prot_Ecto-sp13_S_contig6646.17506.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6646.17506.1
Unique Nameprot_Ecto-sp13_S_contig6646.17506.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1106
Homology
BLAST of mRNA_Ecto-sp13_S_contig6646.17506.1 vs. uniprot
Match: D7FLB0_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB0_ECTSI)

HSP 1 Score: 956 bits (2472), Expect = 0.000e+0
Identity = 874/1110 (78.74%), Postives = 897/1110 (80.81%), Query Frame = 0
Query:    1 GKGRAPRFRLATRRSSLLKEDTGGDSGTHKDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSTEDGRV-----KREATTANSVQNLLIEVPARQRSRVLENVVTYYSKGSHAVVITGSTAECDELADGRTFKTLTSQVLSGDDREQTIKGFLTKGVKVLVVTHVDARGIDMSDIDLVVHYRPPRDADCYAHRSGRMEKAGRPGVTVTLCAENEMCDMRNIEQRVGFRFECRAVPSEEQMMTLAVMPARQQIKGVSDDRAEFFRGAAQELLAENNSADTELLLAKCLATIARMADRKTDVAASDDEADTEXXXXXXXXXXXXXXXXXXHKKEQYPIPGGSAESVLQADTPVEDSLNDWQYLTPDDEVSISTSDAHQPSAASPSQPASNQVASTATPVVVRAVPERAVRAAEASTAAIRSKGKGTGGAXXXXXXXXXXXXXXXXXXXXXXXDGDCVAVDAIKRHDSAKMGLDLSGEGDRVGVPENIVTGPLQVQQVQEGQAASSAPAPAAQGVSETAVKAAKASAEAVAAKNNASGAPGGTPGXXRXKXXXVCEXXXXXXXXXSNCIIVDADKGPESMKLGLGLSEGGGIDGVLKDASPLEDIVAGGAAAVVGGTSGEAQHDGETQEAGEDEEGEALWNEDSDEEVDVAPAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRHGVSVPDHSPSDDCESVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRAAASTGINYAAFNEGLPLEDLESDDGGSVEVTGKKRPRTTKSGSQSKPKRRRGTDELGRLQPNRSSSXXXXEEEVFGEDCDDVAIPPTNGAPTAKGRAAGRQVPTRSRRGATPPGESPSPLRSLENTDDGSGADTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHENVMWYTYLEFLAKAVQGGGKGAAFMEKFDSIKHAFTDYRKAIKNFEGRVCTIRESVAAGGSWNQEFM 1105
            GKGRAPR +LATR SSLL EDTGGDSG  KD  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXX   XXXX  XXXXXXXXXXXXXXXXXXXXXXXXXX GTSTED RV     K+E T ANSVQNL IEVPA QRSRVLEN+VTYYSKGSHAVVI GS AECDELADGRTFKTLTSQVLSGDDREQ+IKGFLTKGVKVLVVT VDARGI+MSDIDLVVHYRPPRDADCY HRS RME+A RPGVTVTL AENE+CD+RNIEQRVGFRFECRAVPSEEQMM LAVM ARQQIKGVSDDRAEFFRGAAQELLAE+ SADTELLLAKCLATIARM DRKTDVAASDDEADTEXXXXXXXXXXXXXXXXX HKKEQ PIP GSAESVLQADT  ED LNDWQYLTPDDEVSIS SDAH  SAASPSQPASNQ ASTAT VVVRAVPERAV+AAEASTAAIRSK KGT GAXXXXXXXXXXXXXXXXXXXXXXX+ DCVAVDA+K  DSAKMGLDLSGEGDRVG+PENIVTGPLQV+Q QEGQAA SAPA AAQGVSETAVKAAKASAEAV AKNNASGAPGGTPGXXR KXXX   XXXXXXXX S+ IIVDADKGPES KLGLGLS GGGIDGVL+DAS L+DIVAGG A VVG TSGEAQ  GETQE G+DEEGEALWNEDSDEEVDVAPAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                     XXXPRRAAASTGINYAA +EGL  EDLE+                                                                       +GRAAG QV TRSRRGATPPGESPSPLRSLENTDDGSGA TGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     EHENVMWYTYLEFLAKAVQGGGKGAAFMEKFDS +HAFTDYRKAIKNFEGRVCTIRES+AAGGSWNQEFM
