prot_Ecto-sp13_S_contig6681.17554.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6681.17554.1
Unique Nameprot_Ecto-sp13_S_contig6681.17554.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length378
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6681.17554.1 vs. uniprot
Match: D7FVI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI0_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 1.660e-98
Identity = 209/292 (71.58%), Postives = 213/292 (72.95%), Query Frame = 0 
Query:   88 QTNISGGSRKXXXXXXXXXXXXXXXXXXXXFRTDSSSRLLAXXXXX--EARXXXXADVATISAGADGVFTSSRGAMTNKSEMMGAFYGRDGTMHENGADFRRNASLSTGETACPTPSTKFKPAPATASRAAAAVTSDDDLTDTDEGVMARLADFTEMARRTAAHNEELSQELAAEKRRVAHSTRKLEQSHITCTELRESLALAQDTVVKLREHEMAWAESTASEMSLRSEMCALKDEYAGVSGDASTLRKRCDVLERENAELVERFATMAEEKRQMESKARRLLRSDRYRGY 377
            QTNISGGSRK    XXXXXXXXXXXXXXXX           XXXXX  EAR     DVAT S GADG    SR A+TNKSE+MGA YGRDGT  ENGADFRRNASL TG+TACPTPSTK  PAPATASRAA A TSDDDLTDTDEGVMARLA+F EMARRTAAHNE                                        VVKLREHEMAWAESTASEMSLRSEMCALKDEYAGVSGDAS LRKRCDVLERENAELVERFATMAEEKRQMESKARRLLRSDRYRGY
Sbjct:    8 QTNISGGSRKKSSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARAAADVDVATTSTGADGELKYSREALTNKSEIMGASYGRDGTTPENGADFRRNASLGTGKTACPTPSTKSVPAPATASRAAGAATSDDDLTDTDEGVMARLAEFIEMARRTAAHNE----------------------------------------VVKLREHEMAWAESTASEMSLRSEMCALKDEYAGVSGDASALRKRCDVLERENAELVERFATMAEEKRQMESKARRLLRSDRYRGY 259
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6681.17554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVI0_ECTSI1.660e-9871.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 330..364
NoneNo IPR availableCOILSCoilCoilcoord: 243..270

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6681contigEcto-sp13_S_contig6681:1810..4847 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6681.17554.1mRNA_Ecto-sp13_S_contig6681.17554.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6681 1220..5598 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6681.17554.1 ID=prot_Ecto-sp13_S_contig6681.17554.1|Name=mRNA_Ecto-sp13_S_contig6681.17554.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=378bp
MDKHQQQQSRSGSPSLSSPHALCDGGGVAGAGEQSTPTGSTVVPAAGYHD
RGTPSRSSSSSTRPSASGAMLDNRLAPRPTRSWDTAFQTNISGGSRKKSS
TAISTAAATAAAAAAAAFRTDSSSRLLASTAAVEARAAAAADVATISAGA
DGVFTSSRGAMTNKSEMMGAFYGRDGTMHENGADFRRNASLSTGETACPT
PSTKFKPAPATASRAAAAVTSDDDLTDTDEGVMARLADFTEMARRTAAHN
EELSQELAAEKRRVAHSTRKLEQSHITCTELRESLALAQDTVVKLREHEM
AWAESTASEMSLRSEMCALKDEYAGVSGDASTLRKRCDVLERENAELVER
FATMAEEKRQMESKARRLLRSDRYRGY*
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