mRNA_Ecto-sp13_S_contig6705.17597.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6705.17597.1
Unique NamemRNA_Ecto-sp13_S_contig6705.17597.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6705.17597.1 vs. uniprot
Match: A0A6H5K7K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K3_9PHAE)

HSP 1 Score: 1090 bits (2818), Expect = 0.000e+0
Identity = 603/676 (89.20%), Postives = 612/676 (90.53%), Query Frame = 1
Query:    1 ETWESDVMESESDVGGSEEEDYGKAFDLADDXXXXXXXXXXXXXSDGEYVIPIRPIRKVKRKNGRKYYPPSEFVPADVGPDGKVVVPVKAELSFKETTEERRKREAEXXXXXLERKEFMENFRKAREEEDANRAVKTAKKQXXDDVAKEDARRKEEKLGRVFAGEGDVMEEYERDKVEQDALQQLLQDSMKKKELKPVDHSKISYINLRKNLYIVPKALAMASEEKKENDRLELEIKVRGKGCPPVLHSWEQCGFSDRVLAVIRRNNFE--------------------------------------------PVLGEGEGPIGLIMAPARELAVQIYNEARKFTKALGLRVTAVYGGAGVADQIADLKRGAEIVVCTPGRMIDILTMQAGKLVSLDRVSFVVLDEADRMFDMGFEPQIKMILQNVRPDRQTALFSATFPRTVETLAKRVLKMPLEIIVGGRSIASSDITQHVEIRDDDDKFMRLLQLLGVWYEKGNILVFVDTQSKCDTLFQDLSRAGYHGLSLHGGKDQTDRDFTIADFKNKSATLMVATSVAGRGLDVPDLVCVINYSCPNHLEDYVHRVGRTXXXXXKGTAYTFISAEEEKHAPTLIKALTQSKQKIPPELVQMAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQMRSLEKRQYEI 1896
            ETWESDVMESESDVGGSEEEDYGKAFDLADD XXXXXXXX    SDGEYVIPIRPIRKVKRKNGRKYYPPSEFVPADVGPDGKVVVP KAE SFKET EERRKRE  XXXXXLERKEFMENFRKAREEE+ANRAVK    Q   +VA+EDARRKEEKLGR+FAGEGD+MEEYERDKVEQDALQ LLQDSMKKKELKPVDHSKISYIN+RKNLYI+PK LAMASEEKKENDRLEL+IKVRGKGCPPVLHSWEQCGFSDRVLAVIRRNNFE                                            PVLGEGEGPIGLIMAPARELAVQIYNEARKFTKALGLRVTAVYGGAGVADQIADLKRGAEIVVCTPGRMIDILTMQAGKLV LDRVSFVVLDEADRMFDMGFEPQIKMILQNVRPDRQTALFSATFPRTVETLAKRVLKMPLEIIVGGRSIASSDITQHVEIRDDDDKFMRLLQLLGVWYEKGNILVFVDTQSKCDTLFQDLSRAGYHGLSLHGGKDQTDRDFTIADFKNKSATLMVATSVAGRGLDVPDLVCVINYSCPNHLEDYVHRVGRTXXXXXKGTAYTFISAEEEKHAPTLIKALTQSKQKIPPELV+MAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQMRSLEKRQYEI
Sbjct:  324 ETWESDVMESESDVGGSEEEDYGKAFDLADDDXXXXXXXXETEPSDGEYVIPIRPIRKVKRKNGRKYYPPSEFVPADVGPDGKVVVPAKAESSFKETAEERRKREXXXXXXXLERKEFMENFRKAREEEEANRAVKXXXXQQEHEVAEEDARRKEEKLGRMFAGEGDIMEEYERDKVEQDALQ-LLQDSMKKKELKPVDHSKISYINVRKNLYIIPKVLAMASEEKKENDRLELDIKVRGKGCPPVLHSWEQCGFSDRVLAVIRRNNFEKPFAIQKQAMPALMSGRDVIGVASTGSGKTLAFLLPLLRHIFDQPVLGEGEGPIGLIMAPARELAVQIYNEARKFTKALGLRVTAVYGGAGVADQIADLKRGAEIVVCTPGRMIDILTMQAGKLVCLDRVSFVVLDEADRMFDMGFEPQIKMILQNVRPDRQTALFSATFPRTVETLAKRVLKMPLEIIVGGRSIASSDITQHVEIRDDDDKFMRLLQLLGVWYEKGNILVFVDTQSKCDTLFQDLSRAGYHGLSLHGGKDQTDRDFTIADFKNKSATLMVATSVAGRGLDVPDLVCVINYSCPNHLEDYVHRVGRTXXXXXKGTAYTFISAEEEKHAPTLIKALTQSKQKIPPELVKMAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQMRSLEKRQYEI 998          
BLAST of mRNA_Ecto-sp13_S_contig6705.17597.1 vs. uniprot
Match: D8LJ88_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ88_ECTSI)

HSP 1 Score: 1080 bits (2793), Expect = 0.000e+0
Identity = 594/632 (93.99%), Postives = 598/632 (94.62%), Query Frame = 1
Query:    1 ETWESDVMESESDVGGSEEEDYGKAFDLADDXXXXXXXXXXXXXSDGEYVIPIRPIRKVKRKNGRKYYPPSEFVPADVGPDGKVVVPVKAELSFKETTEERRKREAEXXXXXLERKEFMENFRKAREEEDANRAVKTAKKQXXDDVAKEDARRKEEKLGRVFAGEGDVMEEYERDKVEQDALQQLLQDSMKKKELKPVDHSKISYINLRKNLYIVPKALAMASEEKKENDRLELEIKVRGKGCPPVLHSWEQCGFSDRVLAVIRRNNFEPVLGEGEGPIGLIMAPARELAVQIYNEARKFTKALGLRVTAVYGGAGVADQIADLKRGAEIVVCTPGRMIDILTMQAGKLVSLDRVSFVVLDEADRMFDMGFEPQIKMILQNVRPDRQTALFSATFPRTVETLAKRVLKMPLEIIVGGRSIASSDITQHVEIRDDDDKFMRLLQLLGVWYEKGNILVFVDTQSKCDTLFQDLSRAGYHGLSLHGGKDQTDRDFTIADFKNKSATLMVATSVAGRGLDVPDLVCVINYSCPNHLEDYVHRVGRTXXXXXKGTAYTFISAEEEKHAPTLIKALTQSKQKIPPELVQMAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQMRSLEKRQYEI 1896
            ETWESDVMESESDVGGSEEEDYGKAFDLADD XXXXXXXX    SDGEYVIPIRPIRKVKRKNGRKYYPPSEFVPADVGPDGKVVVPVKAE SFKET EERRK    XXXXX      MENFRKAR               X DDVA+EDARRKEEKLGRVFAGEGDVMEEYERDKVEQDALQ LLQDSMKKKELKPVDHSKISYI+LRKNLYI+PKALAMASEEKKENDRLELEIKVRGKGCPPVLHSWEQCGFSDRVLAVIRRNNFEPVLGEGEGPIGLIMAPARELAVQIYNEARKFTKALGLRVTAVYGGAGVADQIADLKRGAEIVVCTPGRMIDILTMQAGKLVSLDRVSFVVLDEADRMFDMGFEPQIKMILQNVRPDRQTALFSATFPRTVETLAKRVLKMPLEIIVGGRSIASSDITQHVEIRDDDDKFMRLLQLLGVWYEKGNILVFVDTQSKCDTLFQDLSRAGYHGLSLHGGKDQTDRDFTIADFKNKSATLMVATSVAGRGLDVPDLVCVINYSCPNHLEDYVHRVGRTXXXXXKGTAYTFISAEEEKHAPTLIKALTQSKQKIPPELV+MAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQMRSLEKRQYEI
Sbjct:  490 ETWESDVMESESDVGGSEEEDYGKAFDLADDDXXXXXXXXETEPSDGEYVIPIRPIRKVKRKNGRKYYPPSEFVPADVGPDGKVVVPVKAESSFKETAEERRKXXXXXXXXXXXXXXXMENFRKARXXXXXXXXXXXXXXXXEDDVAEEDARRKEEKLGRVFAGEGDVMEEYERDKVEQDALQ-LLQDSMKKKELKPVDHSKISYISLRKNLYIIPKALAMASEEKKENDRLELEIKVRGKGCPPVLHSWEQCGFSDRVLAVIRRNNFEPVLGEGEGPIGLIMAPARELAVQIYNEARKFTKALGLRVTAVYGGAGVADQIADLKRGAEIVVCTPGRMIDILTMQAGKLVSLDRVSFVVLDEADRMFDMGFEPQIKMILQNVRPDRQTALFSATFPRTVETLAKRVLKMPLEIIVGGRSIASSDITQHVEIRDDDDKFMRLLQLLGVWYEKGNILVFVDTQSKCDTLFQDLSRAGYHGLSLHGGKDQTDRDFTIADFKNKSATLMVATSVAGRGLDVPDLVCVINYSCPNHLEDYVHRVGRTXXXXXKGTAYTFISAEEEKHAPTLIKALTQSKQKIPPELVKMAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQMRSLEKRQYEI 1120          
BLAST of mRNA_Ecto-sp13_S_contig6705.17597.1 vs. uniprot
Match: A0A835YQB2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQB2_9STRA)

HSP 1 Score: 688 bits (1776), Expect = 1.180e-238
Identity = 371/530 (70.00%), Postives = 422/530 (79.62%), Query Frame = 1
Query:  439 AKEDARRKEEKLGRVFAGEGDVMEEYERDKVEQDALQQLLQDSMKKKELKPVDHSKISYINLRKNLYIVPKALAMASEEKKENDRLELEIKVRGKGCPPVLHSWEQCGFSDRVLAVIRRNNF--------------------------------------------EPVLGEGEGPIGLIMAPARELAVQIYNEARKFTKALGLRVTAVYGGAGVADQIADLKRGAEIVVCTPGRMIDILTMQAGKLVSLDRVSFVVLDEADRMFDMGFEPQIKMILQNVRPDRQTALFSATFPRTVETLAKRVLKMPLEIIVGGRSIASSDITQHVEIRDDDDKFMRLLQLLGVWYEKGNILVFVDTQSKCDTLFQDLSRAGYHGLSLHGGKDQTDRDFTIADFKNKSATLMVATSVAGRGLDVPDLVCVINYSCPNHLEDYVHRVGRTXXXXXKGTAYTFISAEEEKHAPTLIKALTQSKQKIPPELVQMAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQMRSLEKRQYEI 1896
            A+E   R  E+LGR++A EGD+M+E ER   E+DAL  +L + MKKKELKPVDH+ I Y+ +RKNLYIVP+ALA  + E+ +  R  LEIK+RGKGCPP + +WEQCG  DRVLAVI R  F                                            +P LGEGEGPIGLIMAPARELAVQIY EA+KFTKALGLRVTAVYGGA VADQI DLKRGAEIVVCTPGRMIDILTMQAGKLVSL RVSFVV+DEADRMFDMGFEPQI+MILQNVRPDRQTALFSATFP  VE LA++VL+ PLEIIVGGRS+AS  ITQHVE+R++DDK+MRLLQLLGVWYE+GN+LVFVDTQ K D+LFQDL+R+GY  LSLHGGKDQTDRDFTI+DFK+K+ TLMVATSVAGRGLDVPDLVCVINYSCPNHLEDYVHRVGR XXXXX  TAYTFI+ EEE HAPTL+KAL  + Q +PPEL  MA+ F  KV SG ARKA+SGFSGKGFTFDD+EQ+++Q++RSLEKRQYEI
Sbjct:   21 AEEARARDAERLGRMWASEGDIMDEGERAGKEKDALA-VLAEQMKKKELKPVDHAAIDYLPIRKNLYIVPRALAALTSEQVQAARAALEIKIRGKGCPPPVETWEQCGLRDRVLAVITRLGFGAPFAIQRQALPALMSGRDVIGVARTGSGKTLAFLLPLFRHILDQPPLGEGEGPIGLIMAPARELAVQIYTEAKKFTKALGLRVTAVYGGAMVADQIGDLKRGAEIVVCTPGRMIDILTMQAGKLVSLARVSFVVMDEADRMFDMGFEPQIRMILQNVRPDRQTALFSATFPPKVEALARKVLRAPLEIIVGGRSVASESITQHVEVREEDDKYMRLLQLLGVWYERGNVLVFVDTQQKADSLFQDLTRSGYPALSLHGGKDQTDRDFTISDFKSKARTLMVATSVAGRGLDVPDLVCVINYSCPNHLEDYVHRVGRXXXXXXXXTAYTFIAPEEEAHAPTLVKALQAANQPVPPELAAMADAFGAKVASGLARKANSGFSGKGFTFDDAEQTDAQKIRSLEKRQYEI 549          
BLAST of mRNA_Ecto-sp13_S_contig6705.17597.1 vs. uniprot
Match: A0A7S2MCY9_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MCY9_9STRA)

HSP 1 Score: 651 bits (1679), Expect = 1.780e-218
Identity = 339/525 (64.57%), Postives = 413/525 (78.67%), Query Frame = 1
Query:  472 LGRVFAGEGDVMEEYERDKVEQDALQQLLQDSMKKKELKPVDHSKISYINLRKNLYIVPKALA--MASEEKKEND--RLELEIKVRGKGCPPVLHSWEQCGFSDRVLA----------------------------------------------VIRRNNFEPVLGEGEGPIGLIMAPARELAVQIYNEARKFTKALGLRVTAVYGGAGVADQIADLKRGAEIVVCTPGRMIDILTMQAGKLVSLDRVSFVVLDEADRMFDMGFEPQIKMILQNVRPDRQTALFSATFPRTVETLAKRVLKMPLEIIVGGRSIASSDITQHVEIRDDDDKFMRLLQLLGVWYEKGNILVFVDTQSKCDTLFQDLSRAGYHGLSLHGGKDQTDRDFTIADFKNKSATLMVATSVAGRGLDVPDLVCVINYSCPNHLEDYVHRVGRTXXXXXKGTAYTFISAEEEKHAPTLIKALTQSKQKIPPELVQMAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQMRSLEKRQYEI 1896
            LGR++A EGDVMEE+ER+  E++AL+ +LQ++M+KKEL PVDH+ + YI +RKN+YI+PKALA  +  E  KE +  R +LEIK+RG+GCPP + +W  CG SDRVLA                                              + R    +PVLGEGEGPIGLI+APARELAVQIYNEA+KFTK+LGLRVTA+YGGAGVA+QI ++KRG++IVVCTPGRMIDILTMQAGKLVSL RVSFVV+DEADRMFDMGFEPQI+MILQNVRPDRQT LFSATFP  V+ LAK+ LK P+EI+VGGRS+A++ ITQH E+RD+DDKFMRLLQLLGVW+E+G++LVFVDTQ +CD +F+DL R+GY  LSLHGGKDQ DRD TIADFKNK  TLMVATSVAGRGLDVPDLVCV+NYSCPNH+EDYVHRVGRT     KGTAYTFIS +EE++AP L+KALTQ+KQ+IP  L +MA+ F+ K+D+G AR ASSGF G GFTFD+SE++E Q++  +++RQYEI
Sbjct:  453 LGRMWASEGDVMEEHERNNEEENALE-MLQEAMRKKELAPVDHTLVDYIPIRKNMYILPKALAHLLKPENAKELNAKREDLEIKIRGRGCPPPVDTWAHCGISDRVLAQLTRVYGPDSAPFAVQKQAIPAIMSGRDIIGIAKTGSGKTLAFLLPMFRHILDQPVLGEGEGPIGLILAPARELAVQIYNEAKKFTKSLGLRVTAIYGGAGVAEQIGEMKRGSDIVVCTPGRMIDILTMQAGKLVSLRRVSFVVMDEADRMFDMGFEPQIRMILQNVRPDRQTCLFSATFPDKVQNLAKKSLKAPVEIVVGGRSVANAAITQHAEVRDEDDKFMRLLQLLGVWFERGHVLVFVDTQQRCDRIFEDLMRSGYPCLSLHGGKDQHDRDQTIADFKNKVCTLMVATSVAGRGLDVPDLVCVVNYSCPNHIEDYVHRVGRTGRAGKKGTAYTFISKDEEQYAPLLVKALTQAKQEIPTPLQEMADAFRKKIDAGDARWASSGFGGSGFTFDNSEKNEVQRLADMQRRQYEI 976          
BLAST of mRNA_Ecto-sp13_S_contig6705.17597.1 vs. uniprot
Match: A0A7S2WWQ9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWQ9_9STRA)

HSP 1 Score: 624 bits (1609), Expect = 4.210e-207
Identity = 331/525 (63.05%), Postives = 405/525 (77.14%), Query Frame = 1
Query:  472 LGRVFAGEGDVMEEYERDKVEQDALQQLLQDSMKKKELKPVDHSKISYINLRKNLYIVPKALA----MASEEKKENDRLELEIKVRGKGCPPVLHSWEQCGFSDRVLAVIRRNNFE----------------------------------------------PVLGEGEGPIGLIMAPARELAVQIYNEARKFTKALGLRVTAVYGGAGVADQIADLKRGAEIVVCTPGRMIDILTMQAGKLVSLDRVSFVVLDEADRMFDMGFEPQIKMILQNVRPDRQTALFSATFPRTVETLAKRVLKMPLEIIVGGRSIASSDITQHVEIRDDDDKFMRLLQLLGVWYEKGNILVFVDTQSKCDTLFQDLSRAGYHGLSLHGGKDQTDRDFTIADFKNKSATLMVATSVAGRGLDVPDLVCVINYSCPNHLEDYVHRVGRTXXXXXKGTAYTFISAEEEKHAPTLIKALTQSKQKIPPELVQMAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQMRSLEKRQYEI 1896
            LGR+F  +GDVMEE+ER+  E+ AL+  LQ+++KKKEL PVDH+ I YI++RKNLYIVP+ LA    + + ++    R +LEIKVRG+GCPP + +W+QCG  DRVL  +R+   E                                              P LGEGEGP+GLIMAPARELAVQIY EARKFTKAL LRVTA+YGGAGV +QI ++KRGAEIVVCTPGRMIDILTMQAGKLVSL RVS +VLDEADRMFDMGFEPQI+MILQN+RPDRQT LFSATFP  VE LAK+VL +PLEI+VGGRS+A+S ITQ+ E+R++DDKFMRLLQLLGVW+E+G+ILVFVDTQ +CD LF+DL R GY  LSLHGGKDQ DR+ TI+D+K+K  TLMVATSVAGRGLDVP+L CV+NYSCPNHLEDYVHRVGRTXXXXX GTAYTFI+ EE++ AP L+KALTQ++Q++P  L  M+E+F+ K+ SGQAR A SG+ G GF FD +E++E+Q++  +++RQYEI
Sbjct:  531 LGRIFGDDGDVMEEHEREDQEKSALE-TLQEALKKKELAPVDHTLIDYISVRKNLYIVPRVLAPLARLENAKQLAELREKLEIKVRGRGCPPPVETWDQCGLPDRVLKQLRKVLGEDSTPFAVQKQAIPAIMSGRDVIGIAKTGSGKTLAFLLPMIRHILDQPPLGEGEGPVGLIMAPARELAVQIYKEARKFTKALALRVTAIYGGAGVKEQIGEMKRGAEIVVCTPGRMIDILTMQAGKLVSLSRVSTIVLDEADRMFDMGFEPQIRMILQNIRPDRQTCLFSATFPPKVEALAKKVLSVPLEIVVGGRSVANSSITQYAEVRNEDDKFMRLLQLLGVWFERGHILVFVDTQQRCDRLFEDLLRHGYPCLSLHGGKDQIDREQTISDYKSKVCTLMVATSVAGRGLDVPELCCVVNYSCPNHLEDYVHRVGRTXXXXXXGTAYTFITPEEDQFAPLLVKALTQAEQEVPKALEDMSEQFKAKIASGQARWAGSGYGGSGFKFDHTEKNEAQKLADMQRRQYEI 1054          
BLAST of mRNA_Ecto-sp13_S_contig6705.17597.1 vs. uniprot
Match: W7TCV9_9STRA (Dead-box atp-dependent rna helicase 42-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCV9_9STRA)

HSP 1 Score: 606 bits (1563), Expect = 6.150e-204
Identity = 328/526 (62.36%), Postives = 398/526 (75.67%), Query Frame = 1
Query:  469 KLGRVFAGEGDVMEEYERDKVE--QDALQQLLQDSMKKKELKPVDHSKISYINLRKNLYIVPKALAMASEEKKENDRLELEIKVRGKGCPPVLHSWEQCGFSDRVLAVIRRNNF-EPV----------------------------------------------LGEGEGPIGLIMAPARELAVQIYNEARKFTKALGLRVTAVYGGAGVADQIADLKRGAEIVVCTPGRMIDILTMQAGKLVSLDRVSFVVLDEADRMFDMGFEPQIKMILQNVRPDRQTALFSATFPRTVETLAKRVLKMPLEIIVGGRSIASSDITQHVEIRDD-DDKFMRLLQLLGVWYEKGNILVFVDTQSKCDTLFQDLSRAGYHGLSLHGGKDQTDRDFTIADFKNKSATLMVATSVAGRGLDVPDLVCVINYSCPNHLEDYVHRVGRTXXXXXKGTAYTFISAEEEKHAPTLIKALTQSKQKIPPELVQMAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQMRSLEKRQYEI 1896
            +LGR+F  +GD+ EE E    E  + AL+ +LQ+ +KKKELKPVDH+++ Y+ +RK LYIVP+AL   S+ +    R  LEIKVRGKGCP  L +WEQ G  DRVL ++R+    EP                                               LGEGEGPIG++MAPARELAVQI+ EA+KF + LGLR  AVYGGAG+ DQI +LKRGA IVVCTPGRMIDILTMQAGKL+SL RVSFVV+DEADRMFDMGFEPQIKMIL N+RPDRQT LFSATFP+ VE+LA++VL  PLEI+VGGRS+AS  ITQ+VE+R++ ++K+MRLLQLLGVWYEKGN+L+FVDTQ KCD LF DL R+GY  LSLHGG DQ DRD TI DFK+++ TLMVATSVAGRGLDVP+L CVINY+CPNHLEDYVHRVGR XXXXX GTAYTF+++EEE++AP L+KALTQSKQ++PPEL  MAE FQ KV +G A  A SGF GKGFTF+DSEQ+++Q+  +L+K+QY+I
Sbjct:  135 RLGRLFQSDGDLEEEDEEGPREGPKTALE-ILQEQVKKKELKPVDHARVDYLPIRKKLYIVPRALHGHSDAELNRRREALEIKVRGKGCPAPLETWEQSGLPDRVLGLLRKYKLAEPFPIQRQALPAIMAGRDIIGVAKTGSGKTLAFLLPMLRHILDQEASFPLGEGEGPIGMVMAPARELAVQIHTEAKKFCRPLGLRCVAVYGGAGIGDQIGELKRGAHIVVCTPGRMIDILTMQAGKLMSLSRVSFVVMDEADRMFDMGFEPQIKMILTNIRPDRQTVLFSATFPKQVESLARKVLAFPLEILVGGRSVASDAITQYVEVREEGEEKYMRLLQLLGVWYEKGNVLIFVDTQQKCDNLFADLMRSGYPCLSLHGGMDQMDRDSTIHDFKSRARTLMVATSVAGRGLDVPELCCVINYACPNHLEDYVHRVGRXXXXXXXGTAYTFLTSEEEQYAPLLLKALTQSKQEVPPELRAMAEAFQQKVTAGTAHWAGSGFGGKGFTFEDSEQTDAQRTAALQKKQYQI 659          
BLAST of mRNA_Ecto-sp13_S_contig6705.17597.1 vs. uniprot
Match: A0A4D9CQL0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQL0_9STRA)

HSP 1 Score: 602 bits (1552), Expect = 9.440e-198
Identity = 326/526 (61.98%), Postives = 397/526 (75.48%), Query Frame = 1
Query:  469 KLGRVFAGEGDVMEEYERDKVE--QDALQQLLQDSMKKKELKPVDHSKISYINLRKNLYIVPKALAMASEEKKENDRLELEIKVRGKGCPPVLHSWEQCGFSDRVLAVIRRNNF-EPV----------------------------------------------LGEGEGPIGLIMAPARELAVQIYNEARKFTKALGLRVTAVYGGAGVADQIADLKRGAEIVVCTPGRMIDILTMQAGKLVSLDRVSFVVLDEADRMFDMGFEPQIKMILQNVRPDRQTALFSATFPRTVETLAKRVLKMPLEIIVGGRSIASSDITQHVEIRDD-DDKFMRLLQLLGVWYEKGNILVFVDTQSKCDTLFQDLSRAGYHGLSLHGGKDQTDRDFTIADFKNKSATLMVATSVAGRGLDVPDLVCVINYSCPNHLEDYVHRVGRTXXXXXKGTAYTFISAEEEKHAPTLIKALTQSKQKIPPELVQMAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQMRSLEKRQYEI 1896
            +LGR+F  +GD+ EE E    E  + AL+ +LQ+ +KKKELK VDH+++ Y+ +RK LYIVP+AL   S+ +    R  LEIKVRGKGCP  L +WEQ G  DRVL ++R+    EP                                               LGEGEGPIG++MAPARELAVQI+ EA+KF + LGLR  AVYGGAG+ DQI +LKRGA IVVCTPGRMIDILTMQAGKL+SL RVSFVV+DEADRMFDMGFEPQIKMIL N+RPDRQT LFSATFP+ VE+LA++VL  PLEI+VGGRS+AS  ITQ+VE+R++ ++K+MRLLQLLGVWYEKGN+L+FVDTQ KCD LF DL R+GY  LSLHGG DQ DRD TI DFK+++ TLMVATSVAGRGLDVP+L CVINY+CPNHLEDYVHRVGR XXXXX GTAYTF++++EE++AP L+KALTQSKQ++PPEL  MAE FQ KV +G A  A SGF GKGFTF+DSEQ+++Q+  +L+K+QY+I
Sbjct:  559 RLGRLFQSDGDLEEEDEEGPREGPKTALE-ILQEQVKKKELKAVDHARVDYLPIRKKLYIVPRALHGHSDAELNRRREALEIKVRGKGCPAPLETWEQSGLPDRVLGLLRKYKLAEPFPIQRQALPAIMAGRDIIGVAKTGSGKTLAFLLPMLRHILDQEASFPLGEGEGPIGMVMAPARELAVQIHTEAKKFCRPLGLRCVAVYGGAGIGDQIGELKRGAHIVVCTPGRMIDILTMQAGKLMSLSRVSFVVMDEADRMFDMGFEPQIKMILTNIRPDRQTVLFSATFPKQVESLARKVLAFPLEILVGGRSVASDAITQYVEVREEGEEKYMRLLQLLGVWYEKGNVLIFVDTQQKCDNLFADLMRSGYPCLSLHGGMDQMDRDSTIHDFKSRARTLMVATSVAGRGLDVPELCCVINYACPNHLEDYVHRVGRXXXXXXXGTAYTFLTSDEEQYAPLLLKALTQSKQEVPPELRAMAEAFQQKVTAGTAHWAGSGFGGKGFTFEDSEQTDAQRTAALQKKQYQI 1083          
BLAST of mRNA_Ecto-sp13_S_contig6705.17597.1 vs. uniprot
Match: K3WRX2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRX2_GLOUD)

HSP 1 Score: 586 bits (1510), Expect = 1.450e-197
Identity = 326/562 (58.01%), Postives = 401/562 (71.35%), Query Frame = 1
Query:  352 FMENFRKAREEE--DANRAVKTAKKQXXDDVAKEDARRKEEKLGRVFAG-EGDVMEEYERDKVEQDALQQLLQDSMKKKELKPVDHSKISYINLRKNLYIVPKALAMASEEKKENDRLELEIKVRGKGCPPVLHSWEQCGFSDRVLAVIRRNNF--------------------------------------------EPVLGEGEGPIGLIMAPARELAVQIYNEARKFTKALGLRVTAVYGGAGVADQIADLKRGAEIVVCTPGRMIDILTMQAGKLVSLDRVSFVVLDEADRMFDMGFEPQIKMILQNVRPDRQTALFSATFPRTVETLAKRVLKMPLEIIVGGRSIASSDITQHVEIRDDDDKFMRLLQLLGVWYEKGNILVFVDTQSKCDTLFQDLSRAGYHGLSLHGGKDQTDRDFTIADFKNKSATLMVATSVAGRGLDVPDLVCVINYSCPNHLEDYVHRVGRTXXXXXKGTAYTFISAEEEKHAPTLIKALTQSKQKIPPELVQMAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQMRSLEKRQYEI 1896
            FM   +  RE+E  D+N A +       D  A E    K+   GR++ G E D++ E E   ++Q +  ++LQ++ KKKE+K VDHS+I YI  +K  Y+VPK +   SE + E  R E EIK+RGK CP  L  W QCGFS R+L +I+++ +                                            +P L EGEGPIGLIMAPAREL  QIY EA+KF K LG+R TAVYGG+ V++QI +LKRG++IV+CTPGRMIDILTM AGK+VSL RV++VVLDEADRMFDMGFEPQI  I+ N+R DRQT LFSATFPR VETLA+RVLK P+EI VGGRS AS DITQ+VE+R+++DKFMRLLQLLG+WYEKGN+LVFV+TQ  CD +FQDL +AGY  LSLHGGKDQ DRD+TI DFK K  TLMVATSVAGRGLDV DLV VINY CPNHLEDYVHRVGRTXXXXXKGTAYTFIS +EE+++  L+KAL  +KQ +PPEL Q+AE F+ KV  G+AR   SGF GKG+TFD++E++E+Q+   L+KRQYEI
Sbjct:   83 FMRAIKGQREKEAKDSNEAPRANDDTLADKSAPEQDDGKKVDTGRIYQGFEEDIIGE-EAGNIDQRSALEILQEAQKKKEIKAVDHSQIEYIPFQKKFYVVPKEIKDMSEAEVEAIRNEDEIKIRGKNCPRPLKKWTQCGFSVRMLQLIQKHGYTEPFAIQRQALPAIMSGRDVIGIAKTGSGKTLAFLLPMFRHILYQPPLQEGEGPIGLIMAPARELVQQIYLEAKKFAKGLGMRATAVYGGSSVSEQIGNLKRGSDIVICTPGRMIDILTMSAGKMVSLKRVTYVVLDEADRMFDMGFEPQITKIMMNIRADRQTLLFSATFPRAVETLARRVLKKPVEITVGGRSTASGDITQYVEVREENDKFMRLLQLLGLWYEKGNVLVFVNTQQACDQVFQDLMKAGYPALSLHGGKDQVDRDYTIDDFKRKVRTLMVATSVAGRGLDVKDLVLVINYHCPNHLEDYVHRVGRTXXXXXKGTAYTFISPDEEEYSVDLVKALETAKQVVPPELSQLAEGFKDKVKRGEARFHGSGFKGKGYTFDENERNEAQRAMDLQKRQYEI 643          
BLAST of mRNA_Ecto-sp13_S_contig6705.17597.1 vs. uniprot
Match: H3G7N9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7N9_PHYRM)

HSP 1 Score: 581 bits (1498), Expect = 5.930e-197
Identity = 321/568 (56.51%), Postives = 408/568 (71.83%), Query Frame = 1
Query:  346 KEFMENFRKAREEED--ANRAVKTAKKQXXDDVAK----EDARRKEEKLGRVFAG-EGDVMEEYERDKVEQDALQQLLQDSMKKKELKPVDHSKISYINLRKNLYIVPKALAMASEEKKENDRLELEIKVRGKGCPPVLHSWEQCGFSDRVLAVIRRNNFE--------------------------------------------PVLGEGEGPIGLIMAPARELAVQIYNEARKFTKALGLRVTAVYGGAGVADQIADLKRGAEIVVCTPGRMIDILTMQAGKLVSLDRVSFVVLDEADRMFDMGFEPQIKMILQNVRPDRQTALFSATFPRTVETLAKRVLKMPLEIIVGGRSIASSDITQHVEIRDDDDKFMRLLQLLGVWYEKGNILVFVDTQSKCDTLFQDLSRAGYHGLSLHGGKDQTDRDFTIADFKNKSATLMVATSVAGRGLDVPDLVCVINYSCPNHLEDYVHRVGRTXXXXXKGTAYTFISAEEEKHAPTLIKALTQSKQKIPPELVQMAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQMRSLEKRQYEI 1896
            KEFM   ++ RE+E+  A  + +TA      + A     +D   K+++ GR++ G E D++ E + + V+Q +  ++LQ+  KKKE+KPVDHS ++Y+  +K  Y+VPK +   SEE+ E  R E EIK+RGK CP  L  W QCGFS R+L +I++  +E                                            P L E EGPIG++MAPARELA QIY E RKF+K LGLR TAVYGG+ V++QIA+LKRG++IVVCTPGRMIDIL M AGK+VSL RV++VVLDEADRMFDMGFEPQI  I+ N+RPDRQT LFSATFPR+VE+LA++VL+ P+EI VG RS AS DITQ+VE+R++DDKFMRLLQLLG+WYEKGNILVFV+ Q  CD +FQDL +AGY  LSLHGGKDQ DRD+TI DFK K  T+MVATSVAGRGLDV DLV VIN+ CPNH+EDYVHRVGRTXXXXXKGTAYTFIS +EE+++  L+KAL  +KQ +PPEL  +AE F+ KV  G+AR   SGF GKGFTFD++E++E+Q+   L++RQYE+
