prot_Ecto-sp13_S_contig6635.17495.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6635.17495.1
Unique Nameprot_Ecto-sp13_S_contig6635.17495.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length399
Homology
BLAST of mRNA_Ecto-sp13_S_contig6635.17495.1 vs. uniprot
Match: A0A6H5L342_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L342_9PHAE)

HSP 1 Score: 591 bits (1524), Expect = 1.810e-204
Identity = 337/494 (68.22%), Postives = 347/494 (70.24%), Query Frame = 0
Query:    2 DRWVAEGNVGIQKSCGGIGGVAAAILADAAGGQGHGCEQKFPVNELLGVRRSIQGAADISSKTLQRPKTPR------------------------------------------------------------------FQSEVLVRVRPKSIQHRFLKHVHCGEFLAWSPGKWSIGEATAARCRQTFTVLAASNRAGPEVVEIGNCLATRFNVRHGYQHSTDLLQAFVEDKHIHIRDENRIDRGSEFVMNGMQTADDFDGMSVSSSHKQAAXXXXXXTGYESE---RNSSRRRLPQDDNGEATTTPCKRTVPFPRRPQPAEKPRFAPPQCTRAIRVSSATSGRRGRTKDNDPSVLVGNATCIGGEATSGERGGDDSHCGARTTRLGDDADTGVYSGGQRQGSTTAANPVGRRRVLMARMGEGLGLDLSPAIDALLHREEHLRE-----------------------------TTGEFTLPRGTEDDVDRRHDEQG 397
            DRWVAEGNVGIQKSCGG+GG+AAAILADAAGGQGHGCEQKFPVNELLGVRRSIQ AADISSKTLQRPKTPR                                                                  FQSEVLVRVRPKS+QHRFLKHVHCGEFLAWSPGKWSIGEATAARCRQTFTVLAASNRAGPEVVEIGNCLATR        HST LL+AFVEDKHI IRDENRIDRGSEFVMNGMQTADDFDGMSV SSHKQAA          S     +   RR     + EATTTPCKR VPFPRRPQP EKPRFAPPQ TRAIRVSSATS RRGRT +NDPSVLVGNAT IGGEAT G  GGDDSHCGAR T LGDD DTGV+ GGQRQGSTTAANPVGRRRVL+AR+GEGLGLDLSPAIDALLHREEHLR                              TTGE TLPRGTEDD DRRHDEQG
Sbjct:   24 DRWVAEGNVGIQKSCGGMGGIAAAILADAAGGQGHGCEQKFPVNELLGVRRSIQSAADISSKTLQRPKTPRRVHEPDVAVVLGQAHRQTGHSLSKASAISCLVLVGREEIPDTFGTGLTTHPIRGWCHVGLVTPLDRFQSEVLVRVRPKSVQHRFLKHVHCGEFLAWSPGKWSIGEATAARCRQTFTVLAASNRAGPEVVEIGNCLATR-------HHSTSLLRAFVEDKHILIRDENRIDRGSEFVMNGMQTADDFDGMSVRSSHKQAAAAAEIVLTICSAITFPSCHARRKMITHSTEATTTPCKRAVPFPRRPQPGEKPRFAPPQSTRAIRVSSATSERRGRTTENDPSVLVGNATRIGGEATGGGCGGDDSHCGARATGLGDDVDTGVHGGGQRQGSTTAANPVGRRRVLIARLGEGLGLDLSPAIDALLHREEHLRVPESHFGSSGDIPEALDENTPASRMPVSTGTTGESTLPRGTEDDADRRHDEQG 510          
BLAST of mRNA_Ecto-sp13_S_contig6635.17495.1 vs. uniprot
Match: D7G4T5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4T5_ECTSI)

HSP 1 Score: 491 bits (1264), Expect = 7.440e-167
Identity = 290/472 (61.44%), Postives = 297/472 (62.92%), Query Frame = 0
Query:    2 DRWVAEGNVGIQKSCGGIGGVAAAILADAAGGQGHGCEQKFPVNELLGVRRSIQGAADISSKTLQRPKTPR----------------------------------------------------------------------------FQSEVLVRVRPKSIQHRFLKHVHCGEFLAWSPGKWSIGEATAARCRQTFTVLAASNRAGPEVVEIGNCLATRFNVRHGYQHSTDLLQAFVEDKHIHIRDENRIDRGSEFVMNGMQTADDFDGMSVSSSHKQAAXXXXXXTGYESERNSSRRRLPQDDNGEATTTPCKRTVPFPRRPQPAEKPRFAPPQCTRAIRVSSATSGRRGRTKDNDPSVLVGNATCIGGEATSGERGGDDSHCGARTTRLGDDADTGVYSGGQRQGSTTAANPVGRRRVLMARMGEGLGLDLSPAIDALLHREEHLRETTGEFTLPRGTEDDVDRRHDEQG 397
            DRWVAEGNVGIQKSCGG+GGVAAAILADAAGGQGHGCEQKFPVNELLGVRRS+Q AADISSKTLQRPKTPR                                                                            FQSEVLVRVRPKS+QHRFLKHVHCGEF+AWSPGKWSIGEATAARCRQTFTVLAASNRAGPEVVE+GNCLATRFNVRHGYQHST LLQAFVEDKHI IRDENRIDRGSEFVMNGM TADDFDGMSV SSHKQA XXXXXX              PQ +N EATTTPCKR VPFPRRPQPAEKPRFAPPQ TRAIRVSSATS R GRTKDNDPSVLVGNATCIGGEAT G  G    HC ART                                                                E TLPRGTED+VDRRHDEQG
Sbjct:   26 DRWVAEGNVGIQKSCGGMGGVAAAILADAAGGQGHGCEQKFPVNELLGVRRSVQSAADISSKTLQRPKTPRRVHVTGVADVLGQTHRQMGHRSQHSQRSWRRKGRKCTSSGLVLVGGEEIPDTFCTGLTTHPIRGWCRAGLATTLDRFQSEVLVRVRPKSVQHRFLKHVHCGEFIAWSPGKWSIGEATAARCRQTFTVLAASNRAGPEVVEVGNCLATRFNVRHGYQHSTGLLQAFVEDKHILIRDENRIDRGSEFVMNGMHTADDFDGMSVRSSHKQAXXXXXXXXXXXXXXXXXXXXXPQGNNREATTTPCKRAVPFPRRPQPAEKPRFAPPQSTRAIRVSSATSERLGRTKDNDPSVLVGNATCIGGEATGGGCGXXXXHCXARTXXX---------------------------------------------------------XXXXESTLPRGTEDNVDRRHDEQG 440          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6635.17495.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L342_9PHAE1.810e-20468.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4T5_ECTSI7.440e-16761.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6635contigEcto-sp13_S_contig6635:4026..8093 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6635.17495.1mRNA_Ecto-sp13_S_contig6635.17495.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6635 1149..8093 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6635.17495.1 ID=prot_Ecto-sp13_S_contig6635.17495.1|Name=mRNA_Ecto-sp13_S_contig6635.17495.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=399bp
MDRWVAEGNVGIQKSCGGIGGVAAAILADAAGGQGHGCEQKFPVNELLGV
RRSIQGAADISSKTLQRPKTPRFQSEVLVRVRPKSIQHRFLKHVHCGEFL
AWSPGKWSIGEATAARCRQTFTVLAASNRAGPEVVEIGNCLATRFNVRHG
YQHSTDLLQAFVEDKHIHIRDENRIDRGSEFVMNGMQTADDFDGMSVSSS
HKQAAAAAEAATGYESERNSSRRRLPQDDNGEATTTPCKRTVPFPRRPQP
AEKPRFAPPQCTRAIRVSSATSGRRGRTKDNDPSVLVGNATCIGGEATSG
ERGGDDSHCGARTTRLGDDADTGVYSGGQRQGSTTAANPVGRRRVLMARM
GEGLGLDLSPAIDALLHREEHLRETTGEFTLPRGTEDDVDRRHDEQGIM
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