prot_Ecto-sp13_S_contig6660.17533.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6660.17533.1
Unique Nameprot_Ecto-sp13_S_contig6660.17533.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length185
Homology
BLAST of mRNA_Ecto-sp13_S_contig6660.17533.1 vs. uniprot
Match: D7FTS3_ECTSI (CAB/ELIP/HLIP superfamily of protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS3_ECTSI)

HSP 1 Score: 361 bits (926), Expect = 2.220e-125
Identity = 178/184 (96.74%), Postives = 180/184 (97.83%), Query Frame = 0
Query:    1 MAAGSFGVFDNAQTEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDANVALDPKVWGTLAYTTGTETITNERAIIMIGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATIALATGQSFLEVVNAGLGGLLM 184
            MAAGSF VFDNAQ EFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDA+VALDPKVWGTLAYTTGTETITNERAIIM+GHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTAT AL TGQSFLEVVNAGLGGLLM
Sbjct:   45 MAAGSFSVFDNAQAEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDADVALDPKVWGTLAYTTGTETITNERAIIMMGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATTALTTGQSFLEVVNAGLGGLLM 228          
BLAST of mRNA_Ecto-sp13_S_contig6660.17533.1 vs. uniprot
Match: A0A6U4CWQ9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CWQ9_9STRA)

HSP 1 Score: 231 bits (588), Expect = 8.210e-74
Identity = 112/177 (63.28%), Postives = 136/177 (76.84%), Query Frame = 0
Query:    8 VFDNAQTEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDANVALDPKVWGTLAYTTGTETITNERAIIMIGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATIALATGQSFLEVVNAGLGGLLM 184
            VFD+A T+F  +FPE+ + GWGPT KAERWNGRHAMFGW AI+ATGY QAH LIPD +  LD K WGTLA   G  TITN RA+I+IGH+HAL +SVCAT+APLSFQDKLFL+   GE D PA GLIP+   GLT  AE++NGR+AM+GL+V    ++ +G   L VV+AGLGGLL+
Sbjct:   61 VFDDATTDFGKQFPEFYQLGWGPTTKAERWNGRHAMFGWVAIVATGYAQAHGLIPDFDKPLDLKEWGTLAIIAGKTTITNGRAVILIGHIHALMMSVCATIAPLSFQDKLFLE--EGEADEPAAGLIPAMDTGLTKSAELWNGRVAMLGLIVLVACSVGSGTPVLNVVDAGLGGLLL 235          
BLAST of mRNA_Ecto-sp13_S_contig6660.17533.1 vs. uniprot
Match: A0A6U4CP98_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CP98_9STRA)

HSP 1 Score: 231 bits (588), Expect = 4.250e-73
Identity = 112/177 (63.28%), Postives = 136/177 (76.84%), Query Frame = 0
Query:    8 VFDNAQTEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDANVALDPKVWGTLAYTTGTETITNERAIIMIGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATIALATGQSFLEVVNAGLGGLLM 184
            VFD+A T+F  +FPE+ + GWGPT KAERWNGRHAMFGW AI+ATGY QAH LIPD +  LD K WGTLA   G  TITN RA+I+IGH+HAL +SVCAT+APLSFQDKLFL+   GE D PA GLIP+   GLT  AE++NGR+AM+GL+V    ++ +G   L VV+AGLGGLL+
Sbjct:  113 VFDDATTDFGKQFPEFYQLGWGPTTKAERWNGRHAMFGWVAIVATGYAQAHGLIPDFDKPLDLKEWGTLAIIAGKTTITNGRAVILIGHIHALMMSVCATIAPLSFQDKLFLE--EGEADEPAAGLIPAMDTGLTKSAELWNGRVAMLGLIVLVACSVGSGTPVLNVVDAGLGGLLL 287          
BLAST of mRNA_Ecto-sp13_S_contig6660.17533.1 vs. uniprot
Match: A0A7S2MHN0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MHN0_9STRA)

HSP 1 Score: 218 bits (554), Expect = 7.350e-69
Identity = 110/176 (62.50%), Postives = 132/176 (75.00%), Query Frame = 0
Query:    8 VFDNAQTEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDANVALDPKVWGTLAYTTGTETITNERAIIMIGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATIALATGQSFLEVVNAGLGGLL 183
            VF +A TEFA ++P  +KYGWGP+ KAERWNGRHAMFGW AI+ TGYCQAH+LIPDA+  LD K WGTLA  +G  TI+NERAII+I HVHAL VSVCAT+AP+   D L L+   GE D PA G+ P F  GLT  AE++NGRMAMMGL+  ++ +L TG SFL  V+  LGGLL
Sbjct:   48 VFTDATTEFANDYPMMAKYGWGPSTKAERWNGRHAMFGWFAIVCTGYCQAHHLIPDADKLLDLKEWGTLATISGKATISNERAIILIAHVHALMVSVCATMAPM--MDTLLLE--PGEADEPAAGVFPPFETGLTSAAELWNGRMAMMGLITASSYSLMTGTSFLNTVDLWLGGLL 219          
BLAST of mRNA_Ecto-sp13_S_contig6660.17533.1 vs. uniprot
Match: A0A835Z6M5_9STRA (CAB/ELIP/HLIP superfamily of protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M5_9STRA)

HSP 1 Score: 208 bits (529), Expect = 4.290e-65
Identity = 102/176 (57.95%), Postives = 129/176 (73.30%), Query Frame = 0
Query:    8 VFDNAQTEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDANVALDPKVWGTLAYTTGTETITNERAIIMIGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATIALATGQSFLEVVNAGLGGLL 183
            VF +A   F+ ++P++ K GWGPT KAERWNGRHAMFGW  I+ATGY +AH LIPD  VAL+ K WGTL+   G +TI+NERA+++I +VHAL +S+CA  APLSFQD L   +  G+KD PA GLIP+ VPGLT EAE+ NGR+AM+GLV+    +LATG  FL  V+  LG  L
Sbjct:   45 VFTDATEAFSKDYPDFYKAGWGPTTKAERWNGRHAMFGWVLIVATGYAKAHGLIPDPEVALNLKEWGTLSILAGPQTISNERAVVLIANVHALFMSLCAAFAPLSFQDPLL--IPKGQKDEPAAGLIPAIVPGLTKEAELLNGRLAMLGLVLVMGHSLATGTPFLNSVDLFLGNRL 218          
BLAST of mRNA_Ecto-sp13_S_contig6660.17533.1 vs. uniprot
Match: A0A7S2W341_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W341_9STRA)

HSP 1 Score: 205 bits (521), Expect = 7.950e-64
Identity = 102/184 (55.43%), Postives = 129/184 (70.11%), Query Frame = 0
Query:    1 MAAGSFGVFDNAQTEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDANVALDPKVWGTLAYTTGTETITNERAIIMIGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATIALATGQSFLEVVNAGLGGLLM 184
            + A + GVFDNA  +F  ++PE+S  GWGP+ KAERWNGRHAMFGW  II TGY QAH LIP+ +  LD K WGTLA  +GT+TI+NERAII+I +VHA  V + A  APLS+ D L L+   GE D    G+ P F  G+T  AE++NGRMAMMG+V T + +L TG  F++ VN  LGGLL+
Sbjct:   41 LEAKTSGVFDNAVAKFKEDYPEFSAAGWGPSTKAERWNGRHAMFGWFFIICTGYAQAHGLIPEGDKLLDLKEWGTLATISGTKTISNERAIILIANVHAFMVGILAAFAPLSYMDTLLLE--DGEADEEPAGVFPPFDTGITSAAELWNGRMAMMGIVTTTSYSLLTGTPFMQTVNLWLGGLLI 222          
BLAST of mRNA_Ecto-sp13_S_contig6660.17533.1 vs. uniprot
Match: A0A7S1BP97_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BP97_9STRA)

HSP 1 Score: 199 bits (507), Expect = 2.510e-61
Identity = 101/179 (56.42%), Postives = 126/179 (70.39%), Query Frame = 0
Query:    5 SFGVFDNAQTEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDANVALDPKVWGTLAYTTGTETITNERAIIMIGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATIALATGQSFLEVVNAGLGGLL 183
            S  VF++A  E+ AE+P+++K+GWGP+ KAERWNGRHAMFGW  I+A+ Y   HNLIP+A++ALD K WGTLA  +G  TITNERA+I+I +VHAL VS  A +AP SF D+L L    GE D    GL+P  V GLTPEAEI NGRMAMMGL+     +       ++VVN  LGGLL
Sbjct:   75 SDAVFEDAMGEWKAEYPKFAKFGWGPSTKAERWNGRHAMFGWFVIVASAYAHGHNLIPNADMALDLKQWGTLATISGKSTITNERAVILIANVHALFVSFLAAMAPSSFADQLLLK--EGEVDEEPYGLVPPLVTGLTPEAEIMNGRMAMMGLIALVGTSAINQMPMVDVVNEWLGGLL 251          
BLAST of mRNA_Ecto-sp13_S_contig6660.17533.1 vs. uniprot
Match: A0A8J6CBU4_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CBU4_DIALT)

HSP 1 Score: 197 bits (501), Expect = 8.560e-61
Identity = 102/182 (56.04%), Postives = 126/182 (69.23%), Query Frame = 0
Query:    8 VFDNAQTEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDANVALDPKVWGTLAYTTGTETITNERAIIMIGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVP-----GLTPEAEIFNGRMAMMGLVVTATIALATGQSFLEVVNAGLGGLLM 184
            VF+ A   F  +FPE+SK G+GPT KAERWNGRHAMFGW  I+ATGY Q+HNLIP+ +  LD   WG LA      +ITN RAII+I HVHAL VS+ ++++P  FQD L L++ A E+D  A GL   FVP     GLT  AE+ NGR+AM+GL+     +LATGQ  LEVVN GLGGLL+
Sbjct:   45 VFEGAMANFEKDFPEFSKRGFGPTTKAERWNGRHAMFGWVVILATGYAQSHNLIPNFDAPLDLSAWGPLARQGDYSSITNGRAIILIAHVHALFVSLASSLSPFGFQDSLTLNMKAAERDEAAYGL---FVPIPGQAGLTAAAEMMNGRLAMLGLIAAVGASLATGQPLLEVVNTGLGGLLL 223          
BLAST of mRNA_Ecto-sp13_S_contig6660.17533.1 vs. uniprot
Match: A0A7S3JY58_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JY58_9STRA)

HSP 1 Score: 195 bits (495), Expect = 5.080e-60
Identity = 96/177 (54.24%), Postives = 123/177 (69.49%), Query Frame = 0
Query:    9 FDNAQTEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDANVALDPKVWGTLAYTTG-TETITNERAIIMIGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATIALATGQSFLEVVNAGLGGLLM 184
            F  A  +F +++P ++ YGWG + KAERWNGRHAMFGW  II TGY Q+H LIPDA+  LD  VWGTLA  T    TITNERAII++ ++HAL VS+CA  AP   QDKL L+   GE D    G+IP F PGL P+AE+ NGR+AM+G+   +  +L  G  F++VVN+ LGGLL+
Sbjct:   39 FTEATDKFKSDYPSFAAYGWGVSPKAERWNGRHAMFGWFFIICTGYAQSHGLIPDADKTLDLSVWGTLAQITPRVSTITNERAIILVANIHALMVSLCAAFAPFPTQDKLLLE--PGEADEDPAGIIPKFTPGLNPDAEMINGRLAMLGITTVSAYSLIYGVPFMDVVNSMLGGLLL 213          
BLAST of mRNA_Ecto-sp13_S_contig6660.17533.1 vs. uniprot
Match: F0Y7T9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7T9_AURAN)

HSP 1 Score: 188 bits (478), Expect = 6.370e-58
Identity = 100/177 (56.50%), Postives = 122/177 (68.93%), Query Frame = 0
Query:   12 AQTEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDANVALDPKVWGTLAYTTGTE----TITNERAIIMIGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATIALATGQSFLEVVNAGLGGLLM 184
            A   FA +FP ++ YGWG +AKAERWNGRHAMFGW  I+ATGYCQAH LIP+ + ALD K WGTLA  +G +    TITNERA I+I +VH L VS+CA   PL FQD L L+   GE D    GLIP+F  GLTP AE++NGR+AM+GLVV +  +L     FL  V+  LGG L+
Sbjct:    2 ATETFAKDFPIFNSYGWGVSAKAERWNGRHAMFGWVFIVATGYCQAHGLIPNPSQALDFKEWGTLAIISGGKGGGLTITNERACILIANVHFLMVSLCAAWCPLPFQDTLLLE--QGEPDEEPTGLIPAFDTGLTPAAEMWNGRLAMLGLVVVSAYSLIYQVPFLTAVDTMLGGTLL 176          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6660.17533.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTS3_ECTSI2.220e-12596.74CAB/ELIP/HLIP superfamily of protein n=2 Tax=Ectoc... [more]
A0A6U4CWQ9_9STRA8.210e-7463.28Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6U4CP98_9STRA4.250e-7363.28Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2MHN0_9STRA7.350e-6962.50Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835Z6M5_9STRA4.290e-6557.95CAB/ELIP/HLIP superfamily of protein n=1 Tax=Tribo... [more]
A0A7S2W341_9STRA7.950e-6455.43Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1BP97_9STRA2.510e-6156.42Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A8J6CBU4_DIALT8.560e-6156.04Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S3JY58_9STRA5.080e-6054.24Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0Y7T9_AURAN6.370e-5856.50Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 32..160
e-value: 2.8E-6
score: 27.9
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10coord: 2..180
e-value: 7.2E-8
score: 34.4
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 19..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6660contigEcto-sp13_S_contig6660:3099..4373 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6660.17533.1mRNA_Ecto-sp13_S_contig6660.17533.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6660 1578..5907 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6660.17533.1 ID=prot_Ecto-sp13_S_contig6660.17533.1|Name=mRNA_Ecto-sp13_S_contig6660.17533.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=185bp
MAAGSFGVFDNAQTEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAII
ATGYCQAHNLIPDANVALDPKVWGTLAYTTGTETITNERAIIMIGHVHAL
AVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNG
RMAMMGLVVTATIALATGQSFLEVVNAGLGGLLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR023329Chlorophyll_a/b-bd_dom_sf