Sbjct:   10 KEFMRAIKEKREQEEKTAVSSPQTATINGEGNGAGLEPGDDPMLKKDETGRIYQGFEEDIIGE-DSELVDQRSALEILQEQQKKKEIKPVDHSNMNYVPFQKKFYVVPKEIKDISEEEVEAQRKESEIKIRGKSCPRPLQKWTQCGFSVRMLQLIKKQGYEEPFAIQKQALPAIMSGRDVIGIAKTGSGKTLAFLLPMFRHILAQPPLQENEGPIGIVMAPARELAQQIYVETRKFSKGLGLRATAVYGGSSVSEQIANLKRGSDIVVCTPGRMIDILCMSAGKMVSLQRVTYVVLDEADRMFDMGFEPQITKIMLNIRPDRQTLLFSATFPRSVESLARKVLRKPVEITVGTRSTASGDITQYVEVREEDDKFMRLLQLLGLWYEKGNILVFVNKQQACDQIFQDLMKAGYPALSLHGGKDQVDRDYTIDDFKRKVRTVMVATSVAGRGLDVKDLVLVINFHCPNHMEDYVHRVGRTXXXXXKGTAYTFISPDEEEYSVDLVKALENAKQIVPPELTALAEGFKAKVKRGEARYHGSGFKGKGFTFDETERNETQRTADLQRRQYEL 576          
BLAST of mRNA_Ecto-sp13_S_contig6705.17597.1 vs. uniprot
Match: A0A3R7KTU9_9STRA (Uncharacterized protein n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KTU9_9STRA)

HSP 1 Score: 587 bits (1514), Expect = 1.860e-196
Identity = 316/534 (59.18%), Postives = 390/534 (73.03%), Query Frame = 1
Query:  430 DDVAKEDARRKEEKLGRVFAG-EGDVMEEYERDKVEQDALQQLLQDSMKKKELKPVDHSKISYINLRKNLYIVPKALAMASEEKKENDRLELEIKVRGKGCPPVLHSWEQCGFSDRVLAVIRRNNFE--------------------------------------------PVLGEGEGPIGLIMAPARELAVQIYNEARKFTKALGLRVTAVYGGAGVADQIADLKRGAEIVVCTPGRMIDILTMQAGKLVSLDRVSFVVLDEADRMFDMGFEPQIKMILQNVRPDRQTALFSATFPRTVETLAKRVLKMPLEIIVGGRSIASSDITQHVEIRDDDDKFMRLLQLLGVWYEKGNILVFVDTQSKCDTLFQDLSRAGYHGLSLHGGKDQTDRDFTIADFKNKSATLMVATSVAGRGLDVPDLVCVINYSCPNHLEDYVHRVGRTXXXXXKGTAYTFISAEEEKHAPTLIKALTQSKQKIPPELVQMAEEFQGKVDSGQARKASSGFSGKGFTFDDSEQSESQQMRSLEKRQYEI 1896
            D   KED   K++  GR++ G E DV+ E + + V+  +  ++LQ+  KKKE+K VDHSK +Y+   K  Y+ PK +   SEE+ E  R E EIKVRGK CP  L  W QCGFS R+L +I+++ +E                                            P L EGEGPIG++MAPARELA QIY EARKF+K LGLR TAVYGG+ V++QIA+LKRG++IV+CTPGRMIDIL M AGK+VSL RV++VVLDEADRMFDMGFEPQI  I+ N+RPDRQT LFSATFPR+VE+LA++VL+ P+EI VG RS AS DITQ+VE+R++DDKFMRLLQLLG+WYEKGNILVFV+ Q  CD +FQDL +AGY  LSLHGGKDQ DRD+T+ DFK K  TLMVATSVAGRGLDV DLV VINY CPNH+EDYVHRVGRTXXXXXKGTAYTFIS +EE+++  L+KAL  +KQ IPPEL  +AE F+ KV  G+AR   SGF GKGFTFD++E++E+Q+   L++RQYE+
Sbjct:  261 DPTDKEDPMLKKDATGRIYQGFEEDVIGE-DSELVDHRSALEILQEQQKKKEIKAVDHSKANYLPFHKKFYVAPKEIKEQSEEQVEEQRKEFEIKVRGKNCPRPLQKWNQCGFSVRMLQLIQKHGYEEPFAIQKQALPAIMSGRDVIGIAKTGSGKTLAFLLPMFRHILHQPPLQEGEGPIGIVMAPARELAQQIYVEARKFSKGLGLRATAVYGGSSVSEQIANLKRGSDIVICTPGRMIDILCMSAGKMVSLQRVTYVVLDEADRMFDMGFEPQITKIMTNIRPDRQTLLFSATFPRSVESLARKVLRKPVEITVGTRSTASGDITQYVEVREEDDKFMRLLQLLGLWYEKGNILVFVNKQQACDQIFQDLMKAGYPALSLHGGKDQVDRDYTVDDFKRKVRTLMVATSVAGRGLDVKDLVLVINYHCPNHMEDYVHRVGRTXXXXXKGTAYTFISPDEEEYSVDLVKALENAKQSIPPELSALAEGFKAKVKRGEARYHGSGFKGKGFTFDETERNETQRTADLQRRQYEL 793          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6705.17597.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K7K3_9PHAE0.000e+089.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ88_ECTSI0.000e+093.99DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835YQB2_9STRA1.180e-23870.00P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2MCY9_9STRA1.780e-21864.57Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S2WWQ9_9STRA4.210e-20763.05Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TCV9_9STRA6.150e-20462.36Dead-box atp-dependent rna helicase 42-like protei... [more]
A0A4D9CQL0_9STRA9.440e-19861.98Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
K3WRX2_GLOUD1.450e-19758.01Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
H3G7N9_PHYRM5.930e-19756.51Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A3R7KTU9_9STRA1.860e-19659.18Uncharacterized protein n=5 Tax=Phytophthora kerno... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6705contigEcto-sp13_S_contig6705:490..8036 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score1073.2
Seed ortholog evalue5.2e-311
Seed eggNOG ortholog2880.D8LJ88
Model size1896
KEGG koko:K12811
KEGG Pathwayko03040,map03040
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904
Exons10
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0334@2759
EC3.6.4.13
Cds size1875
COG Functional cat.JKL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6705.17597.1prot_Ecto-sp13_S_contig6705.17597.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6705 511..8036 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463922.2364612-UTR-Ecto-sp13_S_contig6705:489..5101681463922.2364612-UTR-Ecto-sp13_S_contig6705:489..510Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6705 490..510 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463922.2542396-CDS-Ecto-sp13_S_contig6705:510..6631681463922.2542396-CDS-Ecto-sp13_S_contig6705:510..663Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6705 511..663 +
1681463922.2720478-CDS-Ecto-sp13_S_contig6705:1178..13521681463922.2720478-CDS-Ecto-sp13_S_contig6705:1178..1352Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6705 1179..1352 +
1681463922.2818513-CDS-Ecto-sp13_S_contig6705:1928..20271681463922.2818513-CDS-Ecto-sp13_S_contig6705:1928..2027Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6705 1929..2027 +
1681463922.2921438-CDS-Ecto-sp13_S_contig6705:3206..33081681463922.2921438-CDS-Ecto-sp13_S_contig6705:3206..3308Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6705 3207..3308 +
1681463922.3024163-CDS-Ecto-sp13_S_contig6705:3896..40251681463922.3024163-CDS-Ecto-sp13_S_contig6705:3896..4025Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6705 3897..4025 +
1681463922.3121457-CDS-Ecto-sp13_S_contig6705:4672..48011681463922.3121457-CDS-Ecto-sp13_S_contig6705:4672..4801Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6705 4673..4801 +
1681463922.3245761-CDS-Ecto-sp13_S_contig6705:5230..59611681463922.3245761-CDS-Ecto-sp13_S_contig6705:5230..5961Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6705 5231..5961 +
1681463922.345731-CDS-Ecto-sp13_S_contig6705:6637..68271681463922.345731-CDS-Ecto-sp13_S_contig6705:6637..6827Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6705 6638..6827 +
1681463922.3585472-CDS-Ecto-sp13_S_contig6705:7357..74921681463922.3585472-CDS-Ecto-sp13_S_contig6705:7357..7492Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6705 7358..7492 +
1681463922.3712-CDS-Ecto-sp13_S_contig6705:8003..80361681463922.3712-CDS-Ecto-sp13_S_contig6705:8003..8036Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6705 8004..8036 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6705.17597.1

>prot_Ecto-sp13_S_contig6705.17597.1 ID=prot_Ecto-sp13_S_contig6705.17597.1|Name=mRNA_Ecto-sp13_S_contig6705.17597.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=625bp
MESESDVGGSEEEDYGKAFDLADDDDDDGDKEDEPEPSDGEYVIPIRPIR
KVKRKNGRKYYPPSEFVPADVGPDGKVVVPVKAELSFKETTEERRKREAE
EEREELERKEFMENFRKAREEEDANRAVKTAKKQQEDDVAKEDARRKEEK
LGRVFAGEGDVMEEYERDKVEQDALQQLLQDSMKKKELKPVDHSKISYIN
LRKNLYIVPKALAMASEEKKENDRLELEIKVRGKGCPPVLHSWEQCGFSD
RVLAVIRRNNFEPVLGEGEGPIGLIMAPARELAVQIYNEARKFTKALGLR
VTAVYGGAGVADQIADLKRGAEIVVCTPGRMIDILTMQAGKLVSLDRVSF
VVLDEADRMFDMGFEPQIKMILQNVRPDRQTALFSATFPRTVETLAKRVL
KMPLEIIVGGRSIASSDITQHVEIRDDDDKFMRLLQLLGVWYEKGNILVF
VDTQSKCDTLFQDLSRAGYHGLSLHGGKDQTDRDFTIADFKNKSATLMVA
TSVAGRGLDVPDLVCVINYSCPNHLEDYVHRVGRTGRAGRKGTAYTFISA
EEEKHAPTLIKALTQSKQKIPPELVQMAEEFQGKVDSGQARKASSGFSGK
GFTFDDSEQSESQQMRSLEKRQYEI
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mRNA from alignment at Ecto-sp13_S_contig6705:490..8036+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6705.17597.1 ID=mRNA_Ecto-sp13_S_contig6705.17597.1|Name=mRNA_Ecto-sp13_S_contig6705.17597.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7547bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6705:490..8036+ (Ectocarpus species13 EcNAP12_S_4_19m)
GAGACGTGGGAATCAGACGTAATGGAGTCAGAGTCCGACGTTGGAGGGTC GGAGGAGGAGGACTACGGTAAGGCTTTCGACTTGGCGGACGATGATGATG ACGACGGCGACAAGGAGGACGAACCCGAACCCAGCGACGGGGAGTACGTG ATCCCTATCAGACCAATACGAAAGGTGATTGGTCCCATCAACACAGAGAA AAGCGGCGTGTGCTGCGTCTTACGAGAAGTGTTGAAAAGCGCGCCTTCAG AGAGAAGTATTGACAATCACGCCTTTTGAGAAGTGCTGAGGAACGCATCT TATGAGAAGTGTTGAGGAACGCCTCCTATGAAAAATCGTGAGGGCTTGCA CGTATACACCTGTTCTCGAACTGGTCATTGCTTAACTTCACCTCATGGGT GACCTGCTACTACCGCAGATAGGACACATCCTTTTCTCAATACACCTGGC TAAATCAACAACAACAAACTGGCTCTTAGCTTGAAGTCGCTACATGGGCC TCCTATCACCTCTACCACCGCCCATAGGACACGTCCTTTCCTCAAAAATT CCTGGCTATTCCTTAAGTTCGTACATCGCCTGTCACCACCACCACCACCG CCCATAGGACGTTCACCACTTGACCCTCTTATCACTTTGACCACTACCAA CACTAACATCGCCGCCGCCGCCGCCGCCGCCACCCTCAGGTGAAGCGAAA GAACGGCCGCAAGTACTACCCTCCCTCGGAGTTCGTGCCGGCAGACGTTG GTCCCGACGGAAAGGTGGTAGTACCCGTGAAGGCGGAGTTGTCGTTCAAA GAGACTACGGAGGAGCGAAGGAAGAGGGAGGCGGAGGAGGAGAGGGAGGA GTTGGAGCGGAAGGTGAAGACAAAGGCTTGTGGAGAAGCATTAAGCATGT TCCTGTATCGCGTAAGAGTCGGTTCTGAAGCTTCAGTTTCATCGAGGGTA ATTGTATGTTGTAGCGGTGGTCCTATGTTGCTCCTTGAGACAGTGGCGGT AATTTGAGGCGAAACACAACCGACCATCTTCGTCCGGTGTTTGGGTGGCC TGTAGGGGGCGACGCACGCCTTGGCTCTTCCGCGAACGAAATTTGCTTGG CCGAAGCTACTAGCTTGTAGCGTTCTTACATGCCCGAACAGATGTCGGTT GGCGTTTACTGTCGCTTGCTCAAGAACTTCCTTTTTTTTCTCGCCCTCAA GGGTTGAATGTGTATCGTACCGTTGGCCAAGATTTGCTCACGGGGTCACT CGCCCGTTCCCTGGCGGAGAGGTTGTTGTGTGCTTTGTGTGAATGTTCCC GTATATTGCTTGTGCGTGTAACGCGCACGTTGTTCTTTATATCCTGTGTT CCTGCTGTTTTGCAGGATTCTATGGACATTTTGCGTTGAACATGACTTCA TCCTCTTGCTGTGTTTTTGCTGTGTTGTTGTTTTTGCAGGAGTTCATGGA GAACTTTCGCAAGGCTCGGGAGGAAGAGGATGCTAACAGGGCCGTCAAAA CGGCTAAGAAGCAGCAGGAAGACGACGTGGCGAAGGAGGTGAGTCATCAG TAGTCAGAACTGTGGTCACTACAGCTGTCGCTGCCCGGTACGCTGCAGTT CATGCCCACACTCGAGAACTTGTTGTTTCGTCTCTTCTCATGCTGATGGG GTACCCTTGCGGCGATTACATAGGTTTTAGTGTAGGTTTATTGACTGAGC ATGTATTCTTCTAGCCAAGTTTTTGAACTTGTCTCCTCTTGAGCCTGGTT TTCCTACCTTCCAAGTTTTGAAGTGTGGGTCGCTTCTGTAGTAGACCGTG CTGATTCTGGCGTCGTCGCTGATATGTCTTCTCGCCTCAAAATAGGAATG AAACGATGAAAGTCTACACATGCATGGTTGATTGTGCGACCCGCGCAATA AGGTTGTGTTGAGTGGCATAAACCAAAGTGAAAATTGGGAAATTCCGCCT CCATCACACGCAGAACTACGATTTGTCTCTTATCTAGAAGTAGCGTACTT TTTGTTGTTGTTGTTATTGTTGTTGTTTGCCTCGTGGCGTGCTTATCTTT ATGTTCCCGTGAAATAAGCTGGTAGCTACTGATATGCGTCGGCATGCACG GTTCCTTCCTTGCGGTTATGGATGATCGTTTTTCCGTTCACCTCTGGTGG CCCATAGTTTCTTCCTTGTAAAATATTTTCAAAGCATACATAGCGCGGGT CATGTCGGGCTCTTATCGTTGTGGTTTTTCTACACGCCCCGTCCGGAGCT GCCTGCAATTATGTAGGAGCAGTCAAGCAACAAATCACCGTCTCAGACAT TCGTCTGATAGGGTATCCCTCTTACGCAGCAATCAGGCATGCCTGACTGC CCAGGGCTTGTTAGGCGTCGACCGTAGAGCGAGCAAGTTGTTACACAATC GAGTCACAAGTCGTTGTCCTATTTACCACGAGTTTGAGTCGTTGCGGTAA TGTAAGGATACCCTACGTATAATAGATACTGCTGCTCATTGTTAAGTTTT TAGGGCGGACTTCCAGCAACAAGTGCAAGTTGTTTTTTCAGCACTTTAGA TCAGCCCTCGCAGCCCACAGTTTTTTCCCGGTGAGATGTCCAATCCGTGT TCACACAGAAAAAGGTTTCCTCTCCCTGAGCCCCCCGCCCCACCAACCCT GCTGCGGCTAGTCATGGAAAAATTATTTTAAGCAACGGTTTGTGACCCGA TCGTGGGCGCGCGGCAGGATGCGAGGAGGAAAGAGGAGAAGCTGGGTCGA GTGTTCGCGGGCGAGGGGGACGTCATGGAGGAGTATGAGCGGGATAAGGT CGAGCAAGACGCCTTACAGGTATCCATTTGTGTACAAGTCATCCCTCCAT GAGTAGGCTATGTATTGCGAGCACAGCAGTGTCATCAAGGGGTGATGCAT GATGAAATATAGGCAGGCGGCAGGACCGACTCGCAGCCAGCTGCGGTGTG ACGTTTCTCAAGCTCACATAGCTGACGTGTTTTTGCCTCGAACAGCCCAG CGAATCTCAACGAACCACAACAAAAATTACACATGTGTAAACAGTTTTCT GCTGTTCCTTGGAACGACAAGTATGTAGAGGCGTTGAAGCTACGAATGTA CAGCATGTTGTCCATACGCTGTCGATGCACAGCGGCTATTCCATTGTGTT TCGGTCCCACACGGCGGTACAGGTACGGCTCGCTACCCTGGGTCTGTTGC ATCCAGAAGCCAAGGACGTGGGCTCGCTCTTGACCCGCATTCTAGCGCCG TTGCGCTTGGCAAGGTTTGGCCCGGAGGTTTTGTGGAGACTAGGCTTGCG CTGCCGTTCACGCACAACAAGTACCGCAACCAACACGCTCTCCTTTCGTT TTGGATCGCCTTTCGACCGCCAACGCACACGCTCGGCTCTTGTCCTCGAC ACGGGAGCAGCTGCTGCAAGACTCGATGAAAAAGAAGGAGCTCAAGCCCG TGGACCACAGCAAGATCAGCTACATCAACCTCCGCAAGAACCTGTACATC GTCCCGAAGGCTCTAGCCATGGCCTCCGAGGAGAAGGTAAGGACCGTTCA CGCCTTCCTTGCGTGGAAAACCGGCCACGGCCGTGCGCGTGTTTTTTCCG CATGTTGGGGGGGGGGTACTCGTGTTTTGCATGCCTTGGTTGTTAAATGA CCGTTGGCCACGAGAGGGCAGAGCATGTTGGGGATGTGAGTGCGTGCTTA CCACACTGTACCGTCGCAGATGCGTGACTCCCCCTTCGTTGATTATCGTT TTGATCGGGGCGTTCCTTGGGGATTTGGACTGGATTTGATTTTTGTCATG ATTCTGTCTTCCGAGACTCGTTCTCTTGCGTCTCTTAGAGAGGATCCTAC AGTGCTGCTGCTGTTGCTGCTGCTGCTGCAGTAGCAGCTGTTGCGTTCAA CCATTTACTAGCAATACTCGTTTGTCTTTGTGTTCTCGTCCATGGAGCCC CACTGTTTCTTGTTTCCATCCATACTTTGCAAGGTGCCATGCTATACACC ACGGCTTGACAAACCCGAAATTGCTTTTTAGTACTACTAAGTTTTTTTTG GTTGAGTCACTCTGACACGACGATTGTACGTATTTTTTTGGTGCACGGTT CGCAGAATGTTACCAAAAGGTGTCTCATGCTTCTCGCCCTGTCATCCTAC TGCTGCCTCTGGTGCTGTTTTAAACCGCCGCAGAAGGAGAACGACAGACT TGAGCTAGAGATCAAGGTTAGAGGGAAGGGCTGTCCGCCGGTGTTGCACT CCTGGGAGCAGTGCGGCTTCAGCGACAGGGTGCTGGCGGTCATCCGACGG AATAACTTCGAGGTGAGGTAACCTTGATACCACCACAAAAGAGTGATTGT GTTTATGTTTCTGCGCGTTTTTCTTTGTGTCTGCACTGGCCAAAAGCGCC CAAAGGCCTGCTGCACGTTTCAGCGGTAAACGTTAACTGCTAGTGGGTGG CACGTAAAATTCAAGACCTCTTCTTCTCATTTTGTCTGACTGTCACACAG CGCGACCCCTGTACATGAGGTACGAAACAACGCTCACGCCATCCACCGCC TAATAACACCTACCGCCCTTTTCCAATTTTTTCCCTGCGCCCCCCCCCCC CCTCCCTAGAAACCGTTTGCGATCCAGAAGCAAGCGATGCCCGCGCTCAT GTCCGGGCGCGACGTTATCGGCGTGGCGAGCACGGGGTCAGGGAAGACGC TGGCGTTCCTCCTCCCGTTGCTGCGGCACATCTTCGACCAGCCGGTGCTC GGCGAAGGGGAGGGTCCAATCGGTCTCATCATGGCTCCTGCCCGAGAGCT AGCCGTACAGATCTACAACGAGGCCCGGAAGTTCACGAAGGCGTTGGGCC TGAGGGTGACCGCGGTGTACGGCGGCGCCGGCGTGGCGGATCAGATCGCT GATCTTAAGCGCGGCGCCGAGATCGTGGTGTGCACCCCTGGTAGGATGAT CGACATCCTGACGATGCAGGCCGGGAAGCTGGTTTCTCTCGACAGGGTGT CGTTTGTGGTGCTGGACGAGGCGGACCGGATGTTCGACATGGGGTTCGAG CCGCAGATCAAGATGATCCTGCAGAACGTGAGGCCGGACAGGCAGACGGC GCTGTTCTCGGCGACGTTCCCGAGAACGGTCGAGACTCTGGCGAAGAGGG TCCTGAAGATGCCGCTCGAGATCATCGTCGGCGGTAGGAGCATCGCCAGC TCCGACATCACCCAGCACGTGGAGATCAGGGATGATGACGACAAGTTCAT GCGGCTGCTACAGCTGCTGGGCGTGTGGTACGAGAAGGGGAACATCCTAG TGTTCGTCGACACGCAGTCCAAGTGCGACACCCTCTTCCAGGACCTCTCG CGGGCGGGGTACCACGGGCTGTCGCTCCACGGTGGGAAGGACCAGACGGA CAGGGACTTCACCATCGCAGACTTCAAGAACAAGTCCGCCACGCTGATGG TGGCGACAAGCGTCGCCGGAAGGTGCGTGTGCTGGAGGGCGTTGTCTCTG CGGGTTTGTGCCATAGGCGTTTTGTCTCGCGATAACACGCGTCAGGATCG TCAGCCTTTCTATCAGGCTGTTTCTCTACTAAGGTGTTTTGTCTCTCTCG GTAACACAGCGTCGGCAATTCGTTGTCAGCAGTTGTGTCCACGGGATGAC GGGGCAAAAGGCGCATTGTGCTCGTTATTGAAGTGGGATCGGCGCCGTAG AGGGGGTGGTGCGGCATCGAGTGTCCAAGTTCGCTACAAGATTGCGCCTT GCTGTTTCTAGCAGACTCTGTTGCGTGTATCTGTAACCGGCAGCACAAGC ACAAAAGGGTCTCTTTTTTGTGAGCTGCTGCAGCACAGTTGCTTTTTCAT TTAGGGCGGGTTCTCTTCCTGGTCGTGCCCTCGCATACGCCTTGTGCATA AAAAAAAGGTTTCTAACCCCACACCACTCGGCATCCTCCCCCCCCCCCCC CCCCCCCCCCCCCCTCCGCCCGCCGCCTCCGCGGCCCCCTCCCCGCTCCC TGTTTCTTGTTGCTCTAACCTCCCCCGCCACACNNNNNNNNNNGTTCCCC CCCAAACCCCTTTTTAAAAAAAAAAAGGTTTTTACCCCCCCCCCCCCCGG CCTCCTTCCCCCCCCCCCCCCCCGTTTAATCCTTGGCGCGGTCTCCAGGG GTCTCGACGTCCCTGATCTGGTTTGCGTCATCAACTACTCGTGCCCGAAC CATTTGGAGGATTACGTCCACCGTGTCGGGAGGACGGGGAGAGCCGGGCG TAAGGGCACGGCGTACACGTTCATCAGCGCGGAGGAGGAGAAGCACGCCC CCACGCTCATCAAGGCCCTCACGCAGTCCAAGCAGAAGGTGTGTACTGAT AGGACCGATGGACACTGCTGCTGCCGCTGCTGCTGCTGTGCCTAGCTGGT TGTGTTGGGTGCCAAATGTAGGAGCGTGCGGGGTAAGAAGTACCTGATGG GGTTGAAGCGGGGGGTATGTAGTTGGGGGTGTGAGAGTCCCTCGGCTTGT ACGGGCCTGGATGTGTTTATAACTATCGCTACAAAATGTCTGTCTTGCGT TGATGTCGGCAGGCAGCAAGCTCCGTCCAGCGATCAACGTGGTCGATAGG GATTGTTCTGGTGTTTCTCTGTTGGCTCCCTTCCTCGCACGGAGGAGCCC TGTGTGTTGACCCTGTGTGTTGTTCATTGTAAACGAAAGCTTGCCTGCGG TCTCCAGCCAGGCATGAACTCGCACGTGTTGCGCCAGGTGTAAGGATGTT GTTCTTCAGCTGCCCTCGGAATTTTACTGTTTGTCTAATCTTCCTTCGCT TCTTCCATGCTGCTGCTGCTGCTGCTGGTGGTGCTGTTGCTGCTACTGTT GCTGCTGCATGGGTTCAGATACCGCCGGAGCTGGTGCAAATGGCCGAAGA ATTCCAGGGCAAGGTCGACAGCGGGCAGGCTCGAAAAGCCAGCAGCGGTT TCTCCGGCAAGGGCTTCACCTTCGACGACTCAGAGCAGAGCGAATCGCAG CAGGTGATGCCAATGCTTGGTGTTTTACCTTTTTGCCCTTTCGACTTTGG TAACTTGATGTTTACGCCCACTCGCCATGGCATACAGAGTCATGTTGTTT CGATTGTGCCGTAGGTTGTCCGGTGGAATCAGGTTTCGGGTTTAGGTCTA GGCGTGTATGGCAATTTTTGAGTAACGTGCGGTAGGGCTTGAAGTAGCGT AGTAGGTTCGTGCGTGCAGTTATACGTGGTACGGTGGACCGAGAGATCTC AAACCTCTGGCTCCAAGCACGACACCAAACCAACAGCAATTCTCTCGATT ATCTACGTAACGTTCGTGGCAGGTTCGTCAAGTACCACAACTGCTCCTTT TCCACCCACCACGATTAAGCCCCTTCGCCCTCTCTCCCTCCCTCTCCTCC CCGACACCGATGACACGCCCTCTTGGTTCTCCCCCCCGCCCCAATGTTCC ACCACTGATTCACCATCCGCACACATGCATTTTTCACTGCTGTGTTCTGG TCCCTTCCCCCTAGATGCGATCTCTGGAGAAACGGCAGTACGAGATT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6705:490..8036+

>mRNA_Ecto-sp13_S_contig6705.17597.1 ID=mRNA_Ecto-sp13_S_contig6705.17597.1|Name=mRNA_Ecto-sp13_S_contig6705.17597.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1875bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6705:490..8036+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGTCAGAGTCCGACGTTGGAGGGTCGGAGGAGGAGGACTACGGTAA
GGCTTTCGACTTGGCGGACGATGATGATGACGACGGCGACAAGGAGGACG
AACCCGAACCCAGCGACGGGGAGTACGTGATCCCTATCAGACCAATACGA
AAGGTGAAGCGAAAGAACGGCCGCAAGTACTACCCTCCCTCGGAGTTCGT
GCCGGCAGACGTTGGTCCCGACGGAAAGGTGGTAGTACCCGTGAAGGCGG
AGTTGTCGTTCAAAGAGACTACGGAGGAGCGAAGGAAGAGGGAGGCGGAG
GAGGAGAGGGAGGAGTTGGAGCGGAAGGAGTTCATGGAGAACTTTCGCAA
GGCTCGGGAGGAAGAGGATGCTAACAGGGCCGTCAAAACGGCTAAGAAGC
AGCAGGAAGACGACGTGGCGAAGGAGGATGCGAGGAGGAAAGAGGAGAAG
CTGGGTCGAGTGTTCGCGGGCGAGGGGGACGTCATGGAGGAGTATGAGCG
GGATAAGGTCGAGCAAGACGCCTTACAGCAGCTGCTGCAAGACTCGATGA
AAAAGAAGGAGCTCAAGCCCGTGGACCACAGCAAGATCAGCTACATCAAC
CTCCGCAAGAACCTGTACATCGTCCCGAAGGCTCTAGCCATGGCCTCCGA
GGAGAAGAAGGAGAACGACAGACTTGAGCTAGAGATCAAGGTTAGAGGGA
AGGGCTGTCCGCCGGTGTTGCACTCCTGGGAGCAGTGCGGCTTCAGCGAC
AGGGTGCTGGCGGTCATCCGACGGAATAACTTCGAGCCGGTGCTCGGCGA
AGGGGAGGGTCCAATCGGTCTCATCATGGCTCCTGCCCGAGAGCTAGCCG
TACAGATCTACAACGAGGCCCGGAAGTTCACGAAGGCGTTGGGCCTGAGG
GTGACCGCGGTGTACGGCGGCGCCGGCGTGGCGGATCAGATCGCTGATCT
TAAGCGCGGCGCCGAGATCGTGGTGTGCACCCCTGGTAGGATGATCGACA
TCCTGACGATGCAGGCCGGGAAGCTGGTTTCTCTCGACAGGGTGTCGTTT
GTGGTGCTGGACGAGGCGGACCGGATGTTCGACATGGGGTTCGAGCCGCA
GATCAAGATGATCCTGCAGAACGTGAGGCCGGACAGGCAGACGGCGCTGT
TCTCGGCGACGTTCCCGAGAACGGTCGAGACTCTGGCGAAGAGGGTCCTG
AAGATGCCGCTCGAGATCATCGTCGGCGGTAGGAGCATCGCCAGCTCCGA
CATCACCCAGCACGTGGAGATCAGGGATGATGACGACAAGTTCATGCGGC
TGCTACAGCTGCTGGGCGTGTGGTACGAGAAGGGGAACATCCTAGTGTTC
GTCGACACGCAGTCCAAGTGCGACACCCTCTTCCAGGACCTCTCGCGGGC
GGGGTACCACGGGCTGTCGCTCCACGGTGGGAAGGACCAGACGGACAGGG
ACTTCACCATCGCAGACTTCAAGAACAAGTCCGCCACGCTGATGGTGGCG
ACAAGCGTCGCCGGAAGGGGTCTCGACGTCCCTGATCTGGTTTGCGTCAT
CAACTACTCGTGCCCGAACCATTTGGAGGATTACGTCCACCGTGTCGGGA
GGACGGGGAGAGCCGGGCGTAAGGGCACGGCGTACACGTTCATCAGCGCG
GAGGAGGAGAAGCACGCCCCCACGCTCATCAAGGCCCTCACGCAGTCCAA
GCAGAAGATACCGCCGGAGCTGGTGCAAATGGCCGAAGAATTCCAGGGCA
AGGTCGACAGCGGGCAGGCTCGAAAAGCCAGCAGCGGTTTCTCCGGCAAG
GGCTTCACCTTCGACGACTCAGAGCAGAGCGAATCGCAGCAGATGCGATC
TCTGGAGAAACGGCAGTACGAGATT
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