prot_Ecto-sp13_S_contig68.17738.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig68.17738.1
Unique Nameprot_Ecto-sp13_S_contig68.17738.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1069
Homology
BLAST of mRNA_Ecto-sp13_S_contig68.17738.1 vs. uniprot
Match: D8LBV2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV2_ECTSI)

HSP 1 Score: 970 bits (2507), Expect = 0.000e+0
Identity = 922/1046 (88.15%), Postives = 942/1046 (90.06%), Query Frame = 0
Query:    1 MRHSSGAARFLAALALLLPASSLAAAAPLGTTAAAGAVRGLEGEEVAVGFRGRLAARTVRRLQEDEGCTENTSVGDAEAGIAQYDDPDACLREGPLVGCNVLGISSCRLCVTNGGEAADYLPSCPEEVEEIIEEIFPQTRDTDAPSTAPPGTETPLLEGATPAPADVVATPIPSEVGGTSSPAATASPAQ------TAAPGVVSXXXXXXXXXXXXXXXXXXXXXLSPD------------------ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTAXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTXXTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTVPTSAPGAXXXXXXXXXXXXXXXXXXXWAPNLVRELPXXXXXXXXXXXXXXXXSLLAPTLSPFAFTGTPTAAPTESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----VDDEPDGSLIGSITIISDEEPECAGAGNCEEVVEDGLESSLGRNGTVNVTDVTVTSTAAAADAGRRVLLFVADGDVADDSRRNRLLRGSRQLQEEEEAAGNQTETEIEYESSPDQSSNLTEAQQAAEQINALAETGIADLLDEMGLPPDTEVEIGVTKFVQLGTITDDAEDWDSIFSAALAGDRSISTAAYLGFALXXXXXXXXXXXXXXXXMLCLSKKDSRRRNAGVVRLEKVEESTAINDDGNDEFELPTKRMSEIKEQRRGSSFMNRIPFFGSSAKMKAGETDIEAGTTRRVAEDQIFAYPPHSSGGDSGKTQDAADASFPAPLGAPSGNDFFYATQRFADPQVNSPSPRASTGALAAXXXXXXXXXXXXXXXXXXXXXXXXXXXX----GEVSDEWPLPISTTTVGT-GASGESGLSSSTISAVSAGSMETKHDVESDARASSLSPAGRAGSSGAI 1013
            MRHSSGAARFLAALALLLPAS+LAAAAPLGTTAA GAVRGLEGEEVAVGFRGRLAARTVRRLQEDEGCTENTSVGDAEAGIAQYDDPDACLR+GPLVGCNVLGISSCRLCVTNGGEAADYLPSCPE VEEIIEE+FPQTRDTDAPSTAPP TETPLLEGATPAPAD+VATPIPSEVGGTSSPAA            T+AP + +  XXXXXXXXXXXXXXXXXXX                      AT  XXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXX XXXXX XXXXX+   X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    XXXX  XX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTVPT AP  XXXXXXXXXXXXXXXX   WAPNLVRELPXXXXXXXXXXXXXXXXSLLAPT+SPFAFTGTPTAAPTE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    VDDEPDGSLIGSITIISDEEPEC GAGNCEEVVEDGLESSLGRNGTVNVTDVTVTSTAAAADAGRRVLLFVADGDVAD+S RNRLLRGSRQLQEEEEAAGNQTETEIEYESSPDQSSNLTEAQQAAEQINALAETGIADLLDEMGLPPDTEVE+GVTKFVQLGTITDDAEDWD IFSAALA DRSISTAAYLGFALXXXXXXXXXXXXXXXXMLC+SKKDSRRR++GVVRLEK+EESTAINDDGNDEFELPTKRMSEIKEQRRGSSFMN+IPFFG+S+KMKAGETDIEAGTTRRVAED IFAYPPHSSGGDSGKTQDAADASFPAPLGAPSGNDFFYATQRFADPQVNSPSPR STGALAA XXXXXXXXXXXXX                  GEVS+EWPLPISTTTVG  GA G+SGLSSSTISAVSAGSMETKHDVESDARASSLSPAGRAGSSGAI
Sbjct:    1 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 1046          
BLAST of mRNA_Ecto-sp13_S_contig68.17738.1 vs. uniprot
Match: A0A6H5KWL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWL3_9PHAE)

HSP 1 Score: 937 bits (2422), Expect = 2.780e-310
Identity = 931/1087 (85.65%), Postives = 940/1087 (86.48%), Query Frame = 0
Query:    1 MRHSSGAARFLAALALLLPASSLAAAAP--LGTTAAAGAVRGLEGEEVAVGFRGRLAARTVRRLQEDEGCTENTSVGDAEAGIAQYDDPDACLREGPLVGCNVLGISSCRLCVTNGGEAADYLPSCPEEVEEIIEEIFPQTRDTDAPSTAPPGTETPLLEGATPAPADVVATPIPSEVGGTSSPAATASPAQTAAPGVVSXXXXXXXXXXXXXXXXXXXXXLSPDATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTAXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------LTXXTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTVPTSAPGAXXXXXXXXXXXXXXXXXXXWAPNLVRELPXXXXXXXXXXXXXXXXSLLAPTLSPFAFTGTPTAAPTESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDDEPDGSLIGSITIISDEEPECAGAGNCEEVVEDGLESSLGRNGTVNVTDVTVTSTAAAADAGRRVLLFVADGDVADDSRRNRLLRGSRQLQEEEEAAGNQTETEIEYESSPDQSSNLTEAQQAAEQINALAETGIADLLDEMGLPPDTEVEIGVTKFVQLGTITDDAEDWDSIFSAALAGDRSISTAAYLGFALXXXXXXXXXXXXXXXXMLCLSKKDSRRRNAGVVRLEKVEESTAINDDGNDEFELPTKRMSEIKEQRRGSSFMNRIPFFGSSAKMKAGETDIEAGTTRRVAEDQIFAYPPHSSGGDSGKTQDAADASFPAPLGAPSGNDFFYATQRFADPQVNSPSPRASTGALAAXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GEVSDEWPLPISTTTVGTGASGESGLSSSTISAVSA-GSMETKHDVESDARASSLSPAGRAGSSGAIXXXXXXXXXXXXXXXXXXXXXXXXGAGAAVGAAAVTEQKRDDESLEDIEARY 1065
            MRHSSGAARFLAAL LLLPAS+LAAAAP  LGTT AAGAVRGLEGEEVAVGFRGRLAA TVRRLQE+EGCTENTSVGDAEAGIAQYDDPDACLREGPLVGCNVLGISSCRLCVTNGGEAADYLPSCPEEVEEIIEEIFPQTRDTD PSTAPP TETPLLEGATPAPADVV                      TAAPGVVS XXXXXXXXXXXXXXXXXXXXLSPDATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    X XXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXX XXXXX    X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  L XXTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTVPT APG XXXXXXXXXXXXXXXX   WAPNL+RELPXXXXXXXXXXXXXXXXSLLAPT+SP AFTGTPTAAPTE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDDEPDGSLIGSITIISDE PECAGAGNCEEVVEDGLESSLGRNGTVNVTDVTVTSTAAAADAGRRVLLFVADGDVADDS RNRLLRGSRQLQEEE AAGNQTETEIEYESSPDQSSNLTEAQQAAEQINALAETGIADLLDEMGLPPDTEVEIGVTKFVQLGTITDDAEDWDSIFSAALA DRSISTAAYLGFALXXXXXXXXXXXXXXXXMLCLSKKDSRRRNAGVVRLEK+EESTAINDDG+DEFELPTKRMSEIKEQRRGSSFMNRIPFFGSSAKMKAGETDIEAGTTRRVAED IFAYPPHSSGGDSGKTQDAADASFPAPLGAPSGNDFFYATQRFADPQVNSPSPR STGALA     XXXXXXXX                 GEVS++WPLPISTTTVG G                  GSMETKHDVESDARASSLSPAGRAGSSGAI          XXXXXX   XXXXX           TEQKRDD SLEDIE  +
Sbjct:    1 MRHSSGAARFLAALTLLLPASTLAAAAPAPLGTTVAAGAVRGLEGEEVAVGFRGRLAALTVRRLQEEEGCTENTSVGDAEAGIAQYDDPDACLREGPLVGCNVLGISSCRLCVTNGGEAADYLPSCPEEVEEIIEEIFPQTRDTDVPSTAPPATETPLLEGATPAPADVVXXXXXXXXXXXXXXXXXXXXXXTAAPGVVSTXXXXXXXXXXXXXXXXXXXXLSPDATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTAXGXXXXXXXXXXXXXXXXXAIVTTAXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAXXTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTVPTLAPGXXXXXXXXXXXXXXXXXGETWAPNLIRELPXXXXXXXXXXXXXXXXSLLAPTVSPSAFTGTPTAAPTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDDEPDGSLIGSITIISDEAPECAGAGNCEEVVEDGLESSLGRNGTVNVTDVTVTSTAAAADAGRRVLLFVADGDVADDSSRNRLLRGSRQLQEEE-AAGNQTETEIEYESSPDQSSNLTEAQQAAEQINALAETGIADLLDEMGLPPDTEVEIGVTKFVQLGTITDDAEDWDSIFSAALADDRSISTAAYLGFALXXXXXXXXXXXXXXXXMLCLSKKDSRRRNAGVVRLEKIEESTAINDDGDDEFELPTKRMSEIKEQRRGSSFMNRIPFFGSSAKMKAGETDIEAGTTRRVAEDHIFAYPPHSSGGDSGKTQDAADASFPAPLGAPSGNDFFYATQRFADPQVNSPSPRTSTGALATGAAAXXXXXXXXVADRRRPATAAAAPAHAGEVSEQWPLPISTTTVGAGGXXXXXXXXXXXXXXXXXGSMETKHDVESDARASSLSPAGRAGSSGAINSGDAAGATTXXXXXXGVTXXXXXXXXXXXXXXXXTEQKRDDVSLEDIEQEH 1086          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig68.17738.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBV2_ECTSI0.000e+088.15Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KWL3_9PHAE2.780e-31085.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 775..1068
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 749..774
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..748
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.878
NoneNo IPR availableTMHMMTMhelixcoord: 752..774
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig68contigEcto-sp13_S_contig68:24094..29430 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig68.17738.1mRNA_Ecto-sp13_S_contig68.17738.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig68 23909..29686 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig68.17738.1 ID=prot_Ecto-sp13_S_contig68.17738.1|Name=mRNA_Ecto-sp13_S_contig68.17738.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1069bp
MRHSSGAARFLAALALLLPASSLAAAAPLGTTAAAGAVRGLEGEEVAVGF
RGRLAARTVRRLQEDEGCTENTSVGDAEAGIAQYDDPDACLREGPLVGCN
VLGISSCRLCVTNGGEAADYLPSCPEEVEEIIEEIFPQTRDTDAPSTAPP
GTETPLLEGATPAPADVVATPIPSEVGGTSSPAATASPAQTAAPGVVSTA
SPGATSAPAIATTVAPGATLSPDATAAPGATSAPAIATTAAPGATLPPDA
TAAPGATSAPAIATTAAPGATLAPGTTAAPGATSAPAIATTAAPGATLAP
GATAAPGATSAPAIATTAAPGATLAPAATAAPGATTAPGATAAPGATAAP
GATSAPAIVTTAAPGATLAPDATAAPGATAAPGATAAPGATLTPGTTAAP
GATSTPAIVTTAAPGATLAPGTTAAPGATAAPAPTVPTSAPGATSAPVAT
IAPGTTLSPGETWAPNLVRELPTLAPGATLAPTPTAAPSLLAPTLSPFAF
TGTPTAAPTESPTAVPTGSPTAMPTGAPTGAPTFAPTGSPTAVPTSSPTV
VPTPAATVVDDEPDGSLIGSITIISDEEPECAGAGNCEEVVEDGLESSLG
RNGTVNVTDVTVTSTAAAADAGRRVLLFVADGDVADDSRRNRLLRGSRQL
QEEEEAAGNQTETEIEYESSPDQSSNLTEAQQAAEQINALAETGIADLLD
EMGLPPDTEVEIGVTKFVQLGTITDDAEDWDSIFSAALAGDRSISTAAYL
GFALALAILVLLACLCLCCCMLCLSKKDSRRRNAGVVRLEKVEESTAIND
DGNDEFELPTKRMSEIKEQRRGSSFMNRIPFFGSSAKMKAGETDIEAGTT
RRVAEDQIFAYPPHSSGGDSGKTQDAADASFPAPLGAPSGNDFFYATQRF
ADPQVNSPSPRASTGALAAGAAAATAATVAGRRRPAPAAAGPAPAPAGEV
SDEWPLPISTTTVGTGASGESGLSSSTISAVSAGSMETKHDVESDARASS
LSPAGRAGSSGAINRGDEAGATTAAATAGGVTAPAVVGAGAAVGAAAVTE
QKRDDESLEDIEARYMHE*
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