mRNA_Ecto-sp13_S_contig6805.17747.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6805.17747.1 vs. uniprot
Match: A0A6H5JPI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPI8_9PHAE) HSP 1 Score: 1069 bits (2764), Expect = 0.000e+0 Identity = 580/632 (91.77%), Postives = 599/632 (94.78%), Query Frame = 3
Query: 255 MTMIIPTSSDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPVVFRTQVVDVAHNLSDWIVMRNEEAIVEGGSLDHIRGTLVDGNATTTYRIGESIIRGNTVFASWSPQSSRIASGLFYDIDDGQAIVSEIACSTPSRTGSLYITAEESNKWGDVFECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVWMPGEVTPQEAQINHVFYVSSTTRLVEAIVSGXXXXXXXGGGCLDMLTKFSVQNATYSLNGALRVSPFGEHPRSSSVESLDQVEPIVAGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDRDQLIRAISLPSGEGADGKPVAIKIYVRQERDNPFSILISDDGVYRGCAGLKKRLLASMKSDSDVLENSVHSMSGSGVLPLGTRELTFEGVRSSTADSDRPHQHSEPDTHQRRSPVSVRTPDRXXXXXXXXXXXXXXXXXXXXXXXXXXTVVGLVASPVQGGRVGSTPHRQLALTLEDLEGSSSTTVGTTVEDRSLVASEVRKGERTASSMRARKSVGQDDVEAAAPAAV 2150
MTMIIPTSSDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPP+VFRTQVVDVAHN SDWIV+RNEEAIVEGGSLDHIRGTLVDGNATTTYRIGESIIRGNTVFASWSPQSSRIASGLFYDID+GQAIVSEIACSTPSRTGSLYITAEES+KWGDV ECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVW+PGEV PQEAQ+NH FYVSSTTRLVEAIVSGXXXXXXXGGGCLDMLTKFSVQNATYSLNGALRVSPFGEHP SSSVE LDQVEPIV GVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDRDQLIRAISLPSGEGADGKPVA+KIYVRQER+N FSI+ISDDGVYRGCAGLKKRLLASMKSDS VLENS HSMSGSGVLP+GTRELTFEGVRSSTADSDRPHQ +EPDTHQRRSPV+V TP RXXXXXXXXXXXXXXXX T+VGLVASPVQG VG+TP RQ+ALTLE+L S S+ VGTTVED SLVASEV GERTAS+MRARKSVGQ+DVEAAAPAAV
Sbjct: 1 MTMIIPTSSDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPIVFRTQVVDVAHNFSDWIVIRNEEAIVEGGSLDHIRGTLVDGNATTTYRIGESIIRGNTVFASWSPQSSRIASGLFYDIDNGQAIVSEIACSTPSRTGSLYITAEESSKWGDVSECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVWVPGEVKPQEAQLNHAFYVSSTTRLVEAIVSGXXXXXXXGGGCLDMLTKFSVQNATYSLNGALRVSPFGEHPSSSSVERLDQVEPIVVGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDRDQLIRAISLPSGEGADGKPVALKIYVRQERNNGFSIIISDDGVYRGCAGLKKRLLASMKSDSGVLENSAHSMSGSGVLPVGTRELTFEGVRSSTADSDRPHQRAEPDTHQRRSPVTVPTPARXXXXXXXXXXXXXXXXRL--------TLVGLVASPVQGASVGATPRRQMALTLENLGDSLSSMVGTTVEDHSLVASEVPNGERTASTMRARKSVGQEDVEAAAPAAV 624
BLAST of mRNA_Ecto-sp13_S_contig6805.17747.1 vs. uniprot
Match: D7FV77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV77_ECTSI) HSP 1 Score: 472 bits (1214), Expect = 1.000e-154 Identity = 281/311 (90.35%), Postives = 292/311 (93.89%), Query Frame = 3