Sbjct:   22 GKGRAPRSQLATRTSSLLMEDTGGDSGADKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXDEEXXXXIEXXXXXXXXXXXXXXXXXXXXXXXXXXEGTSTEDNRVVPLQVKQEVTNANSVQNLFIEVPAWQRSRVLENIVTYYSKGSHAVVIAGSKAECDELADGRTFKTLTSQVLSGDDREQSIKGFLTKGVKVLVVTDVDARGINMSDIDLVVHYRPPRDADCYVHRSDRMERAVRPGVTVTLYAENEICDIRNIEQRVGFRFECRAVPSEEQMMALAVMLARQQIKGVSDDRAEFFRGAAQELLAEDKSADTELLLAKCLATIARMTDRKTDVAASDDEADTEXXXXXXXXXXXXXXXXXQHKKEQCPIPEGSAESVLQADTTGEDGLNDWQYLTPDDEVSISASDAHHSSAASPSQPASNQAASTATSVVVRAVPERAVKAAEASTAAIRSKRKGTRGAXXXXXXXXXXXXXXXXXXXXXXXNSDCVAVDAVKGQDSAKMGLDLSGEGDRVGLPENIVTGPLQVRQEQEGQAALSAPAAAAQGVSETAVKAAKASAEAVTAKNNASGAPGGTPGXXRGKXXXXXXXXXXXXXXYSDRIIVDADKGPESTKLGLGLSAGGGIDGVLEDASSLQDIVAGGGATVVGDTSGEAQDYGETQEGGKDEEGEALWNEDSDEEVDVAPAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------XXXPRRAAASTGINYAAIHEGLSPEDLET-----------------------------------------------------------------------RGRAAG-QVRTRSRRGATPPGESPSPLRSLENTDDGSGAGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----EHENVMWYTYLEFLAKAVQGGGKGAAFMEKFDSKRHAFTDYRKAIKNFEGRVCTIRESIAAGGSWNQEFM 1000          
BLAST of mRNA_Ecto-sp13_S_contig6646.17506.1 vs. uniprot
Match: D8LE98_ECTSI (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE98_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 3.860e-73
Identity = 151/230 (65.65%), Postives = 172/230 (74.78%), Query Frame = 0
Query:  135 TEDGRVKREATTANSVQNLLIEVPARQRSRVLENVVTYYSKGSHAVVITGSTAECDELADGRTFKTLTSQVLSGD----DREQTIKGFLTKGVKVLVVTHVDARGIDMSDIDLVVHYRPPRDADCYAHRSGRMEKAGRPGVTVTLCAENEMCDMRNIEQRVG--FRFECRAVPSEEQMMTLAVMPARQQIKGVSDDRAEFFRGAAQELLAENNSADTELLLAKCLATIAR 358
            T D   K     A +V++L IEV +R RS +LE+++TYY KGSHA+V T S AECDELADG+TFKTLTSQVL GD     R+QTIK F  KG +VLV T V ARGID+SDIDLVV YRPPRD D Y HRSGR  +AGRPGV VTL AENE+ D+R IEQ VG  FRFE  AVPS EQ+M+LA   AR+QIKGVSDD  +FFR +AQELLAE  S D ELLLAKCLA IAR
Sbjct:  468 TVDAVGKHVNKLATTVKHLSIEVSSRHRSSMLEDIITYYGKGSHAIVFTNSKAECDELADGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDDMVDFFRESAQELLAEEESEDKELLLAKCLAAIAR 697          
BLAST of mRNA_Ecto-sp13_S_contig6646.17506.1 vs. uniprot
Match: A0A836CKS6_9STRA (RNA helicase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKS6_9STRA)

HSP 1 Score: 196 bits (498), Expect = 3.110e-49
Identity = 117/222 (52.70%), Postives = 146/222 (65.77%), Query Frame = 0
Query:  147 ANSVQNLLIEVPARQRSRVLENVVTYYSKGSHAVVITGSTAECDELADGRTFKTLTSQVLSGD----DREQTIKGFLTKGVKVLVVTHVDARGIDMSDIDLVVHYRPPRDADCYAHRSGRMEKAGRPGVTVTLCAENEMCDMRNIEQRVG--FRFECRAVPSEEQMMTLAVMPARQQIKGVSDDRAEFFRGAAQELLAENNS----ADTELLLAKCLATIAR 358
