prot_Ecto-sp13_S_contig66905.17567.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig66905.17567.1 vs. uniprot
Match: D7FWG1_ECTSI (Sm protein F n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWG1_ECTSI) HSP 1 Score: 66.6 bits (161), Expect = 8.570e-13 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
Query: 36 MATPVNPKPFLNELTGKPVMVKLKWGMEYK 65
MATPVNPKPFLNELTGKPVMVKLKWGMEYK
Sbjct: 1 MATPVNPKPFLNELTGKPVMVKLKWGMEYK 30
BLAST of mRNA_Ecto-sp13_S_contig66905.17567.1 vs. uniprot
Match: A0A1S3ID19_LINUN (Sm protein F n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3ID19_LINUN) HSP 1 Score: 64.7 bits (156), Expect = 7.200e-12 Identity = 33/56 (58.93%), Postives = 39/56 (69.64%), Query Frame = 0
Query: 11 RGVRECGCERRSRVATDKSSEEGQTMAT-PVNPKPFLNELTGKPVMVKLKWGMEYK 65
RG R C C R ++ +E + +T P+NPKPFLN LTGKPVMVKLKWGMEYK
Sbjct: 6 RGSRCCACAERVESVRKRNRQEKEMASTLPMNPKPFLNGLTGKPVMVKLKWGMEYK 61
BLAST of mRNA_Ecto-sp13_S_contig66905.17567.1 vs. uniprot
Match: A0A2I0AWL2_9ASPA (Putative small nuclear ribonucleoprotein F n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AWL2_9ASPA) HSP 1 Score: 63.2 bits (152), Expect = 2.700e-11 Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 0
Query: 30 SEEGQTMATPVNPKPFLNELTGKPVMVKLKWGMEYK 65
+E+G + PVNPKPFLN LTGKPV+VKLKWGMEYK
Sbjct: 41 AEQGSDQSVPVNPKPFLNNLTGKPVIVKLKWGMEYK 76
BLAST of mRNA_Ecto-sp13_S_contig66905.17567.1 vs. uniprot
Match: A0A218XIQ4_PUNGR (Sm protein F n=1 Tax=Punica granatum TaxID=22663 RepID=A0A218XIQ4_PUNGR) HSP 1 Score: 63.2 bits (152), Expect = 5.880e-11 Identity = 28/35 (80.00%), Postives = 29/35 (82.86%), Query Frame = 0
Query: 31 EEGQTMATPVNPKPFLNELTGKPVMVKLKWGMEYK 65
E G T PVNPKPFLN LTGKPV+VKLKWGMEYK
Sbjct: 59 ERGDTSTIPVNPKPFLNNLTGKPVIVKLKWGMEYK 93
BLAST of mRNA_Ecto-sp13_S_contig66905.17567.1 vs. uniprot
Match: A0A177WM22_BATDL (Sm protein F n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=A0A177WM22_BATDL) HSP 1 Score: 60.8 bits (146), Expect = 7.180e-11 Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0
Query: 39 PVNPKPFLNELTGKPVMVKLKWGMEYK 65
PVNPKPFLNELTGKP+MVKLKWGMEYK
Sbjct: 5 PVNPKPFLNELTGKPIMVKLKWGMEYK 31
BLAST of mRNA_Ecto-sp13_S_contig66905.17567.1 vs. uniprot
Match: A0A6I9KAW7_CHRAS (Sm protein F n=2 Tax=Eutheria TaxID=9347 RepID=A0A6I9KAW7_CHRAS) HSP 1 Score: 61.6 bits (148), Expect = 9.660e-11 Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 0
Query: 24 VATDKSSE---EGQTMATPVNPKPFLNELTGKPVMVKLKWGMEYK 65
V D S + EG ++ P+NPKPFLN LTGKPVMVKLKWGMEYK
Sbjct: 9 VVADNSDDAFLEGLCVSLPLNPKPFLNGLTGKPVMVKLKWGMEYK 53
BLAST of mRNA_Ecto-sp13_S_contig66905.17567.1 vs. uniprot
Match: A0A1S4C443_TOBAC (Sm protein F n=23 Tax=Magnoliopsida TaxID=3398 RepID=A0A1S4C443_TOBAC) HSP 1 Score: 60.5 bits (145), Expect = 1.630e-10 Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 0
Query: 36 MATPVNPKPFLNELTGKPVMVKLKWGMEYK 65
M+ PVNPKP+LN LTGKPVMVKLKWGMEYK
Sbjct: 1 MSVPVNPKPYLNNLTGKPVMVKLKWGMEYK 30
BLAST of mRNA_Ecto-sp13_S_contig66905.17567.1 vs. uniprot
Match: A0A4D9EQG6_9SAUR (Sm protein F n=1 Tax=Platysternon megacephalum TaxID=55544 RepID=A0A4D9EQG6_9SAUR) HSP 1 Score: 61.2 bits (147), Expect = 1.640e-10 Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 0
Query: 35 TMATPVNPKPFLNELTGKPVMVKLKWGMEYK 65
TM+ P+NPKPFLN LTGKPVMVKLKWGMEYK
Sbjct: 31 TMSLPLNPKPFLNGLTGKPVMVKLKWGMEYK 61
BLAST of mRNA_Ecto-sp13_S_contig66905.17567.1 vs. uniprot
Match: A0A199VBT5_ANACO (Sm protein F n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A199VBT5_ANACO) HSP 1 Score: 59.3 bits (142), Expect = 1.720e-10 Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 0
Query: 37 ATPVNPKPFLNELTGKPVMVKLKWGMEYK 65
A PVNPKPFLN LTGKPV+VKLKWGMEYK
Sbjct: 3 AVPVNPKPFLNNLTGKPVIVKLKWGMEYK 31
BLAST of mRNA_Ecto-sp13_S_contig66905.17567.1 vs. uniprot
Match: A0A0D9S0Q8_CHLSB (Sm protein F n=4 Tax=Boreoeutheria TaxID=1437010 RepID=A0A0D9S0Q8_CHLSB) HSP 1 Score: 61.2 bits (147), Expect = 1.880e-10 Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 0
Query: 35 TMATPVNPKPFLNELTGKPVMVKLKWGMEYK 65
TM+ P+NPKPFLN LTGKPVMVKLKWGMEYK
Sbjct: 37 TMSLPLNPKPFLNGLTGKPVMVKLKWGMEYK 67 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig66905.17567.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig66905.17567.1 ID=prot_Ecto-sp13_S_contig66905.17567.1|Name=mRNA_Ecto-sp13_S_contig66905.17567.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=65bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|