prot_Ecto-sp13_S_contig671.17604.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig671.17604.1
Unique Nameprot_Ecto-sp13_S_contig671.17604.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length302
Homology
BLAST of mRNA_Ecto-sp13_S_contig671.17604.1 vs. uniprot
Match: A0A6H5JXF6_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF6_9PHAE)

HSP 1 Score: 268 bits (685), Expect = 1.010e-84
Identity = 142/193 (73.58%), Postives = 148/193 (76.68%), Query Frame = 0
Query:   42 HVNLPETFFVKGTMPDVALPRPQLLQAGFTMDQINNALHGWQLLSNAMVREIDQPLIGRWKSPREAMETLDAVYKPETQGEAQQLFHRFERYQVDVKVDPNVALRELDNIRDMIQECGGAALDDRFVFTRFVNALPQEYEVAKENLSYAAKLARGDLMRVTGTRYNTLCSQREAEKSHMRAAGQAFIAADGAG 234
            ++NLPETFF KGTMPDVALPRPQLLQAGFTMDQINNALHGWQLLSNAMV                                    FHRFERYQVDVKVDPNVALREL+NIRDMIQECGGAALDDRFVFTRFVNALPQEYEVAK NLS A +L RG+LMRVTGTRYNTLCSQREAEKSH RA  QAF+ ADGAG
Sbjct:   51 YMNLPETFFGKGTMPDVALPRPQLLQAGFTMDQINNALHGWQLLSNAMV------------------------------------FHRFERYQVDVKVDPNVALRELENIRDMIQECGGAALDDRFVFTRFVNALPQEYEVAKVNLSSAERLTRGNLMRVTGTRYNTLCSQREAEKSHTRAEEQAFVTADGAG 207          
BLAST of mRNA_Ecto-sp13_S_contig671.17604.1 vs. uniprot
Match: A0A6H5K9V8_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9V8_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 4.390e-74
Identity = 120/130 (92.31%), Postives = 122/130 (93.85%), Query Frame = 0
Query:  106 EAMETLDAVYKPETQGEAQQLFHRFERYQVDVKVDPNVALRELDNIRDMIQECGGAALDDRFVFTRFVNALPQEYEVAKENLSYAAKLARGDLMRVTGTRYNTLCSQREAEKSHMRAAGQAFIAADGAGK 235
            +AMETLDAVYKPETQGEAQQLFHRFERYQVDV VDPNVALREL+NIRDMIQECGGAALDDRFVFTRFVNALPQEYEVAKENLS A KL RGDLMRVTGTRYNTLCSQREAEKSH RAA QAF  ADGAGK
Sbjct:   18 DAMETLDAVYKPETQGEAQQLFHRFERYQVDVMVDPNVALRELENIRDMIQECGGAALDDRFVFTRFVNALPQEYEVAKENLSSAEKLTRGDLMRVTGTRYNTLCSQREAEKSHTRAAEQAFFTADGAGK 147          
BLAST of mRNA_Ecto-sp13_S_contig671.17604.1 vs. uniprot
Match: A0A6H5J624_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J624_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 8.190e-35
Identity = 76/194 (39.18%), Postives = 111/194 (57.22%), Query Frame = 0
Query:   43 VNLPETFFVKGTMPDVALPRPQLLQAGFTMDQINNALHGWQLLSNAMVREIDQPLIGRWKSPREAMETLDAVYKPETQGEAQQLFHRFERYQVDVKVDPNVALRELDNIRDMIQECGGAALDDRFVFTRFVNALPQ-EYEVAKENLSYAAKLARGDLMRVTGTRYNTLCSQREAEKSHMRAAGQAFIAADGAGK 235
            +++ + F   G +PD+  P+  LL+ GF+   I      W  LS A+  E D+ ++ R  +PREA+  LDA Y PETQG  QQLF  F++YQ   K +P  +L +L  +  M+Q+ GGA ++D+FVF R +++LP  EYEV K+ LS    L R  L++   TR+N L  +   E        QA+IA DG GK
Sbjct:   47 LDIGDVFSGGGVLPDINKPQTALLEQGFSYAAIRKTYLAWNFLSAALTTETDKAILRRCTNPREALRQLDAAYLPETQGAQQQLFREFQQYQTPRKENPVASLNKLMGMAIMMQQGGGATVNDQFVFARLIDSLPNPEYEVTKQTLSVVQPLTRDILVQQLSTRFNLLTEEWRKEGEKGSGGEQAYIAGDGTGK 240          
BLAST of mRNA_Ecto-sp13_S_contig671.17604.1 vs. uniprot
Match: A0A6H5JT13_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT13_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 6.790e-18
Identity = 43/48 (89.58%), Postives = 45/48 (93.75%), Query Frame = 0
Query:   42 HVNLPETFFVKGTMPDVALPRPQLLQAGFTMDQINNALHGWQLLSNAM 89
            ++NLPETFF K TMPDVALPRPQLLQAGFTMDQINNALHGWQL SNAM
Sbjct:  162 YMNLPETFFGKATMPDVALPRPQLLQAGFTMDQINNALHGWQLFSNAM 209          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig671.17604.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JXF6_9PHAE1.010e-8473.58CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K9V8_9PHAE4.390e-7492.31CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5J624_9PHAE8.190e-3539.18CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JT13_9PHAE6.790e-1889.58Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig671contigEcto-sp13_S_contig671:20119..21024 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig671.17604.1mRNA_Ecto-sp13_S_contig671.17604.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig671 20073..21345 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig671.17604.1 ID=prot_Ecto-sp13_S_contig671.17604.1|Name=mRNA_Ecto-sp13_S_contig671.17604.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=302bp
MGRDSGGVKEDYVVSRTRPAVQGRKASVPRVEDGLKPLHQLHVNLPETFF
VKGTMPDVALPRPQLLQAGFTMDQINNALHGWQLLSNAMVREIDQPLIGR
WKSPREAMETLDAVYKPETQGEAQQLFHRFERYQVDVKVDPNVALRELDN
IRDMIQECGGAALDDRFVFTRFVNALPQEYEVAKENLSYAAKLARGDLMR
VTGTRYNTLCSQREAEKSHMRAAGQAFIAADGAGKGEGRNRSAARETATA
KATATRAVGAGRRNGHASGASDAERWGIGLRNAQQRKATLSGARFARDSA
T*
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