mRNA_Ecto-sp13_S_contig65765.17404.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig65765.17404.1
Unique NamemRNA_Ecto-sp13_S_contig65765.17404.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig65765.17404.1 vs. uniprot
Match: D7G934_ECTSI (Haloacid dehalogenase-like hydrolase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G934_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 1.290e-14
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 1 
Query:    1 DTVKALRRAGKRTFFVTNNSSKSRRQYCVKLEGFG 105
            DTVKALRRAGKRTFFVTNNSSKSRRQYCVKLEGFG
Sbjct:   53 DTVKALRRAGKRTFFVTNNSSKSRRQYCVKLEGFG 87
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BLAST of mRNA_Ecto-sp13_S_contig65765.17404.1 vs. uniprot
Match: A0A836CPG6_9STRA (Haloacid dehalogenase-like hydrolase family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPG6_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 2.730e-6
Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = 1 
Query:    1 DTVKALRRAGKRTFFVTNNSSKSRRQYCVKLEGFG 105
            +T+ ALR AGKR  F+TNNSSKSRRQY  K   FG
Sbjct:   62 ETLDALRAAGKRVLFITNNSSKSRRQYAAKFAAFG 96
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BLAST of mRNA_Ecto-sp13_S_contig65765.17404.1 vs. uniprot
Match: A0A1Y1HSH8_KLENI (2-phosphoglycolate phosphatase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HSH8_KLENI)

HSP 1 Score: 50.1 bits (118), Expect = 5.190e-6
Identity = 23/35 (65.71%), Postives = 28/35 (80.00%), Query Frame = 1 
Query:    1 DTVKALRRAGKRTFFVTNNSSKSRRQYCVKLEGFG 105
            DT+ AL+RAGKR F+VTNN+SKSRRQY  K+   G
Sbjct:  123 DTLAALQRAGKRLFYVTNNASKSRRQYSEKIRRLG 157
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BLAST of mRNA_Ecto-sp13_S_contig65765.17404.1 vs. uniprot
Match: A0A7E6EHW8_OCTVU (4-nitrophenylphosphatase-like isoform X2 n=2 Tax=Octopus TaxID=6643 RepID=A0A7E6EHW8_OCTVU)

HSP 1 Score: 48.1 bits (113), Expect = 7.340e-6
Identity = 20/35 (57.14%), Postives = 25/35 (71.43%), Query Frame = 1 
Query:    1 DTVKALRRAGKRTFFVTNNSSKSRRQYCVKLEGFG 105
            DTVK L++ GK   FVTNNS+KSR+ YC+K    G
Sbjct:   38 DTVKKLKKLGKNVLFVTNNSTKSRKDYCIKFSQLG 72
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BLAST of mRNA_Ecto-sp13_S_contig65765.17404.1 vs. uniprot
Match: A0A7E6EIU7_OCTVU (4-nitrophenylphosphatase-like isoform X1 n=1 Tax=Octopus vulgaris TaxID=6645 RepID=A0A7E6EIU7_OCTVU)

HSP 1 Score: 48.1 bits (113), Expect = 7.840e-6
Identity = 20/35 (57.14%), Postives = 25/35 (71.43%), Query Frame = 1 
Query:    1 DTVKALRRAGKRTFFVTNNSSKSRRQYCVKLEGFG 105
            DTVK L++ GK   FVTNNS+KSR+ YC+K    G
Sbjct:   42 DTVKKLKKLGKNVLFVTNNSTKSRKDYCIKFSQLG 76
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BLAST of mRNA_Ecto-sp13_S_contig65765.17404.1 vs. uniprot
Match: A0A6P7T0D1_OCTVU (4-nitrophenylphosphatase n=1 Tax=Octopus vulgaris TaxID=6645 RepID=A0A6P7T0D1_OCTVU)

HSP 1 Score: 47.8 bits (112), Expect = 2.020e-5
Identity = 20/35 (57.14%), Postives = 25/35 (71.43%), Query Frame = 1 
Query:    1 DTVKALRRAGKRTFFVTNNSSKSRRQYCVKLEGFG 105
            DTVK L++ GK   FVTNNS+KSR+ YC+K    G
Sbjct:   31 DTVKKLKKLGKNVLFVTNNSTKSRKAYCIKFSQLG 65
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BLAST of mRNA_Ecto-sp13_S_contig65765.17404.1 vs. uniprot
Match: A0A1V6TVN9_9EURO (Uncharacterized protein n=1 Tax=Penicillium steckii TaxID=303698 RepID=A0A1V6TVN9_9EURO)

HSP 1 Score: 48.1 bits (113), Expect = 2.490e-5
Identity = 21/35 (60.00%), Postives = 27/35 (77.14%), Query Frame = 1 
Query:    1 DTVKALRRAGKRTFFVTNNSSKSRRQYCVKLEGFG 105
            +T++ LR+ GK+  FVTNNS+KSR  YC KLEG G
Sbjct:   91 ETLELLRKNGKQVVFVTNNSTKSRADYCKKLEGLG 125
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BLAST of mRNA_Ecto-sp13_S_contig65765.17404.1 vs. uniprot
Match: A0A0F7ZM82_9HYPO (4-nitrophenylphosphatase n=1 Tax=Hirsutella minnesotensis 3608 TaxID=1043627 RepID=A0A0F7ZM82_9HYPO)

HSP 1 Score: 47.0 bits (110), Expect = 6.320e-5
Identity = 21/35 (60.00%), Postives = 27/35 (77.14%), Query Frame = 1 
Query:    1 DTVKALRRAGKRTFFVTNNSSKSRRQYCVKLEGFG 105
            +T++ LR  GKRT FVTNNS+KSR++Y  KL G G
Sbjct:   45 ETLELLRSRGKRTIFVTNNSTKSRQEYVKKLNGLG 79
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BLAST of mRNA_Ecto-sp13_S_contig65765.17404.1 vs. uniprot
Match: A0A1V6PIS2_PENDC (4-nitrophenylphosphatase n=1 Tax=Penicillium decumbens TaxID=69771 RepID=A0A