prot_Ecto-sp13_S_contig65916.17432.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig65916.17432.1
Unique Nameprot_Ecto-sp13_S_contig65916.17432.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length123
Homology
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BLAST of mRNA_Ecto-sp13_S_contig65916.17432.1 vs. uniprot
Match: A0A6H5JHG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHG2_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 2.100e-57
Identity = 108/129 (83.72%), Postives = 111/129 (86.05%), Query Frame = 0 
Query:    1 MSIDVAAIRASHEANQLNAQGPGGRDSAAPPGEPQNARSIGAAGNGTQEAGVQAPAPAGPPNARWFTWFTDPIGAAVNGMGGGLPGMGETAPHGTDAAVHDMEEAXXXXXXXX-------ALDDREEPQ 122
            MSIDVAAIRASHEANQLNAQGPG R+SAAPPG PQNAR IGAAGNG QEAGVQAPAPAGP NARWFTW TDP+GAA NGMGGGLPGM ET  HGTDAAV+DMEE XXXXXXXX       ALDDREEPQ
Sbjct:   65 MSIDVAAIRASHEANQLNAQGPGRRESAAPPGGPQNARPIGAAGNGMQEAGVQAPAPAGPQNARWFTWLTDPVGAAFNGMGGGLPGMEETPTHGTDAAVNDMEEXXXXXXXXXXXXXXXXALDDREEPQ 193
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BLAST of mRNA_Ecto-sp13_S_contig65916.17432.1 vs. uniprot
Match: D7FSQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSQ8_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 2.510e-38
Identity = 88/125 (70.40%), Postives = 89/125 (71.20%), Query Frame = 0 
Query:    1 MSIDVAAIRASHEANQLNAQGPGGRDSAAPPGEP---QNARSIGAAGNGTQEAGVQAPAPAGPPNARWFTWFTDPIGAAVNGMGGGLPGMGETAPHGTDAAVHDMEEAXXXXXXXXALDDREEPQ 122
            MSIDVAAIRASHEANQLNAQGPGG +SA PPG P   QNAR I                      A WFTW TDPIGAA NGMGGGLPGM ETAPHGTDAAV DMEE XXXXXXXX LDDREEPQ
Sbjct:   66 MSIDVAAIRASHEANQLNAQGPGGMESAHPPGGPRGPQNARPIXXXXXXXXXXXXXXXXXXXXXXAGWFTWLTDPIGAAFNGMGGGLPGMEETAPHGTDAAVSDMEEXXXXXXXXXXLDDREEPQ 190
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BLAST of mRNA_Ecto-sp13_S_contig65916.17432.1 vs. uniprot
Match: A0A6H5JEM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM0_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 3.720e-7
Identity = 28/58 (48.28%), Postives = 34/58 (58.62%), Query Frame = 0 
Query:   48 QEAGVQAPAPAGPPNARWFTWFTDPIGAAVNGMGGGLPGMGETAPHGTDAAVHDMEEA 105
            QEA  Q+PAPAGP  A WFTW TDP GAA N +G              +AA++DM +A
Sbjct:    2 QEAAAQSPAPAGPQYAPWFTWLTDPFGAAFNDLG--------------EAALYDMADA 45
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig65916.17432.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JHG2_9PHAE2.100e-5783.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSQ8_ECTSI2.510e-3870.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEM0_9PHAE3.720e-748.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig65916contigEcto-sp13_S_contig65916:320..688 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig65916.17432.1mRNA_Ecto-sp13_S_contig65916.17432.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig65916 299..688 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig65916.17432.1 ID=prot_Ecto-sp13_S_contig65916.17432.1|Name=mRNA_Ecto-sp13_S_contig65916.17432.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=123bp
MSIDVAAIRASHEANQLNAQGPGGRDSAAPPGEPQNARSIGAAGNGTQEA
GVQAPAPAGPPNARWFTWFTDPIGAAVNGMGGGLPGMGETAPHGTDAAVH
DMEEAASHNVEEAALDDREEPQ*
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