            A +V++L IE P+R R+ +LE+V+  Y KGS A+V T +  ECDELA G  FKTL+SQVL GD     RE TI  F     +VLV T V ARGID+S+IDLVV YRPP D D Y HRSGR  +AGR G  VTL A+NE  D++ IE+ +G  F+FE  AVPS  Q+M +A   A + +  VS D   FF  AA+ELLAE+ +     DTE LLA+CLA IAR
Sbjct:  275 ATTVKHLAIETPSRNRAHMLEDVIAVYGKGSRAIVFTQTKRECDELAAGNAFKTLSSQVLHGDIGQNQREVTIGQFRKGQFQVLVATDVAARGIDISEIDLVVQYRPPTDPDTYVHRSGRTGRAGRLGTCVTLFADNERRDVQKIEKAIGKGFKFERAAVPSATQVMEVAGKVALKALDTVSADVVPFFTPAARELLAESQADGAELDTEQLLARCLAAIAR 496          
BLAST of mRNA_Ecto-sp13_S_contig6646.17506.1 vs. uniprot
Match: A0A6H5JE12_9PHAE (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE12_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 1.580e-45
Identity = 94/109 (86.24%), Postives = 97/109 (88.99%), Query Frame = 0
Query:  145 TTANSVQNLLIEVPARQRSRVLENVVTYYSKGSHAVVITGSTAECDELADGRTFKTLTSQVLSGDDREQTIKGFLTKGVKVLVVTHVDARGIDMSDIDLVVHYRPPRDA 253
            T+AN VQNLLIEVPARQRSRVLEN+VTYYSKGSHAVVITGS AECDELADGRTFKTLTSQ         TIKGFLTKGVKVLVV+ VDARGIDMSDIDLVVHYRPPRDA
Sbjct:  195 TSANIVQNLLIEVPARQRSRVLENIVTYYSKGSHAVVITGSKAECDELADGRTFKTLTSQ---------TIKGFLTKGVKVLVVSDVDARGIDMSDIDLVVHYRPPRDA 294          
BLAST of mRNA_Ecto-sp13_S_contig6646.17506.1 vs. uniprot
Match: A0A835ZP19_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZP19_9STRA)

HSP 1 Score: 143 bits (360), Expect = 3.200e-31
Identity = 87/165 (52.73%), Postives = 107/165 (64.85%), Query Frame = 0
Query:  204 QVLSGD----DREQTIKGFLTKGVKVLVVTHVDARGIDMSDIDLVVHYRPPRDADCYAHRSGRMEKAGRPGVTVTLCAENEMCDMRNIEQRVG--FRFECRAVPSEEQMMTLAVMPARQQIKGVSDDRAEFFRGAAQELLAENNSA----DTELLLAKCLATIAR 358
            QVL GD     RE TI  F     +VLV T V ARGID+S+IDLVV YRPP D D Y HRSGR  +AGR GV VTL A+NE  DM+ IE+ VG  F+FE   VPS  Q+M +A   A + +  VS++   FF  AA+EL+AE+ ++    DTE LLA+CLA IAR
Sbjct:  377 QVLHGDIGQNQREVTIGQFRKSQFQVLVATDVAARGIDISEIDLVVQYRPPTDPDTYVHRSGRTGRAGRSGVCVTLYADNERRDMQKIERAVGKGFKFERAPVPSPAQVMEVAGTVALKSLTAVSEEVVPFFSSAAKELIAESTASEGGLDTEKLLARCLAAIAR 541          
BLAST of mRNA_Ecto-sp13_S_contig6646.17506.1 vs. uniprot
Match: A0A7S4R924_9STRA (RNA helicase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R924_9STRA)

HSP 1 Score: 132 bits (332), Expect = 9.650e-28
Identity = 77/185 (41.62%), Postives = 107/185 (57.84%), Query Frame = 0
Query:  180 VVITGSTAECDELADGRTFKTLTSQVLSGD----DREQTIKGFLTKGVKVLVVTHVDARGIDMSDIDLVVHYRPPRDADCYAHRSGRMEKAGRPGVTVTLCAENEMCDMRNIEQRVG--FRFECRAVPSEEQMMTLAVMPARQQIKGVSDDRAEFFRGAAQELLAENNSADTELLLAKCLATIAR 358
            +V T +  + DEL  G  FK+LT+Q L GD     R+ T+  F      VLV T V ARGID++D+DLV+ + PPRD D Y HRSGR  +AGR G +V L   N+  D+  IE+ +G  F+FE    PS E  +T A   +    + V ++ A+FF  AA  LL   N  D + ++A+CLA I+R
Sbjct:  407 IVFTETKRDADELVSGSIFKSLTAQALHGDVGQKQRDATLAAFRAGAFNVLVATDVAARGIDITDVDLVIQFEPPRDVDTYVHRSGRTGRAGRKGTSVLLFRPNQSRDIVKIERSLGHGFKFELAGPPSIEAALTAAAKTSAIACRSVPEETAKFFTDAAGSLL--ENGEDPQEVVARCLAAISR 589          
BLAST of mRNA_Ecto-sp13_S_contig6646.17506.1 vs. uniprot
Match: A0A1Y1JG62_PLAGO (RNA helicase n=1 Tax=Plasmodium gonderi TaxID=77519 RepID=A0A1Y1JG62_PLAGO)

HSP 1 Score: 125 bits (313), Expect = 1.400e-25
Identity = 72/221 (32.58%), Postives = 128/221 (57.92%), Query Frame = 0
Query:  146 TANSVQNLLIEVP--ARQRSRVLENVVTYYSKGSHAVVITGSTAECDELADGRTFKTLTSQVLSGD----DREQTIKGFLTKGVKVLVVTHVDARGIDMSDIDLVVHYRPPRDADCYAHRSGRMEKAGRPGVTVTLCAENEMCDMRNIEQRVGFRFECRAVPSEEQMMTLAVMPARQQIKGVSDDRAEFFRGAAQELLAENNSA--DTELLLAKCLATIAR 358
            T+ +++++ I+ P   ++++ +LE+++   S G   ++ T +  E D L    +FK+L+  VL G+     RE T++ F     ++L+ T + ARG+D+S++DLVV   PP  A+ Y HRSGR  +A + GV+V L +  +  D+  IE+  G +F    +P+ E + T A   A ++I+ V++D   FF   A EL+ + N+   D   L+A+CLA I++
Sbjct:  365 TSKNIKHIAIKTPYDIKEKALLLEDIILVKSNGGQVIIFTRTKLEADILCSEGSFKSLSFSVLHGNIAQTTREHTMQRFRQGMFQILIATDIAARGLDISNVDLVVQCFPPNYAEIYIHRSGRTGRANKKGVSVVLFSNEDKQDLIKIEKNCGIKFSIEQLPNNEDVFTCASNIASKKIQNVNEDVLPFFHKTANELVEKYNNLHIDHTELVARCLALISK 585          
BLAST of mRNA_Ecto-sp13_S_contig6646.17506.1 vs. uniprot
Match: A0A6N2KC64_SALVM (RNA helicase n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2KC64_SALVM)

HSP 1 Score: 121 bits (304), Expect = 1.200e-24
Identity = 65/213 (30.52%), Postives = 116/213 (54.46%), Query Frame = 0
Query:  142 REATTANSVQNLLIEVPARQRSRVLENVVTYYSKGSHAVVITGSTAECDELADGRTFKTLTSQVLSGD----DREQTIKGFLTKGVKVLVVTHVDARGIDMSDIDLVVHYRPPRDADCYAHRSGRMEKAGRPGVTVTLCAENEMCDMRNIEQRVGFRFECRAVPSEEQMMTLAVMPARQQIKGVSDDRAEFFRGAAQELLAENNSADTELLLA 350
            +E   A  ++   I   A  +  +L ++VT Y+KG   ++ T +  + DE++   T +++ S+ L GD     RE+T+ GF      VLV T V +RG+D+ ++DL++HY  P D + + HRSGR  +AG+ G  + +   ++   +R++E+  G +FE  + P+ E+++  +       +KGV  D  EFF   AQ+L+ E  ++     LA
Sbjct:  310 QEEKLAEGIKLYAISTTATSKRTILSDLVTVYAKGGKTIIFTRTKRDADEVSMALT-QSIASEALHGDISQPQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDAGCKFEFASPPAIEELLESSAEQVAATLKGVHPDSIEFFTPTAQKLIEEQGTSALAAALA 521          
BLAST of mRNA_Ecto-sp13_S_contig6646.17506.1 vs. uniprot
Match: A0A8J4VC43_9ROSI (RNA helicase n=1 Tax=Castanea mollissima TaxID=60419 RepID=A0A8J4VC43_9ROSI)

HSP 1 Score: 119 bits (297), Expect = 1.320e-24
Identity = 64/202 (31.68%), Postives = 111/202 (54.95%), Query Frame = 0
Query:  142 REATTANSVQNLLIEVPARQRSRVLENVVTYYSKGSHAVVITGSTAECDELADGRTFKTLTSQVLSGD----DREQTIKGFLTKGVKVLVVTHVDARGIDMSDIDLVVHYRPPRDADCYAHRSGRMEKAGRPGVTVTLCAENEMCDMRNIEQRVGFRFECRAVPSEEQMMTLAVMPARQQIKGVSDDRAEFFRGAAQELLAE 339
            RE   A  ++   +   A  +  +L +++T Y+KG   +V T +  + DE++   T  ++ S+ L GD     RE+T+ GF      VLV T V ARG+D+ ++DLV+HY  P D + + HRSGR  +AG+ G  + +   ++   +R++E+ VG +FE  + P+ E+++  +       + GV  +  EFF   AQ+L+ E
Sbjct:    4 REEKLAEGIKLFALSATATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSMSLT-NSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTSSQRRTVRSLERDVGCKFEFVSAPAVEEVLESSAEHVVATLSGVHPESVEFFTPTAQKLIEE 204          
BLAST of mRNA_Ecto-sp13_S_contig6646.17506.1 vs. uniprot
Match: A0A2R6R165_ACTCC (RNA helicase n=3 Tax=Actinidia TaxID=3624 RepID=A0A2R6R165_ACTCC)

HSP 1 Score: 122 bits (305), Expect = 1.510e-24
Identity = 67/209 (32.06%), Postives = 115/209 (55.02%), Query Frame = 0
Query:  147 ANSVQNLLIEVPARQRSRVLENVVTYYSKGSHAVVITGSTAECDELADGRTFKTLTSQVLSGD----DREQTIKGFLTKGVKVLVVTHVDARGIDMSDIDLVVHYRPPRDADCYAHRSGRMEKAGRPGVTVTLCAENEMCDMRNIEQRVGFRFECRAVPSEEQMMTLAVMPARQQIKGVSDDRAEFFRGAAQELLAENNSADTELLLAK 351
            A  ++   I      +  +L ++VT+Y+KG  A+V T +  + DE++   T  ++ S+ L GD     RE+T+ GF      VLV T V ARG+D+ ++DL++HY  P D + + HRSGR  +AG+ G  + +   ++   +R++E+ VG +FE  + PS E+++ L+       + GV  +  EFF   AQ+L+ E  +      LA+
Sbjct:  334 AEGIKLYAIPTTTTSKRTILSDLVTFYAKGGKAIVFTQTKRDADEVSVALT-TSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGCKFEFISPPSVEEVLELSAEQVVATLSGVHPESVEFFTPTAQKLIEEQGTGALAAALAQ 541          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6646.17506.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLB0_ECTSI0.000e+078.74RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
D8LE98_ECTSI3.860e-7365.65RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A836CKS6_9STRA3.110e-4952.70RNA helicase (Fragment) n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JE12_9PHAE1.580e-4586.24Helicase C-terminal domain-containing protein n=1 ... [more]
A0A835ZP19_9STRA3.200e-3152.73RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S4R924_9STRA9.650e-2841.62RNA helicase n=1 Tax=Ditylum brightwellii TaxID=49... [more]
A0A1Y1JG62_PLAGO1.400e-2532.58RNA helicase n=1 Tax=Plasmodium gonderi TaxID=7751... [more]
A0A6N2KC64_SALVM1.200e-2430.52RNA helicase n=1 Tax=Salix viminalis TaxID=40686 R... [more]
A0A8J4VC43_9ROSI1.320e-2431.68RNA helicase n=1 Tax=Castanea mollissima TaxID=604... [more]
A0A2R6R165_ACTCC1.510e-2432.06RNA helicase n=3 Tax=Actinidia TaxID=3624 RepID=A0... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 983..1004
NoneNo IPR availableCOILSCoilCoilcoord: 33..130
NoneNo IPR availableGENE3D3.40.50.300coord: 144..310
e-value: 3.8E-23
score: 83.5
NoneNo IPR availablePANTHERPTHR24031:SF346DEAD (ASP-GLU-ALA-ASP) BOX HELICASE 21coord: 143..388
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 143..388
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 190..270
e-value: 2.7E-7
score: 40.2
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 171..266
e-value: 2.2E-11
score: 44.1
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 165..308
score: 14.144
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 146..301

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6646contigEcto-sp13_S_contig6646:1061..7888 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6646.17506.1mRNA_Ecto-sp13_S_contig6646.17506.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6646 1061..7888 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6646.17506.1 ID=prot_Ecto-sp13_S_contig6646.17506.1|Name=mRNA_Ecto-sp13_S_contig6646.17506.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1106bp
GKGRAPRFRLATRRSSLLKEDTGGDSGTHKDGEDGAEEDGKDQEEEEEEE
EEEEEEEEEEEEQGKEDEEVDEKVQEKEEEETGEKEEEQEDEKEEERDEE
EEADEKEEKEQEEERDEERDEEEIEEKEKEEGTSTEDGRVKREATTANSV
QNLLIEVPARQRSRVLENVVTYYSKGSHAVVITGSTAECDELADGRTFKT
LTSQVLSGDDREQTIKGFLTKGVKVLVVTHVDARGIDMSDIDLVVHYRPP
RDADCYAHRSGRMEKAGRPGVTVTLCAENEMCDMRNIEQRVGFRFECRAV
PSEEQMMTLAVMPARQQIKGVSDDRAEFFRGAAQELLAENNSADTELLLA
KCLATIARMADRKTDVAASDDEADTEEVGTEQDDSDAAEADAEQHKKEQY
PIPGGSAESVLQADTPVEDSLNDWQYLTPDDEVSISTSDAHQPSAASPSQ
PASNQVASTATPVVVRAVPERAVRAAEASTAAIRSKGKGTGGAGGGTRGS
GGGRRRRVFEEEDDNDDGDCVAVDAIKRHDSAKMGLDLSGEGDRVGVPEN
IVTGPLQVQQVQEGQAASSAPAPAAQGVSETAVKAAKASAEAVAAKNNAS
GAPGGTPGGGRGKRRRVCEEEDEDDDDDSNCIIVDADKGPESMKLGLGLS
EGGGIDGVLKDASPLEDIVAGGAAAVVGGTSGEAQHDGETQEAGEDEEGE
ALWNEDSDEEVDVAPAISKGKGKGKGKARYMARGADDDNENHSGTYSTRS
SNRRAGAGSTSGSGRHGVSVPDHSPSDDCESVTAAAAAAVPAAAAATAAA
SKTSSKSRGGASGSRGRRRPRRAAASTGINYAAFNEGLPLEDLESDDGGS
VEVTGKKRPRTTKSGSQSKPKRRRGTDELGRLQPNRSSSSSSSEEEVFGE
DCDDVAIPPTNGAPTAKGRAAGRQVPTRSRRGATPPGESPSPLRSLENTD
DGSGADTGGEEEEEDEEDESMPDRRRRKGGRKRRRVLAEEDEEEEEEEEE
EEKNPGALLFQQMQEDDPDVEDTVVATSSAALTEEEHENVMWYTYLEFLA
KAVQGGGKGAAFMEKFDSIKHAFTDYRKAIKNFEGRVCTIRESVAAGGSW
NQEFM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase