mRNA_Ecto-sp13_S_contig6805.17747.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6805.17747.1
Unique NamemRNA_Ecto-sp13_S_contig6805.17747.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6805.17747.1 vs. uniprot
Match: A0A6H5JPI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPI8_9PHAE)

HSP 1 Score: 1069 bits (2764), Expect = 0.000e+0
Identity = 580/632 (91.77%), Postives = 599/632 (94.78%), Query Frame = 3
Query:  255 MTMIIPTSSDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPVVFRTQVVDVAHNLSDWIVMRNEEAIVEGGSLDHIRGTLVDGNATTTYRIGESIIRGNTVFASWSPQSSRIASGLFYDIDDGQAIVSEIACSTPSRTGSLYITAEESNKWGDVFECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVWMPGEVTPQEAQINHVFYVSSTTRLVEAIVSGXXXXXXXGGGCLDMLTKFSVQNATYSLNGALRVSPFGEHPRSSSVESLDQVEPIVAGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDRDQLIRAISLPSGEGADGKPVAIKIYVRQERDNPFSILISDDGVYRGCAGLKKRLLASMKSDSDVLENSVHSMSGSGVLPLGTRELTFEGVRSSTADSDRPHQHSEPDTHQRRSPVSVRTPDRXXXXXXXXXXXXXXXXXXXXXXXXXXTVVGLVASPVQGGRVGSTPHRQLALTLEDLEGSSSTTVGTTVEDRSLVASEVRKGERTASSMRARKSVGQDDVEAAAPAAV 2150
            MTMIIPTSSDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPP+VFRTQVVDVAHN SDWIV+RNEEAIVEGGSLDHIRGTLVDGNATTTYRIGESIIRGNTVFASWSPQSSRIASGLFYDID+GQAIVSEIACSTPSRTGSLYITAEES+KWGDV ECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVW+PGEV PQEAQ+NH FYVSSTTRLVEAIVSGXXXXXXXGGGCLDMLTKFSVQNATYSLNGALRVSPFGEHP SSSVE LDQVEPIV GVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDRDQLIRAISLPSGEGADGKPVA+KIYVRQER+N FSI+ISDDGVYRGCAGLKKRLLASMKSDS VLENS HSMSGSGVLP+GTRELTFEGVRSSTADSDRPHQ +EPDTHQRRSPV+V TP RXXXXXXXXXXXXXXXX          T+VGLVASPVQG  VG+TP RQ+ALTLE+L  S S+ VGTTVED SLVASEV  GERTAS+MRARKSVGQ+DVEAAAPAAV
Sbjct:    1 MTMIIPTSSDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPIVFRTQVVDVAHNFSDWIVIRNEEAIVEGGSLDHIRGTLVDGNATTTYRIGESIIRGNTVFASWSPQSSRIASGLFYDIDNGQAIVSEIACSTPSRTGSLYITAEESSKWGDVSECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVWVPGEVKPQEAQLNHAFYVSSTTRLVEAIVSGXXXXXXXGGGCLDMLTKFSVQNATYSLNGALRVSPFGEHPSSSSVERLDQVEPIVVGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDRDQLIRAISLPSGEGADGKPVALKIYVRQERNNGFSIIISDDGVYRGCAGLKKRLLASMKSDSGVLENSAHSMSGSGVLPVGTRELTFEGVRSSTADSDRPHQRAEPDTHQRRSPVTVPTPARXXXXXXXXXXXXXXXXRL--------TLVGLVASPVQGASVGATPRRQMALTLENLGDSLSSMVGTTVEDHSLVASEVPNGERTASTMRARKSVGQEDVEAAAPAAV 624          
BLAST of mRNA_Ecto-sp13_S_contig6805.17747.1 vs. uniprot
Match: D7FV77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV77_ECTSI)

HSP 1 Score: 472 bits (1214), Expect = 1.000e-154
Identity = 281/311 (90.35%), Postives = 292/311 (93.89%), Query Frame = 3
Query: 1215 MLTKFSVQNATYSLNGALRVSPFGEHPRSSSVESLDQVEPIVAGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDRDQLIRAISLPSGEGADGKPVAIKIYVRQERDNPFSILISDDGVYRGCAGLKKRLLASMKSDSDVLENSVHSMSGSGVLPLGTRELTFEGVRSSTADSDRPHQHSEPDTHQRRSPVSVRTPDRXXXXXXXXXXXXXXXXXXXXXXXXXXTVVGLVASPVQGGRVGSTPHRQLALTLEDLEGSSSTTVGTTVEDRSLVASEVRKGERTASSMRARKSVGQDDVEAAAPAA 2147
            MLTKFSVQNATYSLNGALRVSPFGEHPRSSSVESLDQVEPIVAGVLVS+MGTVCG MLMVVTGAAFAGCLC HSRKALDVYDRDQLIRAISLPSGEGADGKP AIKIYVRQE+DN FSI+ISDDGVYRGCAGLKKRLLASMKSDSDVLENSVHSMSGSGVLPLGTRELTF+GVRSSTADSD PHQH+EPDTHQRRSPV V     XXXXXXXXXXXXXXXXXXXXXXXX  TVVGLVASPV+G  VG+TP RQLALTLEDLEGSSSTTVGTTVEDRSLVASEV +G+RTASS RARKS+G+DDVEA APAA
Sbjct:    1 MLTKFSVQNATYSLNGALRVSPFGEHPRSSSVESLDQVEPIVAGVLVSNMGTVCGAMLMVVTGAAFAGCLCCHSRKALDVYDRDQLIRAISLPSGEGADGKPAAIKIYVRQEQDNAFSIVISDDGVYRGCAGLKKRLLASMKSDSDVLENSVHSMSGSGVLPLGTRELTFDGVRSSTADSDGPHQHAEPDTHQRRSPVPV----PXXXXXXXXXXXXXXXXXXXXXXXXRTTVVGLVASPVRGASVGATPRRQLALTLEDLEGSSSTTVGTTVEDRSLVASEVPRGDRTASSTRARKSIGRDDVEAPAPAA 307          
BLAST of mRNA_Ecto-sp13_S_contig6805.17747.1 vs. uniprot
Match: D7FRU1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRU1_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 3.010e-69
Identity = 160/441 (36.28%), Postives = 233/441 (52.83%), Query Frame = 3
Query:  318 LLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPVVFRTQVVDVAHNLSDWIVMRNEEAIVEGGS----LDHIRGTLVDGNATTTYRI------------GESIIRGNTVFASWSPQSSRIASGLFYDIDDGQAIVSEIACSTPS-RTGSLYITAEESNKWGDVFECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVWMPGEVTPQEAQINHVFYVSSTTRLVEAIVSGXXXXXXXGGGCLDMLTKFSVQNATYSLNGALRVSPFGEHPRSSSVESLDQVEPIVAGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDRDQLIRAISLPSGEGAD--GKPVAIKIYVRQERDNPFSILISD 1583
            LL+  LHP + W FHR+RA  AW+ I+K++ VEVT YN+ +E  G RG WD AR + ++LA F +++WGLELS+DLA   +G  DLLNRPPPV  R +  D   N   W V+   +   +       L+H+   + D +A + Y I             ++ I G  + ASW  + S     LFYDI+   A V  + CS  + +   +Y+  +    WG+  +CE GP     + +    P V+L N   G   +IVEE SSYP+FLYSVW          ++ ++F+V ST RLVEA+++G       GG C  +L  FS     Y  +G  R SPFGE P   +V   D +E I AGV ++    VC + +M  T       +C  +   +DVYDRD+L+RA+SL      D   +  AI+I+VR+E     ++ I+D
Sbjct:   33 LLAYFLHPAIEWAFHRLRAYRAWRCIQKRQAVEVTSYNLMAEVFGGRGSWDSARNIAVILAVFSLASWGLELSMDLA-SLEGEADLLNRPPPVFLRPETNDT--NTDPWQVLTLSDIDPDYNGNWRGLEHLN--VEDTHANSRYYIVKDTRDYLGKTAKDTFINGEILVASWDDKPS-----LFYDING--ANVDSLECSGETLKDAEVYLGTD---LWGNALDCERGPRPTGLTTSP---PAVVLTNGDSGLVSVIVEESSSYPTFLYSVWTAEG--SDSVELAYLFHVHSTVRLVEAVITGIVHGETEGGACFGLLRVFSETRVEYE-DGLDRASPFGEIPTGDTVLVQD-LETIEAGVEINMNALVCLLWVMASTAVCVVWLICLRNSIGMDVYDRDELLRAVSLQGHASRDPAAEHPAIRIFVRREDSGHITVFIND 451          
BLAST of mRNA_Ecto-sp13_S_contig6805.17747.1 vs. uniprot
Match: D8LC87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC87_ECTSI)

HSP 1 Score: 241 bits (615), Expect = 5.000e-63
Identity = 176/513 (34.31%), Postives = 252/513 (49.12%), Query Frame = 3
Query:  267 IPTSSDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPVVFRTQVVDVAHNLSDWIVMRNEEAIVEGGSLDHIRGTLVDGNATTTYRIG-----------ESIIRGNTVFASWSPQSSRIASGLFYDIDDGQAIVSEIACSTPSRTGSLYITAEESNKWGDVFECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVWMPGEVTPQEAQINHVFYVSSTTRLVEAIVSGXXXXXXXGGGCLDMLTKFSV-----QNATYSLNGALRVSPFGEHPRSSSVESLDQVEPIVAGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDRDQLIRAISLPSGEGADGKPVA---IKIYVRQERDNPFSILIS-DDGVYRGCAG-LKKRLLASMKSDSDVLENSVHSMS--GSGVLPLGTRELTFEGVR 1736
            +PT      F+I L  + L+  LHP +   + ++RA  AW+++EK + V+VT Y + SE    RG+WD AR VT+LLAAF + +W LELSL++    +G   LLN P P+    Q      +L+ W VM  EE   E G        + +  A +TY +            E+ + G  V ASW P     A GL+Y   +  A V  I C      G +Y+  E +  WG    C  GP     + N  +S PVI+L  +EGE  +IVEE  ++PSFLYSVW  G    +E  + + F++SST RL EA+V+G       GG C  +L  F+      +  +       R  PFGE P    V+SL  VE I  GVL++    V  V L+V++       +C  S   +DVYDRD+L+RAIS    +G D  P     ++IYV++ER    +++IS  D    GCA  L +R          V +   H++   G   LPLG   +    VR
Sbjct:   18 LPTQEPT--FAIGLSFVFLAYFLHPRIEATYQKVRAARAWRAVEKHKRVDVTTYPMVSEVFRGRGKWDAARAVTLLLAAFSLGSWVLELSLEID-HVEGGARLLNLPVPIYLVNQT-----SLA-WQVMPLEEINPEYGRAWRDLDNMEEKQAKSTYFVTGYREHAWSKKIETHVDGEIVVASWDPDDKHRA-GLYYG-SNHTATVDSITCK--GTGGDVYLYDEAA--WGSFLWCGEGP----LAENKTSSQPVIILEKSEGEVSVIVEEVGTHPSFLYSVWTAGSADSKE--LAYSFHISSTVRLAEAVVTGIVNGETGGGPCFGLLRTFNAGRDMEEGISTGEEERERAKPFGEKPEDDKVDSLQDVETIEVGVLMNTNALVAFVCLLVLSLVGIGWSMCLESSVEMDVYDRDELLRAIS-QQAQGEDNDPSTRSDMRIYVQKERGGELNVVISASDDDQNGCARFLLRREPTPTVHPIPVADAVSHALDDHGGAPLPLGRPRMFIGSVR 508          
BLAST of mRNA_Ecto-sp13_S_contig6805.17747.1 vs. uniprot
Match: D7FRT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT6_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 1.060e-58
Identity = 167/523 (31.93%), Postives = 255/523 (48.76%), Query Frame = 3
Query:  297 SIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPVVFRTQVVDVAHNLSDWIVMRNEEAIVEGGSLDHIRGTLVD------GNATTTYRIG-----------ESIIRGNTVFASWSPQSSRIASGLF--------YDIDDGQAIVSEIACST---PSRTGSLYITAE-ESNKWGDVFECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVWMPGEVTPQEAQINHVFYVSSTTRLVEAIVSGXXXXXXXGGGCLDMLTKFSVQNATYSLNGA---LRVSPFGEHPRSSSVESLDQVEPIVAGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDRDQLIRAISLPS-GEGAD--GKPVAIKIYVRQERDNPFSILISDDGV--------YRGCAGLKKRLLASMKSDSDVLENSVHSMSGSGVLPLGTRELTFEGVR 1736
            +I L  + L+  LHP+V W +HR+RA  AW++IEK R VEVT Y+   E L  RG WD  R+VT+LL  F+V++WGLEL LD     +     L +P PV  +    D+ +N + W V+  +E  + G   D+  G+ +D        A + Y +            E  I G  + A+W P  +   S  F        Y+     A+V  + CS+   P +   +Y     +S +WG V ECE+GP L N    ++A P +IL  +   E ++I+EE +++ SFLYSVW   +       + + F+++ST RL EA+V+G       GGGC  ML  FS          A   ++  PFGE+P+S  VE L  VE I AG+ ++     C V ++ +T       +       +D+YDRD+LIRA+SL   G   D   +   ++I+VR+E +   S+ ISD G         +  C  + +    S  +D+ +  N      G    P G+R +   GVR
Sbjct:   36 AIGLSFIGLAYFLHPLVVWAYHRVRAYRAWRAIEKGRAVEVTAYSNREEILRGRGVWDATRIVTVLLVVFNVASWGLELMLD-QYSHENEACPLTQPSPVYRK----DLDNN-ARWQVLNLDE--INGEDRDY-NGSWLDLPNVSKTEAKSLYYVENFKRSAWSDPVEKDISGEIIVANWDPAIAESLSFSFGESISSGSYEEGTATAVVEAVNCSSSSDPLKDAPVYRKMNNKSEEWGRVVECEAGPRLANG--GEQAQPAIILTQNGTNETHVIIEETTTFLSFLYSVW---KTNGDSVTLTYAFHIASTVRLAEAVVTGIVLGESSGGGCFGMLRAFSRGPEPPEDEYAKMMVKALPFGENPQSGKVEKLTDVETIEAGIDINVAAMTCLVCVLSLTVVGIVWAVYLGRSTGMDIYDRDELIRAVSLQGHGRAVDLAAQHSRMRIFVRREDNGGISVAISDTGQAEPGGCWRFWPCKKVGETADPSPVADTVIQNNDDF---GGASAPAGSRTVWLGGVR 541          
BLAST of mRNA_Ecto-sp13_S_contig6805.17747.1 vs. uniprot
Match: A0A6H5JST2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JST2_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 2.830e-58
Identity = 167/517 (32.30%), Postives = 259/517 (50.10%), Query Frame = 3
