prot_Ecto-sp13_S_contig670.17590.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig670.17590.1
Unique Nameprot_Ecto-sp13_S_contig670.17590.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length438
Homology
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BLAST of mRNA_Ecto-sp13_S_contig670.17590.1 vs. uniprot
Match: D7FT35_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT35_ECTSI)

HSP 1 Score: 421 bits (1083), Expect = 1.770e-143
Identity = 298/331 (90.03%), Postives = 304/331 (91.84%), Query Frame = 0 
Query:  107 MMEALKRSSDVDTVNFHNAGLTGASIDVLVEGLQHTTVRCLALDYNTSPVAPSSSSLPTRPPPSGTTKPAAAEAPATEGSSSLTRNFAGLVSEGSKLQALSLRGNALEDAEAIALAEAIEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLAGGYEVLPQEQEKRAAADVKIAAQNKLAADAMKKKKDAKVETRLPLSAVTVRTGEDGRSRAVAGGSRSLAALNLADNRDLGKGGALVGLLLRIVNARKEEAKEAGAXXXXXXXXGAVVLQELHLTRCQEYAEEAGGEDDTAIAAMSFALRPTKIVV 437
            MMEALKRSSDVDTV+FHNAGLTGASIDVLVEGL HTTVRC ALDYNT PV  SSSS PTRPPPSG T+PA  EAPATEG SSLTRNFAGLVSEGSKL+ALSLRGNAL DAEAIALAEAIE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LLLAGGYEVLP EQEKRAAADVKIAAQNKLAADAMKKKKDAKVETRLPLSAVTVRTGEDGRSRAVAGGSRSLAALNLADNRDLG+GGAL GLL RIVNARKEEA EAG         G+VVLQELHLTRCQ YAEEAGGEDDTAIAAMSFALRPTK+VV
Sbjct:    1 MMEALKRSSDVDTVDFHNAGLTGASIDVLVEGLPHTTVRCFALDYNTLPVVLSSSSPPTRPPPSGPTEPALEEAPATEGFSSLTRNFAGLVSEGSKLKALSLRGNALGDAEAIALAEAIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLLAGGYEVLPAEQEKRAAADVKIAAQNKLAADAMKKKKDAKVETRLPLSAVTVRTGEDGRSRAVAGGSRSLAALNLADNRDLGEGGALAGLLSRIVNARKEEAGEAGEGAGFGAGGGSVVLQELHLTRCQGYAEEAGGEDDTAIAAMSFALRPTKVVV 331
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig670.17590.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FT35_ECTSI1.770e-14390.03Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 200..227
e-value: 0.11
score: 21.6
coord: 256..283
e-value: 36.0
score: 6.1
coord: 228..255
e-value: 4.5
score: 12.5
NoneNo IPR availablePANTHERPTHR46984FAMILY NOT NAMEDcoord: 191..281
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 93..282
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 228..250
e-value: 9.7E-4
score: 19.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig670contigEcto-sp13_S_contig670:2027..4430 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig670.17590.1mRNA_Ecto-sp13_S_contig670.17590.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig670 1851..4861 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig670.17590.1 ID=prot_Ecto-sp13_S_contig670.17590.1|Name=mRNA_Ecto-sp13_S_contig670.17590.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=438bp
MVEAETLPSAVRTKMRHSDPWRATAMDGEAECLDWAAKDGQKPAGNFDAD
YVALCRLFEVPAHPCLASRLPGTTPNRDASAAAASKTTSSTIQLRNFAVD
LTTVRLMMEALKRSSDVDTVNFHNAGLTGASIDVLVEGLQHTTVRCLALD
YNTSPVAPSSSSLPTRPPPSGTTKPAAAEAPATEGSSSLTRNFAGLVSEG
SKLQALSLRGNALEDAEAIALAEAIEENTVLCSLNLFDNKITDVGASAFA
AILRINTVLRGLSLARNSLAPASAEAFGLLLAGGYEVLPQEQEKRAAADV
KIAAQNKLAADAMKKKKDAKVETRLPLSAVTVRTGEDGRSRAVAGGSRSL
AALNLADNRDLGKGGALVGLLLRIVNARKEEAKEAGAGAGFGAGGGAVVL
QELHLTRCQEYAEEAGGEDDTAIAAMSFALRPTKIVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt