prot_Ecto-sp13_S_contig6813.17756.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6813.17756.1
Unique Nameprot_Ecto-sp13_S_contig6813.17756.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length525
Homology
BLAST of mRNA_Ecto-sp13_S_contig6813.17756.1 vs. uniprot
Match: D8LD53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD53_ECTSI)

HSP 1 Score: 440 bits (1131), Expect = 3.040e-149
Identity = 266/288 (92.36%), Postives = 268/288 (93.06%), Query Frame = 0
Query:  237 GNGGPSDEGVVWVQCDTCKKWRRLPDFVDPDQLPLKWHCEMNIYDAARANCRAKQESSTATLLEAERKVRQXXXXXXXXXXXXXXXXXXXXXXXESRAKDANLRRFLSGWARRIKCAEKAKSKLAPSMSTRGKRKAPSQAQWVRCQNCGKWRALLRCMDASLFLGHGQQFYCLMNTWNESLASCSAPQENQYTVDALFPPPEPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGRSSSMYDHGEYNYEFSPGIRHDASSRAGGRXXXXGAEREGWYHRDEYY 524
            GNGGPSDEGVVWVQCDTCKKWRRLPDFVDPDQLPLKWHCEMNIYDAARANCRAKQESSTATLLEAERKVRQXXXXXXXXXXXXXXXXXXXXXXXESRAKDANLRRFLSGWARRIKCAEKAKSKLAPSMSTRGKRKAPSQAQWVRCQNCGKWRALLRCMDASLFLGHGQQFYCLMNTWNESLASCSAPQENQYTVDALFPPPEPARXXXXXXXXXXXXXXXXXX              G GR SSMYD+GEYNYEFSPG+RH ASSRAGG XXXX AEREGWYH DEYY
Sbjct:   57 GNGGPSDEGVVWVQCDTCKKWRRLPDFVDPDQLPLKWHCEMNIYDAARANCRAKQESSTATLLEAERKVRQXXXXXXXXXXXXXXXXXXXXXXXESRAKDANLRRFLSGWARRIKCAEKAKSKLAPSMSTRGKRKAPSQAQWVRCQNCGKWRALLRCMDASLFLGHGQQFYCLMNTWNESLASCSAPQENQYTVDALFPPPEPARXXXXXXXXXXXXXXXXXXGMNRRDGGDSDYEGG-GRPSSMYDYGEYNYEFSPGMRHGASSRAGGXXXXXXAEREGWYHGDEYY 343          
BLAST of mRNA_Ecto-sp13_S_contig6813.17756.1 vs. uniprot
Match: A0A6H5K0G2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0G2_9PHAE)

HSP 1 Score: 390 bits (1003), Expect = 4.390e-128
Identity = 270/274 (98.54%), Postives = 271/274 (98.91%), Query Frame = 0
Query:  165 ASVSIGVGRQRRSTAGMSWRHALDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNGGPSDEGVVWVQCDTCKKWRRLPDFVDPDQLPLKWHCEMNIYDAARANCRAKQESSTATLLEAERKVRQXXXXXXXXXXXXXXXXXXXXXXXESRAKDANLRRFLSGWARRIKCAEKAKSKLAPSMSTRGKRKAPSQAQWVRCQNCGKWRALLRCMDASLFLGHGQQFYCLMNTWNESLASCSAPQENQYTVDALFPPPE 438
            ASVSIGVGRQRRSTAGMSWRHALDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GNGGPSDEGVVWVQCDTCKKWRRLPDFVDPDQLPLKWHCEMNIYD ARANCRAKQESSTATLLEAERKVRQXXXXXXXXXXXXXXXXXXXXXXXESRAKDANLRRFLSGWARRIKCAEKAKSKLAPSMSTRGKRKAPSQAQWVRCQNCGKWRALLRCMDASLFLGHGQQFYCLMNTWNESLASCSAPQENQYTV+ALFPPPE
Sbjct:  173 ASVSIGVGRQRRSTAGMSWRHALDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GNGGPSDEGVVWVQCDTCKKWRRLPDFVDPDQLPLKWHCEMNIYDVARANCRAKQESSTATLLEAERKVRQXXXXXXXXXXXXXXXXXXXXXXXESRAKDANLRRFLSGWARRIKCAEKAKSKLAPSMSTRGKRKAPSQAQWVRCQNCGKWRALLRCMDASLFLGHGQQFYCLMNTWNESLASCSAPQENQYTVEALFPPPE 444          
BLAST of mRNA_Ecto-sp13_S_contig6813.17756.1 vs. uniprot
Match: A0A7S2MP46_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MP46_9STRA)

HSP 1 Score: 129 bits (325), Expect = 7.420e-31
Identity = 77/191 (40.31%), Postives = 102/191 (53.40%), Query Frame = 0
Query:  246 VVWVQCDTCKKWRRLPDFVDPDQLPLKWHCEMNIYDAARANCRAKQES-STATLLEAERKVRQXXXXXXXXXXXXXXXXXXXXXXXESRAKDANLRRFLSGWARRIKCAEKAKSKLAPSMSTRGKRKAPSQA-----QWVRCQN--CGKWRALLRCMDASLFLGHGQ--QFYCLMNTWNESLASCSAPQEN 426
             +WV+CD C+KWRRL   VD  +LP KW+C MN  D  RA C A +E   TA   E+                                A D   R+ L  W RR++C E  +S+L P+M TRGKR+  +       +WV+C N  CGKWRALLR MDAS  +   +  ++YC++NTW+E  ASC+APQEN
Sbjct:   54 AIWVECDKCQKWRRLRGVVDTKKLPSKWYCSMNKNDPERAKCSAPEEEYETANTPES--------------------------------AMDQRTRKHLRLWVRRLQCNETYESRL-PTM-TRGKRRNTASGSKEPYEWVKCCNPSCGKWRALLRFMDASSVIESAKNGEWYCVLNTWDEKAASCAAPQEN 210          
BLAST of mRNA_Ecto-sp13_S_contig6813.17756.1 vs. uniprot
Match: A0A7S2B7X4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B7X4_9STRA)

HSP 1 Score: 127 bits (319), Expect = 9.280e-31
Identity = 71/190 (37.37%), Postives = 94/190 (49.47%), Query Frame = 0
Query:  249 VQCDTCKKWRRLPDFVDPDQLPLKWHCEMNIYDAARANCRAKQESSTATLLEAERKVRQXXXXXXXXXXXXXXXXXXXXXXXESRAKDANLRRFLSGWARRIKCAEKAKSKLAPSMSTRGKRKAPSQAQWVRC--QNCGKWRALLRCMDASLFLGHGQQFYCLMNTWNESLASCSAPQENQYTVDALFPP 436
            VQCD C KWRRL    D D+LP KW+C MN  D AR NC A +E  T                                     +  D  L+  L  W RR++C + A+ +L  S STRGK++   + ++++C   NCGKWRAL R +D+         +YC+MNTW+E+LASCSAPQE     D    P
Sbjct:    1 VQCDKCTKWRRLHGVADADKLPKKWYCTMN-NDPARNNCNAPEEEET------------------------------------EKDPDERLKAHLRLWVRRLQCQDTAEVRLPTSSSTRGKKRPLHEQEYIQCCDPNCGKWRALHRSLDSKTLAERAGAWYCVMNTWDEALASCSAPQELPIGYDRATSP 153          
BLAST of mRNA_Ecto-sp13_S_contig6813.17756.1 vs. uniprot
Match: A0A7S3GQ09_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GQ09_9STRA)

HSP 1 Score: 125 bits (315), Expect = 3.720e-29
Identity = 72/197 (36.55%), Postives = 102/197 (51.78%), Query Frame = 0
Query:  237 GNGGPSDEGVVWVQCDTCKKWRRLPDFVDPDQLPLKWHCEMNIYDAARANCRAKQESSTATLLEAERKVRQXXXXXXXXXXXXXXXXXXXXXXXESRAKDANLRRFLSGWARRIKCAEKAKSKLAPSMSTRGKRKAPSQAQWVRCQN--CGKWRA---------LLRCMDASLFLGHGQQFYCLMNTWNESLASCSA 422
            G  G +    VWVQC+TC KWR LP  VDPD+LP  W C++NIYD  R NC A +ES     L  E +  Q                               L+ F+  WA+R+KCA++A+++L+ +  TRGK K    A+W++C +  CGKWRA         LL+ ++   F G    +YC MN+W+E+  SC+A
Sbjct:  104 GKSGDAPPERVWVQCNTCDKWRSLPSTVDPDKLPDIWTCDLNIYDNTRNNCNAPEESYK---LPQEEQHEQ-------------------------------LKAFVKVWAKRLKCADRAETRLSNAALTRGK-KRKVDAEWIKCSSPACGKWRAIPRTIETATLLKRLNKGRFFGGDGVWYCSMNSWDETTGSCAA 265          
BLAST of mRNA_Ecto-sp13_S_contig6813.17756.1 vs. uniprot
Match: A0A7S3DU87_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DU87_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.860e-28
Identity = 81/207 (39.13%), Postives = 106/207 (51.21%), Query Frame = 0
Query:  247 VWVQCDTCKKWRRLPDFVDPDQLPLKWHCEMNIYDAARANCRAKQES-STATLLEAERKVRQXXXXXXXXXXXXXXXXXXXXXXXESRAKDANLRRFLSGWARRIKCAEKAKSKLAPSMSTRGKRKAPSQA----QWVRCQN--CGKWRALLRCMDASLFL---------GHGQQFYCLMNTWNESLASCSAPQENQYTVDALFPPP 437
             WV+CD CKKWRRL   VD  +LP KW+C MN  D  RA C A +E   T    E+                                A DA  R+ L  W RR++C E  +S+  P++ TRGK++A        +WVRC N  CGKWRA+LRCM+A   +            Q++YC+MNTW+E +ASC+APQEN   + AL  PP
Sbjct:  388 TWVECDKCKKWRRLRGVVDEKKLPPKWYCSMNRNDPERARCSAPEEDYETQQTPES--------------------------------AADAKTRKHLRVWVRRLQCQEAYESRQ-PTL-TRGKKRAAGTMKDPYEWVRCCNPSCGKWRAVLRCMEAKTAVLDRKNPHSCAREQEWYCVMNTWDEKMASCAAPQEN---LPALGCPP 557          
BLAST of mRNA_Ecto-sp13_S_contig6813.17756.1 vs. uniprot
Match: A0A448ZKH0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKH0_9STRA)

HSP 1 Score: 129 bits (325), Expect = 4.650e-28
Identity = 78/190 (41.05%), Postives = 106/190 (55.79%), Query Frame = 0
Query:  247 VWVQCDTCKKWRRLPDFVDPDQLPLKWHCEMNIYDAARANCRAKQESSTATLLEAERKVRQXXXXXXXXXXXXXXXXXXXXXXXESRAKDANLRRFLSGWARRIKCAEKAKSKLAPSMSTRGKRKAPSQA-----QWVRCQN--CGKWRALLRCMDAS---LFLGHGQQFYCLMNTWNESLASCSAPQEN 426
             WV+CD CKKWRRL   VD ++LP KW+C MN  D  RA C A +E       E+ R                           ES+A DA  R+ L  W RR++C E+ +S+L P++ TRGK+++   +     +W+RC N  CGKWRA+LR MDA    + L    ++YC+MNTW+E  ASC+APQEN
Sbjct:  705 TWVECDKCKKWRRLRGIVDSNKLPPKWYCTMNKNDPERARCSAPEEE-----YESPRT-------------------------PESKA-DARTRKHLRVWVRRLQCNEQYESRL-PTL-TRGKKRSAGTSPKEPHEWIRCCNPSCGKWRAILRIMDAKQNVMDLTTDGEWYCVMNTWDEKTASCAAPQEN 861          
BLAST of mRNA_Ecto-sp13_S_contig6813.17756.1 vs. uniprot
Match: A0A7S2SHF1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SHF1_9STRA)

HSP 1 Score: 122 bits (306), Expect = 6.160e-28
Identity = 67/185 (36.22%), Postives = 91/185 (49.19%), Query Frame = 0
Query:  243 DEGVVWVQCDTCKKWRRLPDFVDPDQLPLKWHCEMNIYDAARANCRAKQESSTATLLEAERKVRQXXXXXXXXXXXXXXXXXXXXXXXESRAKDANLRRFLSGWARRIKCAEKAKSKLAPSMSTRGKRKAPSQAQWVRC--QNCGKWRALLRCMDASLFLGHGQQFYCLMNTWNESLASCSAPQE 425
            D+   WVQCD C +WRRL    D   LP +W C MN+ D    +C   +E  T                                        +  LR  L  W RRIK  E A+++L  S +TRGK++  S+ +W++C   NCGKWRAL R MD +  L     +YC+MN+W+E+LASC+APQE
Sbjct:   84 DKSQDWVQCDKCAQWRRLSKLTDLKTLPKRWFCSMNL-DPKYNSCSVPEEEDTED-------------------------------------PEQRLRTHLRLWVRRIKAGEDAETRLPTSHATRGKKRPLSEQEWIQCCDPNCGKWRALHRSMDVNSLLEKHTAWYCVMNSWDEALASCAAPQE 230          
BLAST of mRNA_Ecto-sp13_S_contig6813.17756.1 vs. uniprot
Match: A0A7S4MKU7_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MKU7_9STRA)

HSP 1 Score: 127 bits (320), Expect = 6.190e-28
Identity = 77/191 (40.31%), Postives = 102/191 (53.40%), Query Frame = 0
Query:  246 VVWVQCDTCKKWRRLPDFVDPDQLPLKWHCEMNIYDAARANCRAKQES-STATLLEAERKVRQXXXXXXXXXXXXXXXXXXXXXXXESRAKDANLRRFLSGWARRIKCAEKAKSKLAPSMSTRGKRKAPSQA-----QWVRCQN--CGKWRALLRCMDASLFLGHGQ--QFYCLMNTWNESLASCSAPQEN 426
              WV+CD CKKWRRL   VD  +LP KW+C MN  D  RA C A +E   T T  E+                                A D   R+ L  W RR++C E  +S+L P+M TRGKR++ + +     +WVRC N  CGKWRALLR MDA   +   +  ++YC++NTW+E  ASC+APQE+
Sbjct:  368 ATWVECDKCKKWRRLRGVVDAKKLPSKWYCHMNKNDPDRAKCSAPEEEYETPTTPES--------------------------------ASDQRTRKHLRLWVRRLQCNEAYESRL-PTM-TRGKRRSATTSAKEPYEWVRCCNPSCGKWRALLRFMDAQTVVESCKNGEWYCVLNTWDEKAASCAAPQES 524          
BLAST of mRNA_Ecto-sp13_S_contig6813.17756.1 vs. uniprot
Match: A0A7S1YBM6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YBM6_9STRA)

HSP 1 Score: 126 bits (316), Expect = 8.530e-28
Identity = 78/197 (39.59%), Postives = 102/197 (51.78%), Query Frame = 0
Query:  247 VWVQCDTCKKWRRLPDFVDPDQLPLKWHCEMNIYDAARANCRAKQES-STATLLEAERKVRQXXXXXXXXXXXXXXXXXXXXXXXESRAKDANLRRFLSGWARRIKCAEKAKSKLAPSMSTRGKRKAPSQA-----QWVRCQN--CGKWRALLRCMDAS---LFLGHGQQFYCLMNTWNESLASCSAPQENQYTVDA 432
             WV+CD CKKWRRL   VD  +LP KW+C MN  D  RA C A +E   T    E+                                A DA  R+ L  W RR++  E  + +  P+M TRGK+++ +       +WVRC N  CGKWRALLR MDA    L      ++YC+MNTW+E +ASC+APQEN  +V+A
Sbjct:  280 TWVECDKCKKWRRLRGVVDEKKLPSKWYCSMNKNDPERARCSAPEEEYETPNTPES--------------------------------AADARTRKHLRVWVRRLESQETFEGRQ-PTM-TRGKKRSTATTSKDPYEWVRCCNPSCGKWRALLRFMDAKQHVLERARNGEWYCVMNTWDEKMASCAAPQENLPSVNA 442          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6813.17756.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD53_ECTSI3.040e-14992.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0G2_9PHAE4.390e-12898.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2MP46_9STRA7.420e-3140.31Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2B7X4_9STRA9.280e-3137.37Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3GQ09_9STRA3.720e-2936.55Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S3DU87_9STRA1.860e-2839.13Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A448ZKH0_9STRA4.650e-2841.05Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2SHF1_9STRA6.160e-2836.22Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4MKU7_9STRA6.190e-2840.31Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S1YBM6_9STRA8.530e-2839.59Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 187..207
NoneNo IPR availableCOILSCoilCoilcoord: 115..144
NoneNo IPR availableCOILSCoilCoilcoord: 298..331
NoneNo IPR availableGENE3D3.30.40.100coord: 233..297
e-value: 1.4E-17
score: 64.7
NoneNo IPR availableGENE3D3.30.40.100coord: 370..427
e-value: 5.9E-13
score: 50.2
NoneNo IPR availablePANTHERPTHR46245FAMILY NOT NAMEDcoord: 369..450
coord: 244..327
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..524
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
IPR011124Zinc finger, CW-typePFAMPF07496zf-CWcoord: 248..292
e-value: 4.2E-14
score: 52.3
coord: 377..425
e-value: 9.8E-12
score: 44.7
IPR011124Zinc finger, CW-typePROSITEPS51050ZF_CWcoord: 242..295
score: 13.571
IPR011124Zinc finger, CW-typePROSITEPS51050ZF_CWcoord: 372..428
score: 10.755

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6813contigEcto-sp13_S_contig6813:1643..7959 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6813.17756.1mRNA_Ecto-sp13_S_contig6813.17756.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6813 1643..7959 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6813.17756.1 ID=prot_Ecto-sp13_S_contig6813.17756.1|Name=mRNA_Ecto-sp13_S_contig6813.17756.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=525bp
SAKRSKKKKAAAAAAAAAAAAAAAAAATASSSSDDGSHSDDDSAGHGGSH
RKVSPSGRRKGGGGKNGGTGVKGPRKGVARRGCSGGGGGGVVSGSSGRQR
AVRTSDDEEDGGDGSDQEVVEVEEEEEEEEEEEEEEEDDEGEDAANSGKQ
GAAVAAAAAPAAPAASVSIGVGRQRRSTAGMSWRHALDDDDEEEEEAEEK
RRRRKQDGRGRRQEVRKRQQQQQDGGRGRQQQQKRRGNGGPSDEGVVWVQ
CDTCKKWRRLPDFVDPDQLPLKWHCEMNIYDAARANCRAKQESSTATLLE
AERKVRQQKRRQQQQQREEEEDDEEEESDEESRAKDANLRRFLSGWARRI
KCAEKAKSKLAPSMSTRGKRKAPSQAQWVRCQNCGKWRALLRCMDASLFL
GHGQQFYCLMNTWNESLASCSAPQENQYTVDALFPPPEPARSDSDHDEDD
GVAAAAAAGHGMNRRDGGDSDYEGEGRSSSMYDHGEYNYEFSPGIRHDAS
SRAGGRGGGRGAEREGWYHRDEYY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011124Znf_CW