Query:  297 SIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPVVFRTQVVDVAHNLSDWIVMRNEEAIVEGGS---LDHIRGT------LVDGNATTTYRIG-ESIIRGNTVFASWSPQSSRIASGLF--------YDIDDGQAIVSEIACSTPSRTGSLYITAEESNK---WGDVFECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVWMPGEVTPQEAQINHVFYVSSTTRLVEAIVSGXXXXXXXGGGCLDMLTKFSV-QNATYSLNGAL-RVSPFGEHPRSSSVESLDQVEPIVAGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDR-----DQLIRAISLPSGEGADGKPVA----IKIYVRQERDNPFSILISDDGVYR--GCAGLKK-RLLASMKSDSDVLENSVHSMSGSG--VLPLGTRELTFEGVR 1736
            +I+L  ++L+ VLHP+V   +HR+RA  AW++IE  R VEVT Y+   E L  RG WD  R+VT+LL  F+V++W LEL LDL    +     L +PPPV       + +  + +   +  E+   +G S   L ++  T       V+    + +  G E  I G+ + A+W P  +   +  F        Y+     A+V  + CS+  R     +  + +NK   WG V ECE GP L N S  ++A P +IL      E ++I+EE +++ SFLYSVW   +   +   +++ F+++ST RL EA+V+G       GGGC  ML  FS   N      G + +  PFGE+P+S  V+ L  VE I AG+ ++     C V ++ +T       +       +D+YDR     D+LIRA+SL  G+  +  P A    I+I+VR+E +   S+ ISD G     GC      + +A     S V +  + +  G G   +P G+R +   GVR
Sbjct:   36 AISLSFIVLAYVLHPLVIQAYHRVRAYRAWRAIENGRVVEVTAYSDREEILRGRGVWDATRIVTVLLVVFNVASWVLELMLDL-YSFENEAYPLTQPPPVYRENIQGNASWQVLNLDEINGEDRKYDGSSWFDLPNVSETEAKSLYYVENFKRSAWSDGVEKDISGDIIVANWDPAIAGSLNFFFGENILSRSYEEKTATAVVEAVDCSSSGRLKDAPVYRKINNKSEEWGRVVECEVGPRLPNGS--EQAQPAIILTQHGTNETHVIIEETTTFLSFLYSVW---KTNGESVNLSYAFHIASTVRLAEAVVTGIVLGESTGGGCFGMLRAFSRGPNPPEDEYGEMIKALPFGENPQSGKVQKLTDVETIEAGIDINVAAMSCLVCVLSLTVVGVVWAVYLGRSTGMDIYDRWGTAWDELIRAVSL-QGQRRELDPAAEHSKIRIFVRREDNGSISVAISDTGQAEPGGCWRFWPCKKVAETADPSPVADTVIQNNDGFGGASVPAGSRTVWLGGVR 545          
BLAST of mRNA_Ecto-sp13_S_contig6805.17747.1 vs. uniprot
Match: D7FRU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU0_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 3.690e-52
Identity = 142/426 (33.33%), Postives = 215/426 (50.47%), Query Frame = 3
Query:  258 TMIIPTSSDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPVVFRTQVVDVAHNLSDWIVMRNEEAIVE----GGSLDHIRGTLVDGN---ATTTY----RIGESIIRGNTVFASWSPQSSRIASGLFYDIDDGQAIVSEIACSTPSRTGSLYITAEESN----KWGDVFECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVWMP--GEVTP---QEAQINHVFYVSSTTRLVEAIVSGXXXXXXXGGG--CLDMLTKFSVQNAT--YSLNGALRVSPFGEHPRSSSVESLDQVEPIVAGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDR 1463
            T  +PT   +   +I L  + L+ +LHP +   + R+RA  AW+ IEKQ+ V+VT Y + SE    RGRWD ARV+T+LL AF +++W LELS+DL    D P  LL +PPPV F+    +    +  W V+   E   E       L ++  T           TY    +  +  I G  + ASWSP+       L Y       +V  I CS+        +T   +     +WG V EC+ GP + N +   ++ P +IL     G+ ++IVEE S +PSFLYSVW      +T       +I + F+++ST RL EA+V+G       GGG  C  +L  +S  + T  +   G  + +PFGE P + +V+SL++VE I  GV+++    V  V L+V++   F       S+  +D+YDR
Sbjct:   12 TWTMPTGGVDSTLAIGLSFIFLAYILHPAIEAAYQRVRAYHAWRCIEKQQRVDVTTYLMLSELFAGRGRWDAARVITLLLLAFSLASWILELSMDLN-PVDNPAHLLTQPPPV-FKWDAENDNGEVP-WHVLNLTEIDSEYQGNWWKLPNVFETFAKSRYYVQNDTYYAWSKRKDRYIDGEIIVASWSPEEK--PDSLIYG-QSATVMVDGITCSSNGTRDDTTVTRRNATDHIEEWGTVLECDRGPGITNGTG--KSKPSIILTAHDGGDTHVIVEETSKHPSFLYSVWNATGDSITAAGDSSVEIAYAFHIASTVRLAEAVVTGIVNGVAGGGGGACFGLLRAYSKGSDTPEFEEYGTEKATPFGEDPENGAVDSLNEVEIINTGVMMNANAMVAFVWLLVLSFIGFGMTFFLRSKIDMDIYDR 429          
BLAST of mRNA_Ecto-sp13_S_contig6805.17747.1 vs. uniprot
Match: A0A6H5JMP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP8_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 6.820e-43
Identity = 148/485 (30.52%), Postives = 234/485 (48.25%), Query Frame = 3
Query:  267 IPTSSDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPVVFRTQVVDVAHNLSDWIVMRNEEAI--VEGGSLDHIRGTLVDGNATTTYRIGE-----------SIIRGNTVFASWSPQSSRIASGLFYDIDDGQAIVSEIACSTPSRTGS-----LYITAEESN---KWGDVFECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVW------MPGEVTPQEAQINHVFYVSSTTRLVEAIVSGXXXXXXX--GGGCLDMLTKFS---VQNATYS-LNGALRVSPFGEHPRSSSVESLDQVEPIVAGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDRDQLIRAISLPSGEGADGKPV---AIKIYV-RQERDNPFSILISD-DGVYRGCA 1607
            +PT + N    I L  + L+ V+HP  ++ + R+RA  AW+ IE+   V+VT Y  + E LG   R D ARVV +LL  F ++ W LELS+D       P      PPPV F+    +     + W V+   E     EG  L+  +  + +  A + Y + E             I G+ + A+WS  +      L Y  ++   +V  I CS+  +  +     + +T   +N   +WG V EC+ GP++V    N +  P +IL     G+ ++IVEE SS PSFLYSVW      +         +I + F++SST RL EA+V+          GG C  +L  ++        +S L G  +  PFGE P S  + SL  +E I+ GV ++  G V   +++ ++    A  L    +  +D+Y+RD+L+RA +L + +G    P    A++I V R++R    +I IS+ D    GCA
Sbjct:   13 LPTGTMNTTLVIGLAYIFLAYVVHPTTKYAYLRVRAYRAWRRIEEGERVDVTDYPTWMELLGGCARRDTARVVALLLLLFALALWYLELSIDW-FPVSVPAYSQTLPPPV-FQWSAGNSTP--TPWHVLSLNEIAPEYEGDWLN--QPNVFETVAKSRYYVKEYKNYPWSEPKDRYINGDIIVANWSRNTK--PDNLVYG-ENATVMVDGITCSSGGKAQTFTDDPIPVTLNRTNGIEEWGTVLECDQGPAVVEVIGNSK--PSIILTERETGDTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGVAGDGGGACFGLLRAYNRGPYDTRDFSALYGKQKARPFGEDPVSHYIYSLKDIENIIIGVEMNTNGMVAFALVIGLSFIGIALTLFLCPKYEMDIYNRDELLRATNLQA-QGLPDDPSRHSAMRIEVQREDRSRHLTITISESDSERSGCA 485          
BLAST of mRNA_Ecto-sp13_S_contig6805.17747.1 vs. uniprot
Match: D7FRT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT9_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 1.000e-37
Identity = 144/474 (30.38%), Postives = 223/474 (47.05%), Query Frame = 3
Query:  267 IPTSSDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPVVFRTQVVDV----AHNLS--DWIVMRNEEAI--VEGGSLDHIRGTLVDGNATTTYRIGE-----------SIIRGNTVFASWSPQSSRIASGLFYDIDDGQAIVSEIACSTPSRTG---------SLYITAEESNKWGDVFECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVW------MPGEVTPQEAQINHVFYVSSTTRLVEAIVSGXXXXXXX--GGGCLDMLTKFS---VQNATYSLN-GALRVSPFGEHPRSSSVESLDQVEPIVAGVLVSDMGTVCGVMLMVVTGAAFAGC---LCFHSRKALDVYDRDQLIRAISLPSGEGADGKPV---AIKIYVRQE 1550
            +PT + N    I L  + L+ V+HP  ++ + R+RA  AW+ IE+   V+VT Y  + E LG+ GR D ARVV +LL  F +++W L+LS+D+      PV     P P   +T    V    A N +   W V+   E     EG  L+  +  + +  A + Y + E             I G+ + A+WS  +      L Y  +    +V  I CS+              +L    +    WG V EC+ GP+ ++   + +  P +IL     G+ ++IVEE SS PSFLYSVW      +         +I + F++SST RL EA+V+          GG C  +L  ++        +S + G  +  PFGE P S  + SL   E I+ GV   +M T   V   +V G +F G    L    +  +DVY+RD+L+RAI+L + +G    P    A++I V++E
Sbjct:   13 LPTGTMNTTLVIGLAYIFLAYVVHPATQYAYLRVRAYRAWRRIEEGERVDVTNYPTWMELLGNCGRRDTARVVALLLLLFALASWILDLSIDVF-----PV-----PNPAYSQTLAPQVFKWPASNSTGASWHVLSLTEIDQEYEGDWLN--QPNVFETVAKSRYYVKEYKNYVWSEPKDRYINGDIIVANWSRNTK--PDNLVYG-ERATVMVDGITCSSGGEADIFTDDPIPVTLKNGTDAIEVWGTVLECDQGPAGIDVIGSSK--PSIILTERETGDTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGVAGEGGGACFGLLRAYNRGPYDTVDFSDSYGKQKAMPFGEDPVSHYINSLKDNEHIIVGV---EMNTNGMVAFALVIGLSFTGIVLTLFLCPKYEMDVYNRDELLRAINLQA-QGLPDDPSRHSAMRIEVQRE 465          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6805.17747.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JPI8_9PHAE0.000e+091.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV77_ECTSI1.000e-15490.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRU1_ECTSI3.010e-6936.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LC87_ECTSI5.000e-6334.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRT6_ECTSI1.060e-5831.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JST2_9PHAE2.830e-5832.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRU0_ECTSI3.690e-5233.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMP8_9PHAE6.820e-4330.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRT9_ECTSI1.000e-3730.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6805contigEcto-sp13_S_contig6805:4590..7967 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size3378
Hectar predicted targeting categorysignal peptide
Exons1
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-14_000070.1
Cds size1899
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463935.4365718-UTR-Ecto-sp13_S_contig6805:4589..48431681463935.4365718-UTR-Ecto-sp13_S_contig6805:4589..4843Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6805 4590..4843 +
1681463935.5706098-UTR-Ecto-sp13_S_contig6805:6742..79671681463935.5706098-UTR-Ecto-sp13_S_contig6805:6742..7967Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6805 6743..7967 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463935.4651377-CDS-Ecto-sp13_S_contig6805:4843..67421681463935.4651377-CDS-Ecto-sp13_S_contig6805:4843..6742Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6805 4844..6742 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6805.17747.1prot_Ecto-sp13_S_contig6805.17747.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6805 4844..6742 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6805.17747.1

>prot_Ecto-sp13_S_contig6805.17747.1 ID=prot_Ecto-sp13_S_contig6805.17747.1|Name=mRNA_Ecto-sp13_S_contig6805.17747.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=633bp
MTMIIPTSSDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQ
RPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALR
TDGPVDLLNRPPPVVFRTQVVDVAHNLSDWIVMRNEEAIVEGGSLDHIRG
TLVDGNATTTYRIGESIIRGNTVFASWSPQSSRIASGLFYDIDDGQAIVS
EIACSTPSRTGSLYITAEESNKWGDVFECESGPSLVNASANDRASPPVIL
LNSTEGEAYLIVEEESSYPSFLYSVWMPGEVTPQEAQINHVFYVSSTTRL
VEAIVSGIANGIANGGGCLDMLTKFSVQNATYSLNGALRVSPFGEHPRSS
SVESLDQVEPIVAGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDV
YDRDQLIRAISLPSGEGADGKPVAIKIYVRQERDNPFSILISDDGVYRGC
AGLKKRLLASMKSDSDVLENSVHSMSGSGVLPLGTRELTFEGVRSSTADS
DRPHQHSEPDTHQRRSPVSVRTPDRTPARTPARTPARTPARTPARTPARR
PTVVGLVASPVQGGRVGSTPHRQLALTLEDLEGSSSTTVGTTVEDRSLVA
SEVRKGERTASSMRARKSVGQDDVEAAAPAAV*
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mRNA from alignment at Ecto-sp13_S_contig6805:4590..7967+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6805.17747.1 ID=mRNA_Ecto-sp13_S_contig6805.17747.1|Name=mRNA_Ecto-sp13_S_contig6805.17747.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3378bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6805:4590..7967+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGCCGAGCGTGTAACAAACGACAGGCAGCCAGGAAGGGGACGGGCGCGGC GAGGTACCTACCTACCTCCGATTACCTTCCCTTCTCGAGTCTTTGACGCT GCATAGCTATCTTCTTCTTTTGGGACTACGACTTTTGTACAGTGAATTGC CTGCGCGTGGGAGTGGAAGCACTTGTGCCAACATTAAGTGGGGCTGCACG TGCTTTGTGAGTAGGCGAGTGGAGTTGATCAACCTTGCGGTGTATGAATA GAAAATGACGATGATTATTCCGACGTCGTCGGATAACGTGGCCTTCAGCA TTGCGTTGGGTGTCTTGCTCTTGTCAGTTGTGCTACACCCGATCGTGCGG TGGTGCTTCCACAGAATAAGGGCCAATGTGGCGTGGAAATCCATCGAAAA GCAGCGACCTGTGGAAGTCACCAAGTACAACATATTTTCTGAAGCCTTGG GCGACCGCGGTAGGTGGGACATGGCACGAGTAGTAACGATCCTCCTGGCG GCGTTTCATGTGTCGACGTGGGGGCTAGAGCTGTCCCTTGATCTTGCCTT GAGGACCGACGGTCCGGTAGACCTTCTGAATCGCCCGCCGCCCGTAGTGT TCCGCACGCAGGTTGTCGACGTCGCGCACAATTTGTCAGATTGGATAGTG ATGCGCAACGAAGAAGCCATCGTTGAGGGGGGTTCTTTGGATCACATTCG CGGGACGTTAGTGGATGGAAACGCGACGACGACGTACCGTATCGGGGAAA GTATCATTCGAGGAAACACTGTGTTCGCATCGTGGTCTCCGCAGTCATCC CGCATCGCGTCGGGCCTTTTTTACGACATAGACGACGGCCAAGCTATTGT GTCAGAGATTGCTTGCTCTACGCCGTCTCGAACGGGCAGCCTGTATATTA CGGCCGAGGAGAGCAACAAGTGGGGTGACGTTTTCGAGTGCGAGAGTGGA CCAAGTTTGGTCAACGCTAGTGCAAACGATCGTGCAAGCCCGCCTGTGAT CCTCTTGAACAGTACCGAGGGCGAAGCTTACTTGATTGTCGAAGAAGAGA GCAGTTATCCGAGCTTTCTGTATTCGGTCTGGATGCCGGGAGAGGTCACA CCACAAGAAGCGCAAATAAACCATGTATTTTATGTTTCCAGCACCACACG CCTTGTGGAAGCGATCGTGTCGGGTATTGCGAACGGGATTGCGAATGGGG GCGGTTGCTTGGACATGCTCACCAAGTTCAGCGTGCAGAATGCGACATAT TCGTTGAACGGCGCTCTGCGGGTTTCTCCGTTTGGCGAGCACCCCCGCTC GTCTTCGGTGGAAAGCCTAGACCAGGTAGAGCCCATTGTTGCAGGTGTAC TGGTCAGCGACATGGGCACGGTGTGTGGGGTAATGCTTATGGTGGTGACT GGCGCGGCGTTTGCCGGGTGCTTGTGCTTTCACTCGCGCAAGGCTTTAGA CGTATACGATCGCGACCAGTTGATCCGGGCAATCTCATTGCCGAGCGGTG AAGGAGCGGATGGCAAGCCCGTGGCGATCAAAATATACGTGCGCCAAGAG CGGGACAACCCCTTTAGTATCCTTATATCAGACGATGGTGTGTACAGAGG GTGCGCGGGGCTTAAGAAGAGGCTTTTGGCAAGTATGAAGAGTGACTCAG ATGTTCTCGAGAATTCAGTACACAGCATGTCCGGGTCAGGAGTGCTGCCT TTGGGGACTAGAGAGCTTACGTTCGAAGGCGTTCGGTCCTCGACGGCTGA CTCCGACAGACCTCACCAGCATTCAGAACCAGACACACACCAGCGTCGTT CTCCAGTCTCAGTTCGAACTCCGGATCGAACTCCGGCCCGGACTCCGGCT CGGACTCCGGCTCGAACTCCGGCTCGAACTCCGGCTCGAACCCCGGCTCG TCGACCGACTGTGGTGGGATTGGTGGCTTCTCCTGTCCAGGGGGGCCGTG TGGGATCTACCCCTCACCGGCAATTGGCGTTGACGTTGGAAGACTTGGAA GGCTCCTCGAGCACTACGGTTGGCACCACTGTCGAGGATCGTAGCTTGGT AGCCAGCGAGGTCCGCAAAGGCGAGCGGACAGCGTCAAGCATGAGGGCTA GGAAGTCAGTGGGGCAGGACGACGTCGAGGCAGCTGCGCCAGCCGCCGTG TGATGTGGTGTAGAGTAGGCAGCTGGCAGAAGCTACGGCTTTTTGTCCGA TGCCCACAAGATTTGTTTGGAGCTGTGGGGCGGGTGGGCCAGGATTGCGG GATAGTTTGGTGCTTCGCGCTTGGGCACTGCTGTACTTGCTTCTCGGTTG TCCCCATCGCTGCCGTCGTCACCGCAGGTCAGGATTTGGATCATGTTCTA ATTTTTCGAGGTGTTACCTCTCTCTGTTCCTCTCGCTCGGTTTAATCTGA AGGGAAGCACAGGCCGTCTCGTGGGGCAGGACTTTGGAAGGCTGGTTCGG CGGGCTTCTTCTGCCCTTTTCACCCTTGAGTCGCGTAAATTTCGTTTTAC GGTGTCGTTCACGTGTTTCTTTGCGTGGTGATTTTTATGGCAATTGCATC GGCAAGACACCAAGCAAGCTCTTCGATAGGGTGATGAACTTGTTTGTCCT GCCGTCGGTTTTATCGGCGGCTCCGTATCCTACCACCAGTACGCCATCGT TGAGCAAGGGGGCGCTTCTTTGTCCTTGAAAAGTGTTTCGTTGGCTAAAC CTCTGATTGTGAAAGAGAAACTAGGTAGCGAGCACAACCAGCTCCAGCCG GCTCGGATTGTTTCACCTTCCTTCCCATTCCCATGCATTTAACATTATTC GGCTGTGTACAAGTGTCTATATCTGGCGAACAGCACGAGTTCGTTTTTTT TAGTGGTGGCAAGTTCTGGGTGATTGTAGGAGAACCACATTGGTTGGACC CTACTTAGGGGAGTGTAGCACCGATTTATGTTTGTACCTTTCGTTTTGAT TTGATTTGAGCGCGCTTCAGGCGACTATCAAGCTGCGCATCTTCGTTTTT GTGATAACACCAGCGGTGTTTGTATGTGGCGTGAACGAAGCGAATAGCCG GCCGTGAGTGTTGTATTCAACCGCTACAAACAAATGGCGGTATGTTCAAA GGTGGTGTCGTAGCAGCACGGTATGCAAGAGTAGCGTGGTAAAGGGTCAA CAGATGTTGGTCGCAAGAGGTCACGTGTTCTTCCACACCATACTTGGTGC TTTTATTTTTTTGAGAGCAGAATTCCCTGTGAATGTATCGCCAGCACGAT AGTCATATCGAAAAGACGTTGAATCCTGCCTCTGGTTTTACACGCGATTC CGCCGATTCCCGTCACTAAAAGGGCAACGGGGCGTTTATTGCGCGTGATG CTTGGGTTGCTTTAGAACGCCAAGTTGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6805:4590..7967+

>mRNA_Ecto-sp13_S_contig6805.17747.1 ID=mRNA_Ecto-sp13_S_contig6805.17747.1|Name=mRNA_Ecto-sp13_S_contig6805.17747.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1899bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6805:4590..7967+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACGATGATTATTCCGACGTCGTCGGATAACGTGGCCTTCAGCATTGC
GTTGGGTGTCTTGCTCTTGTCAGTTGTGCTACACCCGATCGTGCGGTGGT
GCTTCCACAGAATAAGGGCCAATGTGGCGTGGAAATCCATCGAAAAGCAG
CGACCTGTGGAAGTCACCAAGTACAACATATTTTCTGAAGCCTTGGGCGA
CCGCGGTAGGTGGGACATGGCACGAGTAGTAACGATCCTCCTGGCGGCGT
TTCATGTGTCGACGTGGGGGCTAGAGCTGTCCCTTGATCTTGCCTTGAGG
ACCGACGGTCCGGTAGACCTTCTGAATCGCCCGCCGCCCGTAGTGTTCCG
CACGCAGGTTGTCGACGTCGCGCACAATTTGTCAGATTGGATAGTGATGC
GCAACGAAGAAGCCATCGTTGAGGGGGGTTCTTTGGATCACATTCGCGGG
ACGTTAGTGGATGGAAACGCGACGACGACGTACCGTATCGGGGAAAGTAT
CATTCGAGGAAACACTGTGTTCGCATCGTGGTCTCCGCAGTCATCCCGCA
TCGCGTCGGGCCTTTTTTACGACATAGACGACGGCCAAGCTATTGTGTCA
GAGATTGCTTGCTCTACGCCGTCTCGAACGGGCAGCCTGTATATTACGGC
CGAGGAGAGCAACAAGTGGGGTGACGTTTTCGAGTGCGAGAGTGGACCAA
GTTTGGTCAACGCTAGTGCAAACGATCGTGCAAGCCCGCCTGTGATCCTC
TTGAACAGTACCGAGGGCGAAGCTTACTTGATTGTCGAAGAAGAGAGCAG
TTATCCGAGCTTTCTGTATTCGGTCTGGATGCCGGGAGAGGTCACACCAC
AAGAAGCGCAAATAAACCATGTATTTTATGTTTCCAGCACCACACGCCTT
GTGGAAGCGATCGTGTCGGGTATTGCGAACGGGATTGCGAATGGGGGCGG
TTGCTTGGACATGCTCACCAAGTTCAGCGTGCAGAATGCGACATATTCGT
TGAACGGCGCTCTGCGGGTTTCTCCGTTTGGCGAGCACCCCCGCTCGTCT
TCGGTGGAAAGCCTAGACCAGGTAGAGCCCATTGTTGCAGGTGTACTGGT
CAGCGACATGGGCACGGTGTGTGGGGTAATGCTTATGGTGGTGACTGGCG
CGGCGTTTGCCGGGTGCTTGTGCTTTCACTCGCGCAAGGCTTTAGACGTA
TACGATCGCGACCAGTTGATCCGGGCAATCTCATTGCCGAGCGGTGAAGG
AGCGGATGGCAAGCCCGTGGCGATCAAAATATACGTGCGCCAAGAGCGGG
ACAACCCCTTTAGTATCCTTATATCAGACGATGGTGTGTACAGAGGGTGC
GCGGGGCTTAAGAAGAGGCTTTTGGCAAGTATGAAGAGTGACTCAGATGT
TCTCGAGAATTCAGTACACAGCATGTCCGGGTCAGGAGTGCTGCCTTTGG
GGACTAGAGAGCTTACGTTCGAAGGCGTTCGGTCCTCGACGGCTGACTCC
GACAGACCTCACCAGCATTCAGAACCAGACACACACCAGCGTCGTTCTCC
AGTCTCAGTTCGAACTCCGGATCGAACTCCGGCCCGGACTCCGGCTCGGA
CTCCGGCTCGAACTCCGGCTCGAACTCCGGCTCGAACCCCGGCTCGTCGA
CCGACTGTGGTGGGATTGGTGGCTTCTCCTGTCCAGGGGGGCCGTGTGGG
ATCTACCCCTCACCGGCAATTGGCGTTGACGTTGGAAGACTTGGAAGGCT
CCTCGAGCACTACGGTTGGCACCACTGTCGAGGATCGTAGCTTGGTAGCC
AGCGAGGTCCGCAAAGGCGAGCGGACAGCGTCAAGCATGAGGGCTAGGAA
GTCAGTGGGGCAGGACGACGTCGAGGCAGCTGCGCCAGCCGCCGTGTGA
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