prot_Ecto-sp13_S_contig6708.17599.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6708.17599.1
Unique Nameprot_Ecto-sp13_S_contig6708.17599.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length322
Homology
BLAST of mRNA_Ecto-sp13_S_contig6708.17599.1 vs. uniprot
Match: D8LTL8_ECTSI (TRUD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL8_ECTSI)

HSP 1 Score: 575 bits (1483), Expect = 1.980e-196
Identity = 295/322 (91.61%), Postives = 303/322 (94.10%), Query Frame = 0
Query:    1 MSGNNFSVVVRGAMVPGAAVKSSLEEACSNGFINFFGTQRVGSPLAAARGQPLPYQIGRHVLAGDWEAAAKKILHPRDNDPPFLHSALAEFLEGKITAKDCAARVRGRNRLSTERLVLHGLVRYGASAFQAAIQCVPFGMRTMWVHAYQSHVWNSLACARVRLLGSEAVPGDLILPAGDCAATEENGEMSPAFPGAVLAATEDSLPSSCAARAPAAREDGETEETCPGRRVDGLLSSATAAVGDGAKGSGREAGDGHTGRESAGSSSVASGRGRGLVTVLTSEAIQAFASEGVTPRDLLRRVVLPLAGTSIQYPLHQVGMIH 322
            +SGN FSVVVRG MVPGAAVKSSLEEACSNGFINF+GTQRVGSPLAAARGQPLPYQIGRHVLAGDWEAA KKIL PRDNDPPFLHSALAEF EGKITAKDCAARVRGRNRLSTERLVL GLVRYGASAFQAAIQCVPFGMRTMWVHAYQSHVWNSLACAR+RLLGSEAVPGDL+LPA  C ATEE GEMSPAF GAV A TEDSLPSSCAARAPAAREDGETEETCPGR V+GLLSS TAAVGDGAKGSG EAGDGHTGRESAGSSSVASGRGRGLVT LTSE IQAFASEGVTPRDLLRRVVLPLAGTSIQYPLHQ+G ++
Sbjct:  449 LSGNKFSVVVRGVMVPGAAVKSSLEEACSNGFINFYGTQRVGSPLAAARGQPLPYQIGRHVLAGDWEAAVKKILQPRDNDPPFLHSALAEFFEGKITAKDCAARVRGRNRLSTERLVLQGLVRYGASAFQAAIQCVPFGMRTMWVHAYQSHVWNSLACARIRLLGSEAVPGDLVLPADVCTATEEIGEMSPAFTGAVSAGTEDSLPSSCAARAPAAREDGETEETCPGRHVNGLLSSTTAAVGDGAKGSGHEAGDGHTGRESAGSSSVASGRGRGLVTALTSETIQAFASEGVTPRDLLRRVVLPLAGTSIQYPLHQIGSMY 770          
BLAST of mRNA_Ecto-sp13_S_contig6708.17599.1 vs. uniprot
Match: A0A662WDA6_9STRA (TRUD domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WDA6_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.580e-26
Identity = 74/192 (38.54%), Postives = 108/192 (56.25%), Query Frame = 0
Query:    3 GNNFSVVVR--------GAMVPGAAVKSSLEEACSNGFINFFGTQRVGSPLAAARGQPLPYQIGRHVLAGDWEAAAKKILHPRDNDPPFLHSALAEFLEGKITAKDCAARVRGRNRLSTERLVLHGLVRYGASAFQAAIQCVPFGMRTMWVHAYQSHVWNSLACARVRLLGSEAVPGDLILPAGDCAATEEN 186
            GN F++ +R              + +KS+LE     GF+N+FG QRVG P +A R    P+ IG  ++AG WE AA+ +L P D D      A   +LE +    + A ++   + +S ER VL GL R+GA AF+ A++ VPF  R M++HAYQS+++N +A  R+R  G++ V GDLI     C A  EN
Sbjct:  393 GNRFAITIRELSCKVESSTATIRSTLKSALESVKHRGFVNYFGFQRVGLPSSAVR----PHHIGEKIIAGKWEEAARLLLAPDDCDSEIGARAKRIYLETQDV--EAALKLMPFS-MSAERHVLQGLKRFGADAFEQAVKTVPFSRRVMFMHAYQSYLFNQMASFRLRHYGAKLVAGDLI----QCEAQGEN 573          
BLAST of mRNA_Ecto-sp13_S_contig6708.17599.1 vs. uniprot
Match: D0MQV6_PHYIT (Pseudouridylate synthase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MQV6_PHYIT)

HSP 1 Score: 116 bits (290), Expect = 2.150e-25
Identity = 69/181 (38.12%), Postives = 97/181 (53.59%), Query Frame = 0
Query:    2 SGNNFSVVVRGAMVPGAA----VKSSLEEACSN----GFINFFGTQRVGSPLAAARGQPLPYQIGRHVLAGDWEAAAKKILHPRDNDPPFLHSALAEFLEGKITAKDCAARVRGRNRLSTERLVLHGLVRYGASAFQAAIQCVPFGMRTMWVHAYQSHVWNSLACARVRLLGSEAVPGDLI 174
            +GN FS+V+R            ++SSLE A  N    GF+N+FG QRVG P    R     +QIG  ++AG WE A K IL   + D      A   +LE             G   +S ER +L GL R+G+ AF+  +Q +PF  R M++HAYQS+++N +A  R+R  G++ V GDLI
Sbjct:  282 NGNRFSIVLRRLSAESECTAEMIRSSLESALDNIKCHGFVNYFGFQRVGMPSKTVRA----HQIGAKIIAGKWEEALKLILTVHEGDSDDAAQAKRHYLESGDVEAALKLMPHG---MSVERQLLQGLKRFGSDAFEQVVQSIPFSRRVMYMHAYQSYLFNRMASYRLRQYGAKIVAGDLI 455          
BLAST of mRNA_Ecto-sp13_S_contig6708.17599.1 vs. uniprot
Match: A0A2D4CB79_PYTIN (TRUD domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CB79_PYTIN)

HSP 1 Score: 117 bits (292), Expect = 2.850e-25
Identity = 67/177 (37.85%), Postives = 93/177 (52.54%), Query Frame = 0
Query:    2 SGNNFSVVVRGAMVPGAAVKSSLEEACSN----GFINFFGTQRVGSPLAAARGQPLPYQIGRHVLAGDWEAAAKKILHPRDNDPPFLHSALAEFLEGKITAKDCAARVRGRNRLSTERLVLHGLVRYGASAFQAAIQCVPFGMRTMWVHAYQSHVWNSLACARVRLLGSEAVPGDLI 174
            SGN F + VRG          S+E         GFIN++G QRVG P +  R     + IG+ ++A  W  A   +L P   D P        + E  + A   AA   G   L  ER VL GL R+G+ AF+AA++C+P+  R M++HAYQS+V+N +A +RV  LG   V GDL+
Sbjct: 1540 SGNRFQITVRGVKSTETTDADSIEHRVKRLKEQGFINYYGFQRVGMPTSTVR----QHHIGQLLVARKWREAVNMLLKPTAQDSPECSRVKTAYHEEGVDAA-LAALSPGTRGLQVERAVLQGLKRFGSEAFEAAVRCIPYSRRLMYLHAYQSYVFNVMASSRVSRLGHRVVAGDLV 1711          
BLAST of mRNA_Ecto-sp13_S_contig6708.17599.1 vs. uniprot
Match: K3WGV5_GLOUD (TRUD domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGV5_GLOUD)

HSP 1 Score: 115 bits (289), Expect = 4.880e-25
Identity = 69/176 (39.20%), Postives = 99/176 (56.25%), Query Frame = 0
Query:    2 SGNNFSVVVRGAMVPG---AAVKSSLEEACSNGFINFFGTQRVGSPLAAARGQPLPYQIGRHVLAGDWEAAAKKILHPRDNDPPFLHSALAEFLEGKITAKDCAARVRGRNRLSTERLVLHGLVRYGASAFQAAIQCVPFGMRTMWVHAYQSHVWNSLACARVRLLGSEAVPGDLI 174
            SGN F++ ++         +A+   +      GFIN+FG QRVG P    R    P+ IG+ +LAG+WE A K I  P   +P  +  A   +LE   TA   AA  +  +R++ ER +L G  RYG  AF  AI  V F  R M++HAYQS+++N +A AR+RL G++ V GDL+
