prot_Ecto-sp13_S_contig66413.17500.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig66413.17500.1
Unique Nameprot_Ecto-sp13_S_contig66413.17500.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length44
Homology
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BLAST of mRNA_Ecto-sp13_S_contig66413.17500.1 vs. uniprot
Match: A0A6H5L825_9PHAE (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L825_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 8.390e-15
Identity = 35/36 (97.22%), Postives = 35/36 (97.22%), Query Frame = 0 
Query:    6 RHYYSKAVQANPYHAVAHFNLGLLLHDEDIDTAIAH 41
            RHYYSKAVQANPYHAVAHFNLGLLLHDEDIDTAI H
Sbjct:   87 RHYYSKAVQANPYHAVAHFNLGLLLHDEDIDTAIEH 122
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig66413.17500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L825_9PHAE8.390e-1597.22Methyltransf_11 domain-containing protein n=2 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 6..44
e-value: 1.9E-6
score: 29.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 6..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig66413contigEcto-sp13_S_contig66413:468..599 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig66413.17500.1mRNA_Ecto-sp13_S_contig66413.17500.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig66413 468..599 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig66413.17500.1 ID=prot_Ecto-sp13_S_contig66413.17500.1|Name=mRNA_Ecto-sp13_S_contig66413.17500.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=44bp
HVLVVRHYYSKAVQANPYHAVAHFNLGLLLHDEDIDTAIAHYQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf