prot_Ecto-sp13_S_contig6649.17509.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6649.17509.1
Unique Nameprot_Ecto-sp13_S_contig6649.17509.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length562
Homology
BLAST of mRNA_Ecto-sp13_S_contig6649.17509.1 vs. uniprot
Match: A0A6H5JSS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSS0_9PHAE)

HSP 1 Score: 329 bits (844), Expect = 5.040e-101
Identity = 266/475 (56.00%), Postives = 284/475 (59.79%), Query Frame = 0
Query:  170 VSASPKNNGRHRHPAEGARAIIDSPGRGTPGSGRSGNRAGAGGFLRLVRDSGNSSAATTSVSGRGEEDVTSGGLRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--RQHRQGRGAGDDGHLRTEEEEEAITRPTRGGGTVRKGGERAGAGWGGLASSSGTGXLGVGXXXXXXXXXXXXASSATRLLR-RVELRTPAE----------------------------------------------------------------------------EEEAEAVRKSQELTLSYNAPMRESKGAACPSNYRHVNGSGGALLERTREGNDPDHHHPGVAVGGVRATERKGQEEXXXXXXXXXXXXXXXXXXXXX-PRLRGAASDAPAGVGQDPQEPPS---LXXXXXXGEMEAGREISDIDRRLGELHEFLKRAKEGGGVXXXXXXXXXXXXXSEVCAEAATEASASSPGV 561
            VSASPKN GRHRHPAEGA AI+DSPG GTPGSGR G+RAG GGFLRLVRDSGNSSAATTS+SGRGEEDVTSGG RRRXX     XXXXXXXXXXXXX                  RQH +GR AGDDG  R E EEEAITRPTRGGGTVR G   AGAGWGGLA     G + +             AS  T+ L+  +E++ P                                                                               +   A R+SQELT SYNAP+RESK  A PSN RHV+GSGG L+ RTREGNDP+HHHPGVA GGVRATER GQ E       XXXXXXXXXXXXXX PRLRGAA DAPA  GQDPQEPPS   + XXXXXGEMEAGREISDIDRRLGELHEFLKRAKEGGGV              EV AEAA EASA SP V
Sbjct:  221 VSASPKNYGRHRHPAEGAPAIVDSPGAGTPGSGRGGSRAGVGGFLRLVRDSGNSSAATTSMSGRGEEDVTSGGWRRRXXPRDRWXXXXXXXXXXXXXARDSEVEHELHQREEEEGRQHCEGRRAGDDGRRRKEGEEEAITRPTRGGGTVRNGXGTAGAGWGGLAG----GLVLLVHEVFGGVVGDAAASEVTQCLQLSLEVKAPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLPRKIPPAPRQSQELTSSYNAPLRESKSTASPSNRRHVSGSGGILVGRTREGNDPNHHHPGVAAGGVRATERTGQGEGQRRQAFXXXXXXXXXXXXXXXPRLRGAAIDAPADDGQDPQEPPSFAAVDXXXXXGEMEAGREISDIDRRLGELHEFLKRAKEGGGVGAGLPLALPPAPTLEVGAEAAAEASACSPVV 691          
BLAST of mRNA_Ecto-sp13_S_contig6649.17509.1 vs. uniprot
Match: D7G256_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G256_ECTSI)

HSP 1 Score: 250 bits (638), Expect = 2.470e-72
Identity = 310/595 (52.10%), Postives = 332/595 (55.80%), Query Frame = 0
Query:    1 MRTLSLTVSCRLMQVGRRPSETGAERDRILGSGV--AAIAPR---GRTTMRDGGSSGYASAGSRAXXXXXSSSTRCEGVHNCRGXXXXXXXXXXXXXXXXXXXTKYSASGRFEATPNGSRMVGAGQPSFRADSRGRWGASPSRSSGGRYGGGGGARATGGRDSPRTLTLRQPRKVSASPKNNGRHRHPAEGARAIIDSPGRGTPGSGRSGNRAGAGGFLRLVRDSGNSSAATTSVSGRGEEDVTSGGLRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQHRQGRGAGDDGHLRTEEEEEA------------------------ITRPTRGGGTVRKGGERAGAGWGGLASSSGTGXLGVGXXXXXXXXXXXXASSATRLLRRVELRTPAEEEEAEAVRKSQELTLSYNAPMRESKGAACPSNYRHVNGSGGALLERTREGNDPDHHHPGVAVGGVRATERKGQEEXXXXXXXXXXXXXXXXXXXXXPRLRGAASDAPAGVGQDPQEPPSLXXXXXX-----GEMEAGREISDIDRRLGELHEFLKRAKEGGGVXXXXXXXXXXXXXSEVCAEAATEASASSPGV 561
            M  LSLTVS RLMQVGRRPSETGAE DR+L      A++ PR   GR    +G                 + +T  +G                   XXXXXX    A  R    P  S+     QP   A  RG+ G    +++GG            G + P    L      +A P   GR     EGA AI+DSPG GTPGSGR G+RAGAGGFLRLVRDSGNSSAAT S SGRGEEDV  GG RR XXXX     XXXXXXXXXXXXXXXXX                R +G +  L   EEEE                                                         X    XXXXXXXXXXXX   ATRLLRRVELRTPAEEEEAEAVRKSQELT SYNAP+RESK AA P NYRHV+GSGGAL+ R R GNDPDHH+PGVA GGVRATER GQEE XXXXXXXXXXXXXXXXXXXX                        XXXXXX     GEMEAGREISDIDRRLGELHEFLKRAKEGGGV   XXXXXXXXXXSEV AEAATEASASS  V
Sbjct:    1 MSALSLTVSRRLMQVGRRPSETGAEGDRVLSREKFRASLPPRHEEGRPCAAEG-----------------APATPLQGPRLRGRPGALRLVLPIAAAXXXXXXXAVLAEVRNTQPPVDSK-----QPRTVAAGRGQGGPLLGQTAGG------------GGEHPLLEVLASGMAAAAMP---GRPEVGIEGAPAIVDSPGGGTPGSGRGGSRAGAGGFLRLVRDSGNSSAATLSTSGRGEEDVAGGGWRRXXXXXDRWDDXXXXXXXXXXXXXXXXX----------------RDSGVEQGLHRREEEEGWQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATRLLRRVELRTPAEEEEAEAVRKSQELTSSYNAPVRESKSAASPRNYRHVSGSGGALVGRMRGGNDPDHHYPGVAAGGVRATERTGQEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGEMEAGREISDIDRRLGELHEFLKRAKEGGGVGAAXXXXXXXXXXSEVGAEAATEASASSAAV 542          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6649.17509.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSS0_9PHAE5.040e-10156.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G256_ECTSI2.470e-7252.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6649contigEcto-sp13_S_contig6649:1980..7611 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6649.17509.1mRNA_Ecto-sp13_S_contig6649.17509.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6649 1980..7611 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6649.17509.1 ID=prot_Ecto-sp13_S_contig6649.17509.1|Name=mRNA_Ecto-sp13_S_contig6649.17509.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=562bp
MRTLSLTVSCRLMQVGRRPSETGAERDRILGSGVAAIAPRGRTTMRDGGS
SGYASAGSRASRASRSSSTRCEGVHNCRGGGGGGGVFFCFFFVVGGGGTK
YSASGRFEATPNGSRMVGAGQPSFRADSRGRWGASPSRSSGGRYGGGGGA
RATGGRDSPRTLTLRQPRKVSASPKNNGRHRHPAEGARAIIDSPGRGTPG
SGRSGNRAGAGGFLRLVRDSGNSSAATTSVSGRGEEDVTSGGLRRRRRPR
DRWDDDDDDGDGDGACDSEVEQELHQREEEEGRQHRQGRGAGDDGHLRTE
EEEEAITRPTRGGGTVRKGGERAGAGWGGLASSSGTGGLGVGGGSCSSSM
RSSAASSATRLLRRVELRTPAEEEEAEAVRKSQELTLSYNAPMRESKGAA
CPSNYRHVNGSGGALLERTREGNDPDHHHPGVAVGGVRATERKGQEEGRR
RAFFSASSSSSIQQQKEEPRLRGAASDAPAGVGQDPQEPPSLAGGGGGGE
MEAGREISDIDRRLGELHEFLKRAKEGGGVGAGLPLPLPPPPPSEVCAEA
ATEASASSPGV*
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