Sbjct:  364 SGNRFTISLQDVACESDAQSAISVGVVNVQRQGFINYFGFQRVGLPTNEVR----PHHIGQQILAGNWERAVKLIFIPSVKEPEAIAKAKRVYLE---TANVDAALGQMPSRMNLERSILQGFKRYGHDAFDRAIGNVSFSRRLMYMHAYQSYLFNRMASARLRLYGNKLVAGDLV 532          
BLAST of mRNA_Ecto-sp13_S_contig6708.17599.1 vs. uniprot
Match: A0A662WXV6_9STRA (TRUD domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WXV6_9STRA)

HSP 1 Score: 115 bits (289), Expect = 5.450e-25
Identity = 70/180 (38.89%), Postives = 105/180 (58.33%), Query Frame = 0
Query:    3 GNNFSVVVRG----AMVPGAAVKSSLEEACSN----GFINFFGTQRVGSPLAAARGQPLPYQIGRHVLAGDWEAAAKKILHPRDNDPPFLHSALAEFLEGKITAKDCAARVRGRNRLSTERLVLHGLVRYGASAFQAAIQCVPFGMRTMWVHAYQSHVWNSLACARVRLLGSEAVPGDLI 174
            GN F++ +R     A    A ++S+LE A  +    GF+N+FG QRVG P +A R    P+ IG  ++AG WE A + +L P   D      A   +LE +    + A ++   + +S ER VL GL R+GA AF+ A++ VPF  R M++HAYQS+++N +A  R+R  G++ V GDLI
Sbjct:  411 GNRFAITIRELSCKAETSTATIRSALESALESVKHRGFVNYFGFQRVGLPSSAVR----PHHIGEKIIAGKWEEATRLLLAPDGCDSEIGARAKRVYLETRDV--EAALKLMPFS-MSAERQVLQGLKRFGADAFEQAVKTVPFSRRVMFMHAYQSYLFNRMASFRLRHYGAKLVAGDLI 583          
BLAST of mRNA_Ecto-sp13_S_contig6708.17599.1 vs. uniprot
Match: A0A329SV24_9STRA (TRUD domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SV24_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.180e-24
Identity = 68/181 (37.57%), Postives = 99/181 (54.70%), Query Frame = 0
Query:    2 SGNNFSVVVRG----AMVPGAAVKSSLEEACSN----GFINFFGTQRVGSPLAAARGQPLPYQIGRHVLAGDWEAAAKKILHPRDNDPPFLHSALAEFLEGKITAKDCAARVRGRNRLSTERLVLHGLVRYGASAFQAAIQCVPFGMRTMWVHAYQSHVWNSLACARVRLLGSEAVPGDLI 174
            +GN FS+V+RG    A      ++SSL+ A  N    GF N+FG QRVG P    R     + IG  ++AG WE A + IL  ++ D   +  A   +LE             G   +S ER +L GL R+G+ AF+  +Q +PF  R M++HAYQS+++N +A  R+R  G++ V GDLI
Sbjct:  347 NGNRFSIVLRGLSSEAECTPEMIRSSLDSALDNIKRQGFANYFGFQRVGLPTKTVRA----HHIGEKIIAGKWEEALRLILTVQEGDSDDVAKAKQHYLESVDAEGALKLMPHG---MSVERQLLQGLKRFGSDAFEQVVQSIPFSRRVMYMHAYQSYLFNRIASYRLRQYGTKLVEGDLI 520          
BLAST of mRNA_Ecto-sp13_S_contig6708.17599.1 vs. uniprot
Match: UPI0009E433ED (pseudouridylate synthase 7 homolog n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E433ED)

HSP 1 Score: 110 bits (276), Expect = 2.650e-23
Identity = 65/190 (34.21%), Postives = 103/190 (54.21%), Query Frame = 0
Query:    1 MSGNNFSVVVRGAMVPGAAVKSSLEEACSNGFINFFGTQRVGSPLAAARGQPLPYQIGRHVLAGDWEAAAKKILHPRDNDPPFLHSALAEFLEGKITAKDCAARVRGRNRLSTERLVLHGLVRYGASAFQAAIQCVPFGMRTMWVHAYQSHVWNSLACARVRLLGSEAVPGDLILPAGDCAATEENGEMS 190
            +SGN+F + +R  +     +  SLE    NGFIN+FG QR G+           ++IGR +L  +W  A   +L PRD +P  L +A  ++ +    AK    R+  R  + ++  +L GLVR+G S    A+Q +    R M+VHAYQS+VWNS+A  R++  G + + GDL++ +   AA   + + S
Sbjct:  349 LSGNHFIITLRNVVGDHDKITESLESLKVNGFINYFGLQRFGTTSVPT------HKIGRALLLSNWSEAIDLLLAPRDGEPDDLKAA-RQYWKDTNDAKGTLKRMPKRKCIESD--LLQGLVRHGPSGLVNALQAISRNTRLMYVHAYQSYVWNSMASRRIKEYGLQPIKGDLVVASKSSAACSTDTDES 529          
BLAST of mRNA_Ecto-sp13_S_contig6708.17599.1 vs. uniprot
Match: M4B463_HYAAE (TRUD domain-containing protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B463_HYAAE)

HSP 1 Score: 110 bits (275), Expect = 3.050e-23
Identity = 72/182 (39.56%), Postives = 100/182 (54.95%), Query Frame = 0
Query:    2 SGNNFSVVVRGAM----VPGAAVKSSLEEACSN----GFINFFGTQRVGSPLAAARGQPLPYQIGRHVLAGDWEAAAKKILHPRDNDPPFLHSALAEFLE-GKITAKDCAARVRGRNRLSTERLVLHGLVRYGASAFQAAIQCVPFGMRTMWVHAYQSHVWNSLACARVRLLGSEAVPGDLI 174
            +GN F++VV G       P   ++S LE A  N    GF N+FG QRVG P    R     + IG  ++A  WE A + IL  R  +      A   +LE G I A   A ++     +S ER VL GL RYG+ AF+ A+Q +PF  R M++HAYQS+++N +A  R+R  G++ V GDLI
Sbjct:  320 NGNRFAIVVWGLSSDTHCPAEMIRSILESALKNIEYHGFANYFGFQRVGLPTNTVRA----HHIGEKMIASKWEEALRLILAVRPAESEDAAKAKRHYLESGDIEA---ALKLMPLG-MSVERQVLQGLKRYGSDAFEQAVQSIPFSRRMMYMHAYQSYIFNRVASFRLRHYGTKVVEGDLI 493          
BLAST of mRNA_Ecto-sp13_S_contig6708.17599.1 vs. uniprot
Match: A0A6A3MJS7_9STRA (TRUD domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MJS7_9STRA)

HSP 1 Score: 110 bits (275), Expect = 3.400e-23
Identity = 69/181 (38.12%), Postives = 98/181 (54.14%), Query Frame = 0
Query:    2 SGNNFSVVVRGA---MVPGA-AVKSSLEEACSN----GFINFFGTQRVGSPLAAARGQPLPYQIGRHVLAGDWEAAAKKILHPRDNDPPFLHSALAEFLEGKITAKDCAARVRGRNRLSTERLVLHGLVRYGASAFQAAIQCVPFGMRTMWVHAYQSHVWNSLACARVRLLGSEAVPGDLI 174
            SGN FS+V+RG    M P +  ++S+LE A  N    GF N+FG QRVG P    R     + IG  ++A  WE A + IL  +D+D      A   +LE +           G   +S ER VL GL R+G+ AF+ A+  V F  R M++HAYQS+++N +   R+   G++ V GDLI
Sbjct:  356 SGNRFSIVIRGLSDEMEPSSKTIQSTLESALENIKHQGFANYFGFQRVGLPTNTVRA----HHIGEKIIASKWEEALRLILAAQDSDSEDGAKAKQLYLESRDVEAALKLMPHG---MSVERQVLQGLKRFGSDAFEQAVLSVSFSRRAMYMHAYQSYLFNRIVSLRLHKYGNKVVEGDLI 529          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6708.17599.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTL8_ECTSI1.980e-19691.61TRUD domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A662WDA6_9STRA2.580e-2638.54TRUD domain-containing protein n=1 Tax=Nothophytop... [more]
D0MQV6_PHYIT2.150e-2538.12Pseudouridylate synthase, putative n=2 Tax=Phytoph... [more]
A0A2D4CB79_PYTIN2.850e-2537.85TRUD domain-containing protein n=1 Tax=Pythium ins... [more]
K3WGV5_GLOUD4.880e-2539.20TRUD domain-containing protein n=1 Tax=Globisporan... [more]
A0A662WXV6_9STRA5.450e-2538.89TRUD domain-containing protein n=1 Tax=Nothophytop... [more]
A0A329SV24_9STRA1.180e-2437.57TRUD domain-containing protein n=2 Tax=Phytophthor... [more]
UPI0009E433ED2.650e-2334.21pseudouridylate synthase 7 homolog n=1 Tax=Orbicel... [more]
M4B463_HYAAE3.050e-2339.56TRUD domain-containing protein n=2 Tax=Hyaloperono... [more]
A0A6A3MJS7_9STRA3.400e-2338.12TRUD domain-containing protein n=5 Tax=Phytophthor... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042214Pseudouridine synthase, TruD, catalytic domainGENE3D3.30.2350.20coord: 119..209
e-value: 2.0E-6
score: 29.4
IPR042214Pseudouridine synthase, TruD, catalytic domainGENE3D3.30.2350.20coord: 1..52
e-value: 4.2E-8
score: 34.3
IPR001656Pseudouridine synthase, TruDPFAMPF01142TruDcoord: 2..180
e-value: 2.3E-24
score: 86.0
IPR001656Pseudouridine synthase, TruDPANTHERPTHR13326TRNA PSEUDOURIDINE SYNTHASE Dcoord: 2..319
IPR011760Pseudouridine synthase, TruD, insertion domainPROSITEPS50984TRUDcoord: 31..265
score: 14.959
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 2..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6708contigEcto-sp13_S_contig6708:4746..7242 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6708.17599.1mRNA_Ecto-sp13_S_contig6708.17599.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6708 4746..7242 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6708.17599.1 ID=prot_Ecto-sp13_S_contig6708.17599.1|Name=mRNA_Ecto-sp13_S_contig6708.17599.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=322bp
MSGNNFSVVVRGAMVPGAAVKSSLEEACSNGFINFFGTQRVGSPLAAARG
QPLPYQIGRHVLAGDWEAAAKKILHPRDNDPPFLHSALAEFLEGKITAKD
CAARVRGRNRLSTERLVLHGLVRYGASAFQAAIQCVPFGMRTMWVHAYQS
HVWNSLACARVRLLGSEAVPGDLILPAGDCAATEENGEMSPAFPGAVLAA
TEDSLPSSCAARAPAAREDGETEETCPGRRVDGLLSSATAAVGDGAKGSG
REAGDGHTGRESAGSSSVASGRGRGLVTVLTSEAIQAFASEGVTPRDLLR
RVVLPLAGTSIQYPLHQVGMIH
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042214TruD_catalytic
IPR001656PsdUridine_synth_TruD
IPR011760PsdUridine_synth_TruD_insert
IPR020103PsdUridine_synth_cat_dom_sf