCTACAGTAGCGAT
CCCTGGGTAGCGCCGGCGTACTCCCGGCAAATTCACGAGTATTATTCAAA
CTATTGAGAAGTGACTTGGAAATTAAGTGTGTGCCAGCCGAAAACACCGG
CACAATACCGGGCACCGGCACTGTTCGACCGTTATTTAAGAGGGACCTCT
ACCGTAGTGATATTCTGGTGATATTGTGGGATGGCGAGGCGGAGGGGGTT
GGTTGAACCTGTCTTGCTTGTTGGTGAGTAATACTGCTCCGCCCGTTCTC
TGCACAGTTCCAAGTTCCGTTCGGATTGTCCGCTTGGGAACGGTGTTTGT
CATGCAAGGCAGCCCTCCCCCCCGGCAGTCGAACCTGATGATTGATTGCC
ACAAGCATTTGAAACTATTCGTAAGAGCTGCCGTGCATCTTTTGGACAGT
CGTGTTTGATGATAGCAAGCATGCCTGCGGACGTGAATCGTTCTCTTGTT
TTTTTATCATGTGGTTGGTGTTGTCCATGCCATCAAACCACAGCAGCAGT
AGATATCCCCCATTTCGCGGCCTGAACCTTTGCATCGTCTGTGCATGTCG
CCTCCCTTGTTTCTGTCCCGATGCTCCTCCTTTTCCTGTAACTCTCAACG
ACTGCTGTAACATATACATTTTTTGTTGACGCGGTTGTGTCCATGCTCTC
GATATGGCCGGCCTTTTTTGTTTTTTTTTCAAGAGAGGCTTATTCTTTGT
TTCTTTGTACCATTTGCACTGCAGCACTCCTTCGAAGCCCGTCCATTGCA
TCGTCTGGGCCAAGCAGCTATTCATACTCATGTTTGGCAAGGCGGAGGAA
TCCATGCTCTACGAAGATCCCGTCACCGGACAATCGGCCTTCATGGAACA
GGTTTGTACATAAGGGACAGACAGCAGCAACTCGTTTGTTAAATGCTGCT
GTTGCTCTCGTACGGTATTTTCCCATCATGATGCACTGCTGTTCTCCCCC
CCGTACACACTTCATGTCTCAATGTGCAGCGTGGTTAGTCACACAGCGAA
CGGATAAGGCACACTATATGTTTTTCTCCGTTTTTTGTTTGGGATTCTAC
ACGCTCTACGAAGATCCCGTCCTCGAACAATTAGTCCGGCACACATTCCC
CCTTCGAGCCTTAAAGCCGCTGTTGTGCATGTGCACTGTAGCAGCCAGAC
CACGGGGGGAGGGAGGGGGGGGTTTCTACAATTGTATACGGTCCGCGGAG
ACTCCCTCTACCGGGGGGGGCACACATTCCAGCCATCCAACTACCCCGTA
TTCCTTCCACTGCTACAGTATCCGCGGGGGCCCTTTGCCTCCCGAGAGAC
CCCTTCGACCCGGAGCTCAAAAATTTCCAGTCATCAAAATGAGTTCTACC
GTGGGTTTTTCCAACTGCTGTCTGCGGAGACCCTTTTACCGTCCGTGGAT
ACCACCTTGACAGCGGGTACATACATACGTCCAGTCATCCAACTGCTGTC
CCCGGGGACCCCTTGGCCGTCCGCGCAGAACCCCTTTTCCAGGAGCGCAA
AATTCCCAGCCTTCCAAACACGTACCGTTATTCCCTTCAGCTGCTGTCTG
TGGAGACCCTTCTACCGTCCGTCAAGTCGAGACACACGGCGGGCACGTAC
TAATACATGCGTCCAGCTATCCAACCGCTGTGCTGCGCGTACCACCTCGA
ATATCCTCGCCACGTTTTTTTTTGACTCTGTCGACGACTTGTTACCTTTG
TCGGCCGGGCAGTGGCCCAACCCCCTGAACCCCAACTCCAAATCCTTGAA
CGCTTTTGTTGTCTGGACGCTGGACCGGCCCCCGGTTTCTTCCTAACGCA
GGTGCTAGCTCGTCCTGAGGCTGTGGCGGAGGGAGAGGGGAAGGCTGCGA
AAGCGGTGGCGTCGGAGGAAGCGTTGGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6816:322..6899+

>mRNA_Ecto-sp13_S_contig6816.17758.1 ID=mRNA_Ecto-sp13_S_contig6816.17758.1|Name=mRNA_Ecto-sp13_S_contig6816.17758.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=711bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6816:322..6899+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGTACGGAGCTGTTTGACAAGGTGCAGAAGGCGAAGCTTCTCGTGGTTGG
AGCGGGGGGCATCGGTTGCGAGCTGCTGAAGAACCTGGTGCAGACCGGTT
TCCGGGACATCGAAGTGGTGGACTTGGATACGATCGACAAGTCCAACCTG
AACAGGCAGTTCCTCTTCCGACCGCACCACGTCGACAAGAGCAAGTCGTT
GATGGCGAGGGAGGCGGTGCTCAAATTCAACCCCGAGGCGAGGATCGTGG
CCCACCATGGCAACGTCAAGGAGGCCAAGTTCGGCATGGCCTTCATCAGA
AAGTTCGACCTCGTCCTGAATGCCCTCGACAACATTGATGCCCGAAGGCA
TGTGAACCGGCTTTGTCTGGCGGTAGAAAAGCCACTGATCGAGAGCGGAA
CTACTGGATACCTTGGCCAGGTTACGGTCATCAAGAAGGGGGAGACGGAG
TGCTACGAGTGCAAGCCGAAGCAGACGCCCAAGGTCCACCCTATTTGCAC
CATCCGCAGCACTCCTTCGAAGCCCGTCCATTGCATCGTCTGGGCCAAGC
AGCTATTCATACTCATGTTTGGCAAGGCGGAGGAATCCATGCTCTACGAA
GATCCCGTCACCGGACAATCGGCCTTCATGGAACAGGTGCTAGCTCGTCC
TGAGGCTGTGGCGGAGGGAGAGGGGAAGGCTGCGAAAGCGGTGGCGTCGG
AGGAAGCGTTG
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