prot_Ecto-sp13_S_contig67171.17614.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig67171.17614.1
Unique Nameprot_Ecto-sp13_S_contig67171.17614.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length88
Homology
BLAST of mRNA_Ecto-sp13_S_contig67171.17614.1 vs. uniprot
Match: A0A6H5JAG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAG8_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 1.090e-47
Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 0
Query:    1 MVSRFMVMPLVAAMLLLSGAKAKLIPYDKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLTAVYLLSAVPIAFLLSAILQF 88
            MVSRFMVMPLVAAMLL SGAKAKLIPYDKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLTAVYLLSAVPIAFLLSAILQF
Sbjct:    1 MVSRFMVMPLVAAMLLFSGAKAKLIPYDKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLTAVYLLSAVPIAFLLSAILQF 88          
BLAST of mRNA_Ecto-sp13_S_contig67171.17614.1 vs. uniprot
Match: A0A7S2SS74_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS74_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.650e-17
Identity = 49/83 (59.04%), Postives = 63/83 (75.90%), Query Frame = 0
Query:    1 MVSRFMVMPLVAAMLLLSGAKAKLIPYDKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLTAVYLLSAVPIAFLLS 83
            MV+RF++ P+ A  +L   + A LIP D L+ FVLLM+ CMPSAQNSVVILQ+E K E A SMAKTL+ +Y+L+ +PIA LLS
Sbjct:  365 MVARFLITPVTAYGMLRVCSHAGLIPADPLLRFVLLMQACMPSAQNSVVILQLENKKEAAGSMAKTLSVLYILACLPIALLLS 447          
BLAST of mRNA_Ecto-sp13_S_contig67171.17614.1 vs. uniprot
Match: A0A0G4EKC6_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EKC6_VITBC)

HSP 1 Score: 80.9 bits (198), Expect = 6.560e-16
Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = 0
Query:    3 SRFMVMPLVAAMLLLSGAKAKLIPYDKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLTAVYLLSAVPIAFLLS 83
            +RF+  P +A  LL  G +  LI  D  +WFVLLM+GCMP+AQ SVVILQ+E +P+ A+ MAKTLT +Y L  +P+A L+S
Sbjct:  403 ARFVCAPTIAFTLLTIGRRLGLIMNDPFLWFVLLMQGCMPAAQQSVVILQLENQPQAATVMAKTLTLLYSLGVIPVALLIS 483          
BLAST of mRNA_Ecto-sp13_S_contig67171.17614.1 vs. uniprot
Match: D8LM59_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM59_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 3.900e-15
Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0
Query:    1 MVSRFMVMPLVAAMLLLSGAKAKLIPYDKLVWFVLLMEG 39
            MVSRFMVMPLVAAMLLLSGAKAKLIPYDKLVWFVLLMEG
Sbjct:   63 MVSRFMVMPLVAAMLLLSGAKAKLIPYDKLVWFVLLMEG 101          
BLAST of mRNA_Ecto-sp13_S_contig67171.17614.1 vs. uniprot
Match: A0A4D9D5S5_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5S5_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 2.750e-14
Identity = 40/89 (44.94%), Postives = 65/89 (73.03%), Query Frame = 0
Query:    1 MVSRFMVMPLVAAMLLLSGAKAKLIP-YDKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLTAVYLLSAVPIAFLLSAILQF 88
            M  RF +MP VA   + +G +  L+P  D L+ FV+L++GCMPSAQNSV+ILQ+E++P+ A+S+A+ ++ VY+LS +P+  L+  +L +
Sbjct:  369 MFQRFCIMPAVAFACVETGKRTGLLPTQDPLLLFVILLQGCMPSAQNSVLILQLERRPQAAASIARLISTVYILSILPVGMLIRTLLSY 457          
BLAST of mRNA_Ecto-sp13_S_contig67171.17614.1 vs. uniprot
Match: R1CQU2_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CQU2_EMIHU)

HSP 1 Score: 74.3 bits (181), Expect = 1.330e-13
Identity = 42/86 (48.84%), Postives = 63/86 (73.26%), Query Frame = 0
Query:    2 VSRFMVMPLVAAMLLLSGAKAKLIPYDKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLTAVYLLSAVPIAFLLSAILQ 87
            V+RF  +PL++  LL +  +A L+P D L   VLL++ CMPSAQNSV+ LQ++  PE A+ MA+ L A+YL++A+P+A +LS +LQ
Sbjct:  377 VARFCAVPLLSFALLHAALRAGLLPADPLRDLVLLLQSCMPSAQNSVLALQVDGSPERAARMARVLLAIYLIAALPVAGILSLLLQ 462          
BLAST of mRNA_Ecto-sp13_S_contig67171.17614.1 vs. uniprot
Match: A0A0G4EE60_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EE60_VITBC)