Query: 1215 MLTKFSVQNATYSLNGALRVSPFGEHPRSSSVESLDQVEPIVAGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDRDQLIRAISLPSGEGADGKPVAIKIYVRQERDNPFSILISDDGVYRGCAGLKKRLLASMKSDSDVLENSVHSMSGSGVLPLGTRELTFEGVRSSTADSDRPHQHSEPDTHQRRSPVSVRTPDRXXXXXXXXXXXXXXXXXXXXXXXXXXTVVGLVASPVQGGRVGSTPHRQLALTLEDLEGSSSTTVGTTVEDRSLVASEVRKGERTASSMRARKSVGQDDVEAAAPAA 2147
MLTKFSVQNATYSLNGALRVSPFGEHPRSSSVESLDQVEPIVAGVLVS+MGTVCG MLMVVTGAAFAGCLC HSRKALDVYDRDQLIRAISLPSGEGADGKP AIKIYVRQE+DN FSI+ISDDGVYRGCAGLKKRLLASMKSDSDVLENSVHSMSGSGVLPLGTRELTF+GVRSSTADSD PHQH+EPDTHQRRSPV V XXXXXXXXXXXXXXXXXXXXXXXX TVVGLVASPV+G VG+TP RQLALTLEDLEGSSSTTVGTTVEDRSLVASEV +G+RTASS RARKS+G+DDVEA APAA
Sbjct: 1 MLTKFSVQNATYSLNGALRVSPFGEHPRSSSVESLDQVEPIVAGVLVSNMGTVCGAMLMVVTGAAFAGCLCCHSRKALDVYDRDQLIRAISLPSGEGADGKPAAIKIYVRQEQDNAFSIVISDDGVYRGCAGLKKRLLASMKSDSDVLENSVHSMSGSGVLPLGTRELTFDGVRSSTADSDGPHQHAEPDTHQRRSPVPV----PXXXXXXXXXXXXXXXXXXXXXXXXRTTVVGLVASPVRGASVGATPRRQLALTLEDLEGSSSTTVGTTVEDRSLVASEVPRGDRTASSTRARKSIGRDDVEAPAPAA 307
BLAST of mRNA_Ecto-sp13_S_contig6805.17747.1 vs. uniprot
Match: D7FRU1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRU1_ECTSI) HSP 1 Score: 253 bits (645), Expect = 3.010e-69 Identity = 160/441 (36.28%), Postives = 233/441 (52.83%), Query Frame = 3
Query: 318 LLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPVVFRTQVVDVAHNLSDWIVMRNEEAIVEGGS----LDHIRGTLVDGNATTTYRI------------GESIIRGNTVFASWSPQSSRIASGLFYDIDDGQAIVSEIACSTPS-RTGSLYITAEESNKWGDVFECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVWMPGEVTPQEAQINHVFYVSSTTRLVEAIVSGXXXXXXXGGGCLDMLTKFSVQNATYSLNGALRVSPFGEHPRSSSVESLDQVEPIVAGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDRDQLIRAISLPSGEGAD--GKPVAIKIYVRQERDNPFSILISD 1583
LL+ LHP + W FHR+RA AW+ I+K++ VEVT YN+ +E G RG WD AR + ++LA F +++WGLELS+DLA +G DLLNRPPPV R + D N W V+ + + L+H+ + D +A + Y I ++ I G + ASW + S LFYDI+ A V + CS + + +Y+ + WG+ +CE GP + + P V+L N G +IVEE SSYP+FLYSVW ++ ++F+V ST RLVEA+++G GG C +L FS Y +G R SPFGE P +V D +E I AGV ++ VC + +M T +C + +DVYDRD+L+RA+SL D + AI+I+VR+E ++ I+D
Sbjct: 33 LLAYFLHPAIEWAFHRLRAYRAWRCIQKRQAVEVTSYNLMAEVFGGRGSWDSARNIAVILAVFSLASWGLELSMDLA-SLEGEADLLNRPPPVFLRPETNDT--NTDPWQVLTLSDIDPDYNGNWRGLEHLN--VEDTHANSRYYIVKDTRDYLGKTAKDTFINGEILVASWDDKPS-----LFYDING--ANVDSLECSGETLKDAEVYLGTD---LWGNALDCERGPRPTGLTTSP---PAVVLTNGDSGLVSVIVEESSSYPTFLYSVWTAEG--SDSVELAYLFHVHSTVRLVEAVITGIVHGETEGGACFGLLRVFSETRVEYE-DGLDRASPFGEIPTGDTVLVQD-LETIEAGVEINMNALVCLLWVMASTAVCVVWLICLRNSIGMDVYDRDELLRAVSLQGHASRDPAAEHPAIRIFVRREDSGHITVFIND 451
BLAST of mRNA_Ecto-sp13_S_contig6805.17747.1 vs. uniprot
Match: D8LC87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC87_ECTSI) HSP 1 Score: 241 bits (615), Expect = 5.000e-63 Identity = 176/513 (34.31%), Postives = 252/513 (49.12%), Query Frame = 3
Query: 267 IPTSSDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPVVFRTQVVDVAHNLSDWIVMRNEEAIVEGGSLDHIRGTLVDGNATTTYRIG-----------ESIIRGNTVFASWSPQSSRIASGLFYDIDDGQAIVSEIACSTPSRTGSLYITAEESNKWGDVFECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVWMPGEVTPQEAQINHVFYVSSTTRLVEAIVSGXXXXXXXGGGCLDMLTKFSV-----QNATYSLNGALRVSPFGEHPRSSSVESLDQVEPIVAGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDRDQLIRAISLPSGEGADGKPVA---IKIYVRQERDNPFSILIS-DDGVYRGCAG-LKKRLLASMKSDSDVLENSVHSMS--GSGVLPLGTRELTFEGVR 1736
+PT F+I L + L+ LHP + + ++RA AW+++EK + V+VT Y + SE RG+WD AR VT+LLAAF + +W LELSL++ +G LLN P P+ Q +L+ W VM EE E G + + A +TY + E+ + G V ASW P A GL+Y + A V I C G +Y+ E + WG C GP + N +S PVI+L +EGE +IVEE ++PSFLYSVW G +E + + F++SST RL EA+V+G GG C +L F+ + + R PFGE P V+SL VE I GVL++ V V L+V++ +C S +DVYDRD+L+RAIS +G D P ++IYV++ER +++IS D GCA L +R V + H++ G LPLG + VR
Sbjct: 18 LPTQEPT--FAIGLSFVFLAYFLHPRIEATYQKVRAARAWRAVEKHKRVDVTTYPMVSEVFRGRGKWDAARAVTLLLAAFSLGSWVLELSLEID-HVEGGARLLNLPVPIYLVNQT-----SLA-WQVMPLEEINPEYGRAWRDLDNMEEKQAKSTYFVTGYREHAWSKKIETHVDGEIVVASWDPDDKHRA-GLYYG-SNHTATVDSITCK--GTGGDVYLYDEAA--WGSFLWCGEGP----LAENKTSSQPVIILEKSEGEVSVIVEEVGTHPSFLYSVWTAGSADSKE--LAYSFHISSTVRLAEAVVTGIVNGETGGGPCFGLLRTFNAGRDMEEGISTGEEERERAKPFGEKPEDDKVDSLQDVETIEVGVLMNTNALVAFVCLLVLSLVGIGWSMCLESSVEMDVYDRDELLRAIS-QQAQGEDNDPSTRSDMRIYVQKERGGELNVVISASDDDQNGCARFLLRREPTPTVHPIPVADAVSHALDDHGGAPLPLGRPRMFIGSVR 508
BLAST of mRNA_Ecto-sp13_S_contig6805.17747.1 vs. uniprot
Match: D7FRT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT6_ECTSI) HSP 1 Score: 225 bits (574), Expect = 1.060e-58 Identity = 167/523 (31.93%), Postives = 255/523 (48.76%), Query Frame = 3
Query: 297 SIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPVVFRTQVVDVAHNLSDWIVMRNEEAIVEGGSLDHIRGTLVD------GNATTTYRIG-----------ESIIRGNTVFASWSPQSSRIASGLF--------YDIDDGQAIVSEIACST---PSRTGSLYITAE-ESNKWGDVFECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVWMPGEVTPQEAQINHVFYVSSTTRLVEAIVSGXXXXXXXGGGCLDMLTKFSVQNATYSLNGA---LRVSPFGEHPRSSSVESLDQVEPIVAGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDRDQLIRAISLPS-GEGAD--GKPVAIKIYVRQERDNPFSILISDDGV--------YRGCAGLKKRLLASMKSDSDVLENSVHSMSGSGVLPLGTRELTFEGVR 1736
+I L + L+ LHP+V W +HR+RA AW++IEK R VEVT Y+ E L RG WD R+VT+LL F+V++WGLEL LD + L +P PV + D+ +N + W V+ +E + G D+ G+ +D A + Y + E I G + A+W P + S F Y+ A+V + CS+ P + +Y +S +WG V ECE+GP L N ++A P +IL + E ++I+EE +++ SFLYSVW + + + F+++ST RL EA+V+G GGGC ML FS A ++ PFGE+P+S VE L VE I AG+ ++ C V ++ +T + +D+YDRD+LIRA+SL G D + ++I+VR+E + S+ ISD G + C + + S +D+ + N G P G+R + GVR
