prot_Ecto-sp13_S_contig6807.17750.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6807.17750.1
Unique Nameprot_Ecto-sp13_S_contig6807.17750.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length289
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6807.17750.1 vs. uniprot
Match: D7G085_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G085_ECTSI)

HSP 1 Score: 563 bits (1451), Expect = 1.270e-202
Identity = 280/288 (97.22%), Postives = 283/288 (98.26%), Query Frame = 0 
Query:    1 MMAAPEETLPLRASVNGDGPGNHDGHHGKKVALGATVAYLLVFALICFPAVVPLWHPTYYAELGAEQRGWTWLGANALWLALALLWTLLHLDNGPCVATACLLCSVLWFYLSLVLLSQACRGQLPLLAIADALVHLTMLVVCFRAAWVGVAKKSQKARSDGSSTWRRVLRKWALVSASATLFAAFLGCCSSSLPLIPPVSERESAPWEWNSAILFVMTLAVLWAAFLTRGGLVDETKRAACAWIALSFSGSFVLCSFSWQALGLDARSVATSVVLAAETAVLAVAAVV 288
            MMAAPEETLPLR SVNGDGPGNHDGHHGKK+ALGATVAYLLVFALICFPAVVPLWHPTYYAELGAEQRGWTWLGANALWLALALLWTLLHLDNGPCVATACLLCSVLWFYLSLVLLSQACRGQLPL+AIADALVHLTML+VCFRAAWVGVAKKSQKARSDGSSTWRRVLRKWALVSASATLFAAFLGCCSSSLPLIPPVSERESAPWEWNSAILF MTLAVLWAAFLTRGGLVDETKRAACAWIALSFSGSFVLCSFSWQALGLDARSV TSVVLA ETAVLA AAVV
Sbjct:    1 MMAAPEETLPLRVSVNGDGPGNHDGHHGKKLALGATVAYLLVFALICFPAVVPLWHPTYYAELGAEQRGWTWLGANALWLALALLWTLLHLDNGPCVATACLLCSVLWFYLSLVLLSQACRGQLPLMAIADALVHLTMLIVCFRAAWVGVAKKSQKARSDGSSTWRRVLRKWALVSASATLFAAFLGCCSSSLPLIPPVSERESAPWEWNSAILFAMTLAVLWAAFLTRGGLVDETKRAACAWIALSFSGSFVLCSFSWQALGLDARSVTTSVVLAVETAVLAAAAVV 288
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6807.17750.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G085_ECTSI1.270e-20297.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 53..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..197
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..116
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 263..267
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 288..288
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 229..239
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 117..127
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..95
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 240..262
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..52
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 152..171
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 268..287
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 128..151
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 209..228
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 198..208
NoneNo IPR availableTMHMMTMhelixcoord: 33..55
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
NoneNo IPR availableTMHMMTMhelixcoord: 174..196
NoneNo IPR availableTMHMMTMhelixcoord: 126..148
NoneNo IPR availableTMHMMTMhelixcoord: 70..89
NoneNo IPR availableTMHMMTMhelixcoord: 240..262
NoneNo IPR availableTMHMMTMhelixcoord: 211..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6807contigEcto-sp13_S_contig6807:4671..6376 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6807.17750.1mRNA_Ecto-sp13_S_contig6807.17750.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6807 3004..6376 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6807.17750.1 ID=prot_Ecto-sp13_S_contig6807.17750.1|Name=mRNA_Ecto-sp13_S_contig6807.17750.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=289bp
MMAAPEETLPLRASVNGDGPGNHDGHHGKKVALGATVAYLLVFALICFPA
VVPLWHPTYYAELGAEQRGWTWLGANALWLALALLWTLLHLDNGPCVATA
CLLCSVLWFYLSLVLLSQACRGQLPLLAIADALVHLTMLVVCFRAAWVGV
AKKSQKARSDGSSTWRRVLRKWALVSASATLFAAFLGCCSSSLPLIPPVS
ERESAPWEWNSAILFVMTLAVLWAAFLTRGGLVDETKRAACAWIALSFSG
SFVLCSFSWQALGLDARSVATSVVLAAETAVLAVAAVV*
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