HSP 1 Score: 72.8 bits (177), Expect = 3.290e-13
Identity = 42/85 (49.41%), Postives = 58/85 (68.24%), Query Frame = 0
Query:    3 SRFMVMPLVAAMLLLSGAKAKLIPYDKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLTAVYLLSAVPIAFLLSAILQ 87
            +RF VMP +   ++    +  LI  D ++ F+LL+EGCMP AQN+VVILQ + + E A SMA+TL A+Y LS VP+ FL+S IL 
Sbjct:  242 ARFGVMPAITFAVVRLAQRTSLIQADPVLMFLLLLEGCMPPAQNTVVILQKQGQREEAESMAQTLAAIYALSLVPLPFLISCILD 326          
BLAST of mRNA_Ecto-sp13_S_contig67171.17614.1 vs. uniprot
Match: W7U1P2_9STRA (Membrane transporter n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1P2_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 4.650e-13
Identity = 43/87 (49.43%), Postives = 61/87 (70.11%), Query Frame = 0
Query:    3 SRFMVMPLVAAMLLLSGAKAKLIPY-DKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLTAVYLLSAVPIAFLLSAILQF 88
            +RF +MP  A +LL  G    LIP  D L+ FVLL++ CMP AQN+VVILQ++++P  A+SMA  ++ VYL + VP+  LLS +LQ+
Sbjct:  392 ARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVILQLQQRPAAAASMATLVSLVYLAAVVPMGLLLSFVLQY 478          
BLAST of mRNA_Ecto-sp13_S_contig67171.17614.1 vs. uniprot
Match: A0A7S2V2A0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2A0_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.050e-12
Identity = 42/84 (50.00%), Postives = 57/84 (67.86%), Query Frame = 0
Query:    4 RFMVMPLVAAMLLLSGAKAKLIPYDKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLTAVYLLSAVPIAFLLSAILQ 87
            RF++ PL+ A LL  G    L  +D ++ FVL+M+ CMPSAQN+V+ILQ+E     AS MA+ L  +YL+S VPI+ LLS  LQ
Sbjct:   62 RFVLTPLLTAGLLRLGINLGLSLHDPVLLFVLMMQSCMPSAQNNVLILQVEGLKHAASRMAQMLLIIYLISIVPISVLLSIFLQ 145          
BLAST of mRNA_Ecto-sp13_S_contig67171.17614.1 vs. uniprot
Match: A0A0G4FFE0_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FFE0_9ALVE)

HSP 1 Score: 71.2 bits (173), Expect = 1.600e-12
Identity = 43/87 (49.43%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    2 VSRFMVMPLVAAMLLLSGAKAKLIPYDKLVWFVLLMEGCMPSAQNSVVILQMEKKPELASSMAKTLTAVYLLSAVPIAFLLSAILQF 88
            V RFM+ PL+   L+LS  +  L+  D L+ F+LL++G MPSAQ SVV+LQ+E K + A  MAKTLT +Y L  +P+AF++S   QF
Sbjct:  366 VYRFMIAPLINLCLVLSLRRMGLLGEDPLLAFILLLQGVMPSAQQSVVMLQLEGKSDEAGRMAKTLTLLYSLGVLPMAFVISKAKQF 452          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig67171.17614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAG8_9PHAE1.090e-4798.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2SS74_9STRA2.650e-1759.04Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0G4EKC6_VITBC6.560e-1653.09Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
D8LM59_ECTSI3.900e-15100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4D9D5S5_9STRA2.750e-1444.94Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
R1CQU2_EMIHU1.330e-1348.84Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A0G4EE60_VITBC3.290e-1349.41Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
W7U1P2_9STRA4.650e-1349.43Membrane transporter n=3 Tax=Monodopsidaceae TaxID... [more]
A0A7S2V2A0_9STRA1.050e-1250.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A0G4FFE0_9ALVE1.600e-1249.43Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..88
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..86
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..62
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..51
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.847
NoneNo IPR availableTMHMMTMhelixcoord: 67..86
NoneNo IPR availableTMHMMTMhelixcoord: 30..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig67171contigEcto-sp13_S_contig67171:11..628 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig67171.17614.1mRNA_Ecto-sp13_S_contig67171.17614.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig67171 11..643 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig67171.17614.1 ID=prot_Ecto-sp13_S_contig67171.17614.1|Name=mRNA_Ecto-sp13_S_contig67171.17614.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=88bp
MVSRFMVMPLVAAMLLLSGAKAKLIPYDKLVWFVLLMEGCMPSAQNSVVI
LQMEKKPELASSMAKTLTAVYLLSAVPIAFLLSAILQF
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