Sbjct: 36 AIGLSFIGLAYFLHPLVVWAYHRVRAYRAWRAIEKGRAVEVTAYSNREEILRGRGVWDATRIVTVLLVVFNVASWGLELMLD-QYSHENEACPLTQPSPVYRK----DLDNN-ARWQVLNLDE--INGEDRDY-NGSWLDLPNVSKTEAKSLYYVENFKRSAWSDPVEKDISGEIIVANWDPAIAESLSFSFGESISSGSYEEGTATAVVEAVNCSSSSDPLKDAPVYRKMNNKSEEWGRVVECEAGPRLANG--GEQAQPAIILTQNGTNETHVIIEETTTFLSFLYSVW---KTNGDSVTLTYAFHIASTVRLAEAVVTGIVLGESSGGGCFGMLRAFSRGPEPPEDEYAKMMVKALPFGENPQSGKVEKLTDVETIEAGIDINVAAMTCLVCVLSLTVVGIVWAVYLGRSTGMDIYDRDELIRAVSLQGHGRAVDLAAQHSRMRIFVRREDNGGISVAISDTGQAEPGGCWRFWPCKKVGETADPSPVADTVIQNNDDF---GGASAPAGSRTVWLGGVR 541
BLAST of mRNA_Ecto-sp13_S_contig6805.17747.1 vs. uniprot
Match: A0A6H5JST2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JST2_9PHAE) HSP 1 Score: 224 bits (571), Expect = 2.830e-58 Identity = 167/517 (32.30%), Postives = 259/517 (50.10%), Query Frame = 3
Query: 297 SIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPVVFRTQVVDVAHNLSDWIVMRNEEAIVEGGS---LDHIRGT------LVDGNATTTYRIG-ESIIRGNTVFASWSPQSSRIASGLF--------YDIDDGQAIVSEIACSTPSRTGSLYITAEESNK---WGDVFECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVWMPGEVTPQEAQINHVFYVSSTTRLVEAIVSGXXXXXXXGGGCLDMLTKFSV-QNATYSLNGAL-RVSPFGEHPRSSSVESLDQVEPIVAGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDR-----DQLIRAISLPSGEGADGKPVA----IKIYVRQERDNPFSILISDDGVYR--GCAGLKK-RLLASMKSDSDVLENSVHSMSGSG--VLPLGTRELTFEGVR 1736
+I+L ++L+ VLHP+V +HR+RA AW++IE R VEVT Y+ E L RG WD R+VT+LL F+V++W LEL LDL + L +PPPV + + + + + E+ +G S L ++ T V+ + + G E I G+ + A+W P + + F Y+ A+V + CS+ R + + +NK WG V ECE GP L N S ++A P +IL E ++I+EE +++ SFLYSVW + + +++ F+++ST RL EA+V+G GGGC ML FS N G + + PFGE+P+S V+ L VE I AG+ ++ C V ++ +T + +D+YDR D+LIRA+SL G+ + P A I+I+VR+E + S+ ISD G GC + +A S V + + + G G +P G+R + GVR
Sbjct: 36 AISLSFIVLAYVLHPLVIQAYHRVRAYRAWRAIENGRVVEVTAYSDREEILRGRGVWDATRIVTVLLVVFNVASWVLELMLDL-YSFENEAYPLTQPPPVYRENIQGNASWQVLNLDEINGEDRKYDGSSWFDLPNVSETEAKSLYYVENFKRSAWSDGVEKDISGDIIVANWDPAIAGSLNFFFGENILSRSYEEKTATAVVEAVDCSSSGRLKDAPVYRKINNKSEEWGRVVECEVGPRLPNGS--EQAQPAIILTQHGTNETHVIIEETTTFLSFLYSVW---KTNGESVNLSYAFHIASTVRLAEAVVTGIVLGESTGGGCFGMLRAFSRGPNPPEDEYGEMIKALPFGENPQSGKVQKLTDVETIEAGIDINVAAMSCLVCVLSLTVVGVVWAVYLGRSTGMDIYDRWGTAWDELIRAVSL-QGQRRELDPAAEHSKIRIFVRREDNGSISVAISDTGQAEPGGCWRFWPCKKVAETADPSPVADTVIQNNDGFGGASVPAGSRTVWLGGVR 545
BLAST of mRNA_Ecto-sp13_S_contig6805.17747.1 vs. uniprot
Match: D7FRU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU0_ECTSI) HSP 1 Score: 207 bits (527), Expect = 3.690e-52 Identity = 142/426 (33.33%), Postives = 215/426 (50.47%), Query Frame = 3
Query: 258 TMIIPTSSDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPVVFRTQVVDVAHNLSDWIVMRNEEAIVE----GGSLDHIRGTLVDGN---ATTTY----RIGESIIRGNTVFASWSPQSSRIASGLFYDIDDGQAIVSEIACSTPSRTGSLYITAEESN----KWGDVFECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVWMP--GEVTP---QEAQINHVFYVSSTTRLVEAIVSGXXXXXXXGGG--CLDMLTKFSVQNAT--YSLNGALRVSPFGEHPRSSSVESLDQVEPIVAGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDR 1463
T +PT + +I L + L+ +LHP + + R+RA AW+ IEKQ+ V+VT Y + SE RGRWD ARV+T+LL AF +++W LELS+DL D P LL +PPPV F+ + + W V+ E E L ++ T TY + + I G + ASWSP+ L Y +V I CS+ +T + +WG V EC+ GP + N + ++ P +IL G+ ++IVEE S +PSFLYSVW +T +I + F+++ST RL EA+V+G GGG C +L +S + T + G + +PFGE P + +V+SL++VE I GV+++ V V L+V++ F S+ +D+YDR
Sbjct: 12 TWTMPTGGVDSTLAIGLSFIFLAYILHPAIEAAYQRVRAYHAWRCIEKQQRVDVTTYLMLSELFAGRGRWDAARVITLLLLAFSLASWILELSMDLN-PVDNPAHLLTQPPPV-FKWDAENDNGEVP-WHVLNLTEIDSEYQGNWWKLPNVFETFAKSRYYVQNDTYYAWSKRKDRYIDGEIIVASWSPEEK--PDSLIYG-QSATVMVDGITCSSNGTRDDTTVTRRNATDHIEEWGTVLECDRGPGITNGTG--KSKPSIILTAHDGGDTHVIVEETSKHPSFLYSVWNATGDSITAAGDSSVEIAYAFHIASTVRLAEAVVTGIVNGVAGGGGGACFGLLRAYSKGSDTPEFEEYGTEKATPFGEDPENGAVDSLNEVEIINTGVMMNANAMVAFVWLLVLSFIGFGMTFFLRSKIDMDIYDR 429
BLAST of mRNA_Ecto-sp13_S_contig6805.17747.1 vs. uniprot
Match: A0A6H5JMP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP8_9PHAE) HSP 1 Score: 179 bits (453), Expect = 6.820e-43 Identity = 148/485 (30.52%), Postives = 234/485 (48.25%), Query Frame = 3
Query: 267 IPTSSDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPVVFRTQVVDVAHNLSDWIVMRNEEAI--VEGGSLDHIRGTLVDGNATTTYRIGE-----------SIIRGNTVFASWSPQSSRIASGLFYDIDDGQAIVSEIACSTPSRTGS-----LYITAEESN---KWGDVFECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVW------MPGEVTPQEAQINHVFYVSSTTRLVEAIVSGXXXXXXX--GGGCLDMLTKFS---VQNATYS-LNGALRVSPFGEHPRSSSVESLDQVEPIVAGVLVSDMGTVCGVMLMVVTGAAFAGCLCFHSRKALDVYDRDQLIRAISLPSGEGADGKPV---AIKIYV-RQERDNPFSILISD-DGVYRGCA 1607
+PT + N I L + L+ V+HP ++ + R+RA AW+ IE+ V+VT Y + E LG R D ARVV +LL F ++ W LELS+D P PPPV F+ + + W V+ E EG L+ + + + A + Y + E I G+ + A+WS + L Y ++ +V I CS+ + + + +T +N +WG V EC+ GP++V N + P +IL G+ ++IVEE SS PSFLYSVW + +I + F++SST RL EA+V+ GG C +L ++ +S L G + PFGE P S + SL +E I+ GV ++ G V +++ ++ A L + +D+Y+RD+L+RA +L + +G P A++I V R++R +I IS+ D GCA
Sbjct: 13 LPTGTMNTTLVIGLAYIFLAYVVHPTTKYAYLRVRAYRAWRRIEEGERVDVTDYPTWMELLGGCARRDTARVVALLLLLFALALWYLELSIDW-FPVSVPAYSQTLPPPV-FQWSAGNSTP--TPWHVLSLNEIAPEYEGDWLN--QPNVFETVAKSRYYVKEYKNYPWSEPKDRYINGDIIVANWSRNTK--PDNLVYG-ENATVMVDGITCSSGGKAQTFTDDPIPVTLNRTNGIEEWGTVLECDQGPAVVEVIGNSK--PSIILTERETGDTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGVAGDGGGACFGLLRAYNRGPYDTRDFSALYGKQKARPFGEDPVSHYIYSLKDIENIIIGVEMNTNGMVAFALVIGLSFIGIALTLFLCPKYEMDIYNRDELLRATNLQA-QGLPDDPSRHSAMRIEVQREDRSRHLTITISESDSERSGCA 485
BLAST of mRNA_Ecto-sp13_S_contig6805.17747.1 vs. uniprot
Match: D7FRT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT9_ECTSI) HSP 1 Score: 162 bits (409), Expect = 1.000e-37 Identity = 144/474 (30.38%), Postives = 223/474 (47.05%), Query Frame = 3
Query: 267 IPTSSDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPVVFRTQVVDV----AHNLS--DWIVMRNEEAI--VEGGSLDHIRGTLVDGNATTTYRIGE-----------SIIRGNTVFASWSPQSSRIASGLFYDIDDGQAIVSEIACSTPSRTG---------SLYITAEESNKWGDVFECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVW------MPGEVTPQEAQINHVFYVSSTTRLVEAIVSGXXXXXXX--GGGCLDMLTKFS---VQNATYSLN-GALRVSPFGEHPRSSSVESLDQVEPIVAGVLVSDMGTVCGVMLMVVTGAAFAGC---LCFHSRKALDVYDRDQLIRAISLPSGEGADGKPV---AIKIYVRQE 1550
+PT + N I L + L+ V+HP ++ + R+RA AW+ IE+ V+VT Y + E LG+ GR D ARVV +LL F +++W L+LS+D+ PV P P +T V A N + W V+ E EG L+ + + + A + Y + E I G+ + A+WS + L Y + +V I CS+ +L + WG V EC+ GP+ ++ + + P +IL G+ ++IVEE SS PSFLYSVW + +I + F++SST RL EA+V+ GG C +L ++ +S + G + PFGE P S + SL E I+ GV +M T V +V G +F G L + +DVY+RD+L+RAI+L + +G P A++I V++E
Sbjct: 13 LPTGTMNTTLVIGLAYIFLAYVVHPATQYAYLRVRAYRAWRRIEEGERVDVTNYPTWMELLGNCGRRDTARVVALLLLLFALASWILDLSIDVF-----PV-----PNPAYSQTLAPQVFKWPASNSTGASWHVLSLTEIDQEYEGDWLN--QPNVFETVAKSRYYVKEYKNYVWSEPKDRYINGDIIVANWSRNTK--PDNLVYG-ERATVMVDGITCSSGGEADIFTDDPIPVTLKNGTDAIEVWGTVLECDQGPAGIDVIGSSK--PSIILTERETGDTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGVAGEGGGACFGLLRAYNRGPYDTVDFSDSYGKQKAMPFGEDPVSHYINSLKDNEHIIVGV---EMNTNGMVAFALVIGLSFTGIVLTLFLCPKYEMDVYNRDELLRAINLQA-QGLPDDPSRHSAMRIEVQRE 465 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6805.17747.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6805.17747.1 >prot_Ecto-sp13_S_contig6805.17747.1 ID=prot_Ecto-sp13_S_contig6805.17747.1|Name=mRNA_Ecto-sp13_S_contig6805.17747.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=633bp MTMIIPTSSDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQback to top mRNA from alignment at Ecto-sp13_S_contig6805:4590..7967+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6805.17747.1 ID=mRNA_Ecto-sp13_S_contig6805.17747.1|Name=mRNA_Ecto-sp13_S_contig6805.17747.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3378bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6805:4590..7967+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6805:4590..7967+ >mRNA_Ecto-sp13_S_contig6805.17747.1 ID=mRNA_Ecto-sp13_S_contig6805.17747.1|Name=mRNA_Ecto-sp13_S_contig6805.17747.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1899bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6805:4590..7967+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |