prot_Ecto-sp13_S_contig6626.17485.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6626.17485.1
Unique Nameprot_Ecto-sp13_S_contig6626.17485.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length705
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6626.17485.1 vs. uniprot
Match: A0A6H5K655_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K655_9PHAE)

HSP 1 Score: 568 bits (1464), Expect = 3.120e-197
Identity = 286/350 (81.71%), Postives = 300/350 (85.71%), Query Frame = 0 
Query:  355 VDHPDKDSDALIDARMASISDFEGEVVAWSFGDGPDVLRNHDLDFELEVPDLGRNVPALIGLCSSSAEVVDGKQCLLHPVVRCLARNGESFDPNLRLRFPLGDEASMESGSDGTSDDDDDGVAYRAYLASKFTVVTREDASSEWVPIDGTIKQAEGGVFVLEVAVPHFCDFARLQDISVPPGCMEIVPLPQLKGKPRRSHFHFVNLGEENLVAHCWGAVKKTGFWNFFRINLGAGATSGNAEFEGHRQPEDTGNGTVYSVQVPRSDPTNPKKTEVCWVSLGTESVTVAWTSQRRPQNARHRIAQVWGSSPMQHKHVMVFGPLLDIDTCQVANLRVDDNESFGKLVKSKVE 704
            +DHPD+DSDALI+ RMA+ISDFEGEVVAWSFGD PDVLRNHDLDF+LEVPDLGRNVP LIGLCSSSAEVVDGKQCLLHPVVRCLARNGESFDPNLRLR PLGDEASMESGSDG SDD    VAYRAYLASKFTVVTREDASS WVPIDGTI+QAEGGVFVLEVAVPHFCDFA  Q ISVP GCMEIVPLP+LKGKPRRSHFHFVN GEENLVAHC GAV+KTGFW+FF+INLGAGATS N                   V+ P S  TNP K+EVC V LGTESVTVAWTSQR PQNARHRI QVWG SPMQHKH MVFGPL  IDTCQV+NL+VDD ESFGKLVKSKVE
Sbjct:    1 MDHPDEDSDALINTRMAAISDFEGEVVAWSFGDSPDVLRNHDLDFDLEVPDLGRNVPTLIGLCSSSAEVVDGKQCLLHPVVRCLARNGESFDPNLRLRLPLGDEASMESGSDGASDDXXXDVAYRAYLASKFTVVTREDASSGWVPIDGTIQQAEGGVFVLEVAVPHFCDFALSQGISVPRGCMEIVPLPKLKGKPRRSHFHFVNQGEENLVAHCRGAVEKTGFWDFFKINLGAGATSAN-------------------VEDPAS--TNPNKSEVCRVFLGTESVTVAWTSQRYPQNARHRIPQVWGFSPMQHKHAMVFGPLSGIDTCQVSNLKVDDGESFGKLVKSKVE 329
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BLAST of mRNA_Ecto-sp13_S_contig6626.17485.1 vs. uniprot
Match: D8LHD4_ECTSI (Putative leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHD4_ECTSI)

HSP 1 Score: 374 bits (960), Expect = 1.820e-115
Identity = 198/346 (57.23%), Postives = 240/346 (69.36%), Query Frame = 0 
Query:  363 DALIDARMASISDFEGEVVAWSFGDGPDVLRNHDLDFELEVPDLGRNVPALIGLCSSSAEVVDGKQCLLHPVVRCLARNGESFDPNLRLRFPLGDEASMESGSDGTSDDDDDGVAYRAYLASKFTVVTREDASSEWVPIDGTIKQAEGGVFVLEVAVPHFCDFARLQDISVPPGCMEIVPLPQLKGKPRRSHFHFVNLGEENLVAHCWGAVKKTGFWNFFRINLGAGATSGNAEFEGHRQPEDTGNGTVYSVQVPRSDPTNPKKTEVCWVSLGTESVTVAWTSQRRPQ-----NARHRIAQVWGSSPMQHKHVMVFGPLLDIDTCQVANLRVDDNESFGKLVKSKV 703
            D  +D  MA IS F+G V+AWSFG  P VLR++  +FELEVP LGRNVPALIGL SSSAEVVDG++CLLHPVV CLAR+GE FDP L LRFP+GD  SMESGSD  SDD +  V YRAYL S F+ +TR+ ASSEWVP+DGTI+Q + G+FVLEV V HFCDFA  Q I V  G +E+V LPQLK K RRSH+HFVNLG ENLV HCWG  +K GF   FR+ LG G   G+AE E  R   D     VY V VP   P +  + E C V  G ES+TVA+T+Q+  +      + H + QVWG+  MQHKH M+FG L +  +  V NL+V+D  + G+LV+SKV
Sbjct:  430 DTTVDGGMAEISGFDGYVMAWSFGQHPAVLRSNGFEFELEVPRLGRNVPALIGLRSSSAEVVDGEKCLLHPVVTCLARSGEVFDPPLCLRFPVGDVNSMESGSDCGSDDAE--VTYRAYLESTFSTLTRKHASSEWVPVDGTIEQTDEGIFVLEVQVSHFCDFALKQAIKVDSGGVELVKLPQLKHKSRRSHYHFVNLGTENLVVHCWGVTRKRGFLESFRLKLGFGLNGGDAEVEATRTLVDAPGTGVYKVDVP-GGPVDDPRNEACLVVNGFESLTVAYTTQKTVRAGTLFGSTHELVQVWGTRHMQHKHAMIFGILPE--SALVPNLKVEDGVNVGELVRSKV 770
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6626.17485.1 vs. uniprot
Match: A0A6H5KIZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIZ7_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 3.620e-87
Identity = 168/344 (48.84%), Postives = 215/344 (62.50%), Query Frame = 0 
Query:  368 ARMASISDFEGEVVAWSFGDGPDVLRNHDLDFELEV-PDLGRNVPALIGL--CSSSAEVVDGKQCLLHPVVRCLARNGESFDPNLRLRFPLGDEASMESGS-DGTSDDDDDGVAYRAYLASKFTVVTREDASSEWVPIDGTIKQAEGGV-FVLEVAVPHFCDFARLQDISVPPGCMEIVPLPQLKGKPRRSHFHFVNLGEENLVAHCWGAVKKTGFWNFFRINLGAGATSGNAEFEGHRQPEDTGNGTVYSVQVPRSDPTNPKKTEVCWVSLGTESVTVAWTSQRRPQNAR----HRIAQVWGSSPMQHKHVMVFGPLLDIDTCQVANLRVDDNESFGKLVKSK 702
            ++M+S+ DF+G+VVAWSFG+  +VLR+ D +FELEV P L +N PAL+GL  CS SAE V+G+Q LLH V+ CL R GE FDP L LRFP+GDE SMESGS DG+ DD ++  AYRA+L S F+ V R+DASSEWVPI G I + +GG  F LEV + HFCDF   Q I V  G  E++ LP+     R++H+HF NLG + LV H WGA +K  F N  R N       G+   E  R   D      Y V VP  +  +  K +VC   +  E  TVAWT+Q R   +     H++ QVWGS+PM   HV+V G +    T  +ANLRVDD E  G+LV SK
Sbjct:  226 SQMSSLQDFKGDVVAWSFGNRAEVLRSPDSEFELEVQPGLNKNYPALVGLGLCSGSAEYVNGEQYLLHCVLTCLTRAGEKFDPPLLLRFPVGDEDSMESGSLDGSQDDAEE--AYRAHLQSTFSAVKRDDASSEWVPIGGDIVRMKGGRDFFLEVKISHFCDFGLSQAIDVEVGYTELIELPKKMFSSRKTHYHFANLGTKPLVFHVWGAGRKEVFVNVVRANAAVDLAGGSVGAEMERTLVDVPGSGPYEVHVP-GEAGSGSKPQVCRKFVDLEKPTVAWTTQERISPSSGVEGHQLVQVWGSTPMLSGHVLVVGAMAPDATPAIANLRVDDGEDVGRLVWSK 566
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BLAST of mRNA_Ecto-sp13_S_contig6626.17485.1 vs. uniprot
Match: A0A6H5JX36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX36_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 9.520e-17
Identity = 38/60 (63.33%), Postives = 44/60 (73.33%), Query Frame = 0 
Query:    1 MASTDRDALNDLFEATSGASWVTNLNWGTDAPLSEWHGVEVNEEGRVVKLVLDSNGLEGV 60
            MASTDRDAL  L+ AT G  W TN NW T APLS+WHGV VN++GRVV L L  N L+G+
Sbjct:    1 MASTDRDALVALYNATEGGRWSTNRNWNTGAPLSQWHGVHVNDQGRVVALELAENNLQGI 60
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6626.17485.1 vs. uniprot
Match: D8LF65_ECTSI (Hypothetical leucine-rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF65_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 3.240e-16
Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 0 
Query:    1 MASTDRDALNDLFEATSGASWVTNLNWGTDAPLSEWHGVEVNEEGRVVKLVLDSNGLEGVTPESPAALSELEALRL 76
            M++ DR AL  LF +T GA+W TN NW TDA L+ W GVEVN+EGRVV+L+L  N L G  PE+   L+EL  L +
Sbjct:    1 MSTMDRAALIALFRSTDGANWKTNSNWDTDAELATWAGVEVNDEGRVVQLILPDNNLHGPIPEALGTLNELTHLSM 76
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6626.17485.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 5.890e-15
Identity = 42/75 (56.00%), Postives = 50/75 (66.67%), Query Frame = 0 
Query:    1 MASTDRDALNDLFEATSGASWVTNLNWGTDAPLSEWHGVEVNEEGRVVKLVLDSNGLEGVTPESPAALSELEALR 75
            MA TDRDAL  L+ AT G +W  + NW TDA L  WHGV+VN++GRVVKL L  N LEG   E PA L +L  L+
Sbjct:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEG---EIPATLGQLANLQ 72
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BLAST of mRNA_Ecto-sp13_S_contig6626.17485.1 vs. uniprot
Match: D7FPS8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS8_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 6.210e-15
Identity = 45/73 (61.64%), Postives = 51/73 (69.86%), Query Frame = 0 
Query:    2 ASTDRDALNDLFEATSGASWVTNLNWGTDAPLSEWHGVEVNEEGRVVKLVLDSNGLEGVTPESPAALSELEAL 74
            ASTDRDAL  LF +T+GA+W  N NW TDA L  WHGV+VNE GRVVKL L  + L G  PE+  AL ELE L
Sbjct:  375 ASTDRDALVALFISTNGATWTCNDNWDTDAELGTWHGVDVNERGRVVKLQLGLHNLRGPIPEALVALDELEVL 447
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6626.17485.1 vs. uniprot
Match: A0A6H5JBQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBQ0_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 6.270e-15
Identity = 45/73 (61.64%), Postives = 51/73 (69.86%), Query Frame = 0 
Query:    2 ASTDRDALNDLFEATSGASWVTNLNWGTDAPLSEWHGVEVNEEGRVVKLVLDSNGLEGVTPESPAALSELEAL 74
            ASTDRDAL  LF +T+GA+W  N NW TDA L  WHGV+VNE GRVVKL L  + L G  PE+  AL ELE L
Sbjct:  401 ASTDRDALVALFISTNGANWTCNDNWDTDAELGTWHGVDVNERGRVVKLQLGLHNLRGPIPEALVALDELEVL 473
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6626.17485.1 vs. uniprot
Match: D8LFK2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK2_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 1.040e-14
Identity = 43/72 (59.72%), Postives = 47/72 (65.28%), Query Frame = 0 
Query:    1 MASTDRDALNDLFEATSGASWVTNLNWGTDAPLSEWHGVEVNEEGRVVKLVLDSNGLEGVTPESPAALSELE 72
            MA TDR AL  L+ AT GA W  N NW T A LS+WHGVEVN +GRVVKL L  N L G  P+   ALS LE
Sbjct:   71 MAQTDRKALVALYNATGGAEWKNNQNWTTSAALSQWHGVEVNTQGRVVKLSLGWNNLRGPIPKELGALSRLE 142
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6626.17485.1 vs. uniprot
Match: D7FH89_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH89_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 1.060e-14
Identity = 43/79 (54.43%), Postives = 52/79 (65.82%), Query Frame = 0 
Query:    1 MASTDRDALNDLFEATSGASWVTNLNWGTDAPLSEWHGVEVNEEGRVVKLVLDSNGLEGVTPESPAALSELEALRLIDN 79
            M+S DR AL  LF +T G  W+ N NW TDA LS+WHGVEVN+ GRVV+L L++N L G  PE+   L EL  L L  N
Sbjct:   34 MSSEDRAALVALFRSTGGTRWILNANWATDADLSKWHGVEVNQHGRVVELDLNNNNLRGTIPETLRGLKELMVLNLSCN 112
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6626.17485.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K655_9PHAE3.120e-19781.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHD4_ECTSI1.820e-11557.23Putative leucine rich repeat protein n=1 Tax=Ectoc... [more]
A0A6H5KIZ7_9PHAE3.620e-8748.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JX36_9PHAE9.520e-1763.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF65_ECTSI3.240e-1653.95Hypothetical leucine-rich repeat protein n=1 Tax=E... [more]
A0A6H5JK91_9PHAE5.890e-1556.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPS8_ECTSI6.210e-1561.64Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JBQ0_9PHAE6.270e-1561.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFK2_ECTSI1.040e-1459.72Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FH89_ECTSI1.060e-1454.43Putative Leucine Rich Repeat Protein n=1 Tax=Ectoc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 116..139
e-value: 68.0
score: 6.4
coord: 68..92
e-value: 86.0
score: 5.6
coord: 140..164
e-value: 34.0
score: 8.9
coord: 212..236
e-value: 87.0
score: 5.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 151..273
e-value: 3.8E-30
score: 106.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..150
e-value: 3.3E-36
score: 126.5
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 48..105
e-value: 1.3E-6
score: 28.1
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 118..134
e-value: 0.14
score: 12.8
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 70..93
score: 4.739
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 142..164
score: 5.248
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 94..117
score: 5.125
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 238..260
score: 5.117
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 166..188
score: 6.064
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 214..235
score: 5.656
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 118..141
score: 7.335
NoneNo IPR availablePANTHERPTHR27000:SF535LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR-RELATEDcoord: 115..308
coord: 3..186
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 3..186
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 115..308
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 21..257

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6626contigEcto-sp13_S_contig6626:681..7787 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6626.17485.1mRNA_Ecto-sp13_S_contig6626.17485.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6626 2..8099 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6626.17485.1 ID=prot_Ecto-sp13_S_contig6626.17485.1|Name=mRNA_Ecto-sp13_S_contig6626.17485.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=705bp
MASTDRDALNDLFEATSGASWVTNLNWGTDAPLSEWHGVEVNEEGRVVKL
VLDSNGLEGVTPESPAALSELEALRLIDNKLTGQIPAALCALRELKVLVL
YKNQISGCIPAELGKLSNLEHLNLSDNSLTGSIPMELRALSELHTLQLYC
NMLTGSIPKELFTCSKLETLWLNRNKLTGSIPLEIGKATALTSVKLHRNE
LSGHIPNELAALIKLEELLLANNRLSGFVPAQVVKLQSISSLDLDNNPLS
GPVPSAIELRMLRDSLFLPGDDDEAWSDEMVKKQRFKSLKSAKSSIRSSV
TSIVSACSTDMSATSGTTSSPTSSASTSTKQEEVVASSTVKQNKPPRIPQ
ARATVDHPDKDSDALIDARMASISDFEGEVVAWSFGDGPDVLRNHDLDFE
LEVPDLGRNVPALIGLCSSSAEVVDGKQCLLHPVVRCLARNGESFDPNLR
LRFPLGDEASMESGSDGTSDDDDDGVAYRAYLASKFTVVTREDASSEWVP
IDGTIKQAEGGVFVLEVAVPHFCDFARLQDISVPPGCMEIVPLPQLKGKP
RRSHFHFVNLGEENLVAHCWGAVKKTGFWNFFRINLGAGATSGNAEFEGH
RQPEDTGNGTVYSVQVPRSDPTNPKKTEVCWVSLGTESVTVAWTSQRRPQ
NARHRIAQVWGSSPMQHKHVMVFGPLLDIDTCQVANLRVDDNESFGKLVK
SKVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt