mRNA_Ecto-sp13_S_contig6607.17453.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6607.17453.1 vs. uniprot
Match: A0A6H5KBR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR9_9PHAE) HSP 1 Score: 548 bits (1413), Expect = 6.370e-186 Identity = 284/309 (91.91%), Postives = 286/309 (92.56%), Query Frame = 1
Query: 28 EPPAIPLLRSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARGCFVVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHDPSLPIPIQTTSVRLLLNLVDYIFHNDDPDLQRGKKLLQRVLK--------------------ALVYKFGTLRHYMPLVEGAERARIRHAKDIEAGAGPKL 894
EPPAIPLLRSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQ+G GVLPVCLRARYKEMIACQAR CF+VKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHDPSLPIPIQTTSVRLLLNLVDYIFHNDDPDLQRGKKLLQRVLK ALVYKFGTLRHYMPLVEGAERARIRHAKDIEAGAGPKL
Sbjct: 62 EPPAIPLLRSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQQGGGGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHDPSLPIPIQTTSVRLLLNLVDYIFHNDDPDLQRGKKLLQRVLKVEQFLFFFVDCRLCAATRHQALVYKFGTLRHYMPLVEGAERARIRHAKDIEAGAGPKL 370
BLAST of mRNA_Ecto-sp13_S_contig6607.17453.1 vs. uniprot
Match: D8LFI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI6_ECTSI) HSP 1 Score: 516 bits (1328), Expect = 2.970e-164 Identity = 269/289 (93.08%), Postives = 269/289 (93.08%), Query Frame = 1
Query: 28 EPPAIPLLRSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARGCFVVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHDPSLPIPIQTTSVRLLLNLVDYIFHNDDPDLQRGKKLLQRVLKALVYKFGTLRHYMPLVEGAERARIRHAKDIEAGAGPKL 894
EPPAIPLLRSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPV KTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHDPSLPIPIQTTSVRLLLNLVDYIFHNDDPDLQRGKKLLQRVLKALVYKFGTLRHYMPLVEGAERARIRHAKDIEAGAGPKL
Sbjct: 194 EPPAIPLLRSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPV--------------------KTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHDPSLPIPIQTTSVRLLLNLVDYIFHNDDPDLQRGKKLLQRVLKALVYKFGTLRHYMPLVEGAERARIRHAKDIEAGAGPKL 462
BLAST of mRNA_Ecto-sp13_S_contig6607.17453.1 vs. uniprot
Match: F0YHH3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHH3_AURAN) HSP 1 Score: 310 bits (795), Expect = 1.140e-92 Identity = 161/255 (63.14%), Postives = 197/255 (77.25%), Query Frame = 1
Query: 46 LLRSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARGCFVVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHDPSLPIPIQTTSVRLLLNLVDYIFHNDDPDLQRGKKLLQRVLKALVYKFGTLR 810
+L+ DSFKVLTECPLIVMLLFQLYPKYI+ NIP L PLM+ L L L R RY+E +ACQ VKTLSFLTYLLRGF+ LM+PYE+ IS +VI L+ +CP DAVATRKELLVATRHILATEFR+GFY VD +LDE +L+G GR +RD LRPLA+STLADLVHHV+ ++L Q+SRV+ +FS+N+HDP LP+ +QTTSVRLLLNLVD++FHN D D+ +G++LL +L+ LV KF TLR
Sbjct: 922 VLQGLDSFKVLTECPLIVMLLFQLYPKYIQDNIPLLTPLMMGGLALRAPLAAYK------LQRERYREFVACQ------VKTLSFLTYLLRGFSELMKPYEEAISKAVIALMIACPGDAVATRKELLVATRHILATEFRRGFYRHVDTLLDEKVLIGLGRPSRDALRPLAFSTLADLVHHVRAELNLSQLSRVVLLFSRNLHDPRLPLNVQTTSVRLLLNLVDFVFHNRDADISKGQRLLVHILQTLVSKFDTLR 1164
BLAST of mRNA_Ecto-sp13_S_contig6607.17453.1 vs. uniprot
Match: A0A8J2WWQ5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWQ5_9STRA) HSP 1 Score: 307 bits (786), Expect = 1.820e-91 Identity = 161/262 (61.45%), Postives = 199/262 (75.95%), Query Frame = 1
Query: 37 AIPLLRSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRL-APTLQRGSDGVLPVCLRARYKEMIACQARGCFVVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHDPSLPIPIQTTSVRLLLNLVDYIFHNDDPDLQRGKKLLQRVLKALVYKFGTLRHYM 819
AI L+ DSFKVLTECPLIVMLLFQLYPKYI+ NIP L PLM+ L L AP L R RYKE IACQ VKTLSFLTYLLRGF+ LM+PYE+ IS +VI L+ +CP DA++TRKELLVATRHILATEFR+GFY +D +LDE++L+G G +RDTLRPLA+STLADLVHHV+ + + Q+S V+ +FS+N+HDP+LP+ +QTTSVRLLLNLVD+IFH+ + GK+LL ++K +V KF TLR +M
Sbjct: 228 AISALQGLDSFKVLTECPLIVMLLFQLYPKYIQENIPLLTPLMMGGLALHAPILAHKLQ-------RNRYKEFIACQ------VKTLSFLTYLLRGFSELMKPYEEAISKAVITLMIACPGDAISTRKELLVATRHILATEFRRGFYQHIDTLLDENVLIGVGHPSRDTLRPLAFSTLADLVHHVRAELSISQLSCVVLLFSRNLHDPALPLNVQTTSVRLLLNLVDFIFHSGGSEKANGKRLLVHIMKTMVAKFDTLRFHM 476
BLAST of mRNA_Ecto-sp13_S_contig6607.17453.1 vs. uniprot
Match: A0A7S4DVY0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DVY0_9EUKA) HSP 1 Score: 272 bits (695), Expect = 1.490e-84 Identity = 145/259 (55.98%), Postives = 187/259 (72.20%), Query Frame = 1
Query: 46 LLRSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARGCFVVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHDPSLPIPIQTTSVRLLLNLVDYIFHNDDPDLQRGKKLLQRVLKALVYKFGTLRHYMP 822
L +S +SFKVLTECPLIVMLLFQLYP+Y++ NI LIPLM+ AL + P Y + IA Q VKTLSFLTY+LRGF MQP++ +S VI LL +CP+ ++ +RKELLVATRHILAT FRKGF+++++ ML ED+L+G GR A + +RPLAYSTLADLVHHV+ + +DQ+S+VI +FS+NIHDP+LP+ IQT SVRL+L LVD+I+ D RG+ LL R+L ALV KF TL+ Y+P
Sbjct: 52 LCKSVESFKVLTECPLIVMLLFQLYPRYVEQNIHHLIPLMMRALNIQPPTNLTQQH------SQLYSDFIAAQ------VKTLSFLTYVLRGFADRMQPHQDNLSKCVIQLLLNCPTSSINSRKELLVATRHILATNFRKGFFNKLNMMLKEDVLIGQGR-AHEIVRPLAYSTLADLVHHVRADLSIDQLSKVIYIFSRNIHDPTLPLSIQTASVRLILTLVDHIYRTSDKQ-DRGRTLLVRILSALVNKFDTLKDYIP 296
BLAST of mRNA_Ecto-sp13_S_contig6607.17453.1 vs. uniprot
Match: A0A7R9U8N6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8N6_9STRA) HSP 1 Score: 280 bits (715), Expect = 5.800e-82 Identity = 158/287 (55.05%), Postives = 198/287 (68.99%), Query Frame = 1
Query: 49 LRSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRL-APTLQRGSDGVLPVCLR---ARYKEMIACQARGCFVVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQA-RDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHDPSLPIPIQTTSVRLLLNLVDYIFHNDDPDLQRGKKLLQRVLKALVYKFGTLRHYMPLVEGAERARIRHAKDIEAGAGPKL 894
LRS +S KVL ECPLIVMLLFQLYP +I++NI L+PLM+ AL+L AP P LR RYKE +ACQ VKTLSFLTYLLR ++ L+ Y I++SVI L +CP DAVAT++ELL+ATRHILATEFR+GF S VD++LDE + G R A ++LRPLAYSTLAD VH+V+ + L Q+++V+ +F +NIHD SLP+ IQ TSVRLLLN++DYIFH D Q+GK LLQR+LK L K TL Y+PL+ E R + EAG P L
Sbjct: 182 LRSIESCKVLIECPLIVMLLFQLYPAFIQSNIKHLLPLMVRALKLRAP----------PNALRMQETRYKEFVACQ------VKTLSFLTYLLRSYSQLLLEYRSDIATSVITLFLNCPVDAVATKRELLIATRHILATEFREGFKSHVDKLLDERTVFGVRRHAPAESLRPLAYSTLADFVHYVRGELTLRQLAKVVHIFGRNIHDSSLPLSIQVTSVRLLLNVIDYIFHKHTDDPQKGKVLLQRILKTLTTKVDTLGIYIPLLYEDETERKTERRISEAGPAPLL 452
BLAST of mRNA_Ecto-sp13_S_contig6607.17453.1 vs. uniprot
Match: A0A8J6CBB9_DIALT (FAT domain-containing protein n=4 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CBB9_DIALT) HSP 1 Score: 264 bits (675), Expect = 1.410e-76 Identity = 148/269 (55.02%), Postives = 187/269 (69.52%), Query Frame = 1
Query: 37 AIPLLRSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARGCFVVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVG----PG-RQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHDPSLPIPIQTTSVRLLLNLVDYIFHNDDPDLQRGKKLLQRVLKALVYKFGTLRHYMPLV 828
A+ L +S +SFKVLTECPLIVMLLFQLYP YI+A IP+LIPLM+ AL L G P R +Y + +A Q VKTLSFLTYLLR F M Y++ I VI LL + P+D+ + RK++L+ATRHILAT+FR GF+S VD +L+E+LL+G PG R + + LRPLA STLADLVHHV+ + + Q+SRV+ +F+KNIHDPSLP+ I TTSVRLLLNLV+ IF D D + LL R+L LV KF TLR ++P V
Sbjct: 447 AVRLTKSTESFKVLTECPLIVMLLFQLYPSYIQATIPELIPLMVSALALRA-------GPPPPAQRVQYADCMAAQ------VKTLSFLTYLLRAFADFMSSYQESIPKCVIQLLHAAPADSASIRKDVLIATRHILATDFRTGFFSHVDALLNEELLLGGRVSPGSRSSHEALRPLACSTLADLVHHVRGALSMGQLSRVVHLFAKNIHDPSLPLSIHTTSVRLLLNLVENIFLKADAD---SRALLVRILDTLVNKFSTLRRHIPRV 699
BLAST of mRNA_Ecto-sp13_S_contig6607.17453.1 vs. uniprot
Match: A0A6G0X4X9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X4X9_9STRA) HSP 1 Score: 253 bits (646), Expect = 1.590e-76 Identity = 130/284 (45.77%), Postives = 184/284 (64.79%), Query Frame = 1
Query: 43 PLLRSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARGCFVVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHDPSLPIPIQTTSVRLLLNLVDYIFHNDDPDLQRGKKLLQRVLKALVYKFGTLRHYMPLVEGAERARIRHAKDIEAGAGPKL 894
PL +SFK + E PLI+MLLFQ YP YI+ IP L+PLM+ L L + + P +Y + + CQ VKTLSF+TYLLRGF LM+P++ I + + LL +CP DA RK++ VA RHIL+T+FR+GFY +++ ++D+D+L+G GR + +RPLAYSTLAD++HHV+D + L QVS+++ + K IHDP+LP+PIQTT++RLLLNLVD N+D D RG+ +L R+L + KFGT +P+V R +E GA K+
Sbjct: 283 PLCPGIESFKTMAEFPLIIMLLFQCYPNYIENYIPILVPLMMSTLSLR--CPEHAPKIYPT----KYVDFLDCQ------VKTLSFVTYLLRGFANLMRPFQDTICENTVKLLMACPKDAFVLRKDIFVAARHILSTDFRRGFYPQLEILMDDDVLIGKGRCSYYQIRPLAYSTLADMIHHVRDMLTLTQVSKIVSFYGKRIHDPTLPVPIQTTAIRLLLNLVDISAKNEDSDGWRGRNILSRILLTIASKFGTTLKNLPVVLSMPSNNDRLIDPLEGGAMDKI 554
BLAST of mRNA_Ecto-sp13_S_contig6607.17453.1 vs. uniprot
Match: A0A2R6XKQ8_MARPO (Uncharacterized protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XKQ8_MARPO) HSP 1 Score: 263 bits (673), Expect = 2.580e-76 Identity = 139/265 (52.45%), Postives = 192/265 (72.45%), Query Frame = 1
Query: 55 SKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARGCFVVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHDPSLPIPIQTTSVRLLLNLVDYIFHN--DDPDLQRGKKLLQRVLKALVYKFGTLRHYMP-LVEGAE 840
S SFKV+TECPLIVM LFQLYP+Y++ NIP L+PLM++A+ + Q +P L+ + E+ Q VKT+SFLTYLL+ F ++ +E+ IS S++NLL SCP D+V+ RKELLVATRH+LAT+FR+GF+S++D +LDE +LVG GR +TLRPLAYS LA+L+HHV+ + L Q+SR++ +FS+N+HD SLP+ +QTT VRL+LNLV+ IF D + G+ LL R+L A V KFGTL+H +P L+EG +
Sbjct: 195 STRSFKVVTECPLIVMFLFQLYPRYLQTNIPLLLPLMVNAISITGPSQ------VPTNLKNAFAELKGAQ------VKTVSFLTYLLKSFADCIRSHEESISKSIVNLLVSCP-DSVSIRKELLVATRHVLATDFRRGFFSQIDTLLDERVLVGTGRACYETLRPLAYSLLAELIHHVRLDLSLPQLSRIVYLFSRNVHDSSLPLSVQTTCVRLMLNLVETIFSRRVDQHSKEEGRALLGRILDAFVSKFGTLKHMIPQLLEGGD 446
BLAST of mRNA_Ecto-sp13_S_contig6607.17453.1 vs. uniprot
Match: A0A1Y1I709_KLENI (Phosphatidylinositol 3-and 4-kinase family protein with FAT domain n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I709_KLENI) HSP 1 Score: 261 bits (668), Expect = 1.210e-75 Identity = 139/266 (52.26%), Postives = 192/266 (72.18%), Query Frame = 1
Query: 31 PPAIPLLRSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARGCFVVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHDPSLPIPIQTTSVRLLLNLVDYIFHN--DDPDLQRGKKLLQRVLKALVYKFGTLRHYMP 822
PP L S SFKV+TECPLIVM LFQLYP+++ NIP L+PLM+ + + G + V P L+ + ++ A Q VKT+SF+TYLLR F+ ++PY + +S S++NLL +CP D++ATRKELLVATRH+LAT+FRKGF++ +D +LDE +LVG GR +TLRPLAYS LA+L+HHV+ + L Q+SR+I +FSKN+HD SLP+ +QTT VRL+LNLV+ IF D+ + + G++LL+R+L V KFGTLR +P
Sbjct: 249 PPLGQLNPSVRSFKVVTECPLIVMFLFQLYPRFLGVNIPTLLPLMVTTISIP-----GPNNV-PPHLKQTFSDLKAAQ------VKTVSFMTYLLRSFSDDIRPYTENVSKSIVNLLVTCP-DSIATRKELLVATRHVLATDFRKGFFTHIDILLDERVLVGTGRSCYETLRPLAYSLLAELIHHVRIDLSLQQLSRIIYLFSKNVHDHSLPLSVQTTCVRLMLNLVETIFSRRMDERNKEEGRQLLRRILDCFVSKFGTLRRAIP 501 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6607.17453.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6607.17453.1 >prot_Ecto-sp13_S_contig6607.17453.1 ID=prot_Ecto-sp13_S_contig6607.17453.1|Name=mRNA_Ecto-sp13_S_contig6607.17453.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=298bp GTAAAAAAAEPPAIPLLRSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDback to top mRNA from alignment at Ecto-sp13_S_contig6607:378..3563+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6607.17453.1 ID=mRNA_Ecto-sp13_S_contig6607.17453.1|Name=mRNA_Ecto-sp13_S_contig6607.17453.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3186bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6607:378..3563+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6607:378..3563+ >mRNA_Ecto-sp13_S_contig6607.17453.1 ID=mRNA_Ecto-sp13_S_contig6607.17453.1|Name=mRNA_Ecto-sp13_S_contig6607.17453.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=894bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6607:378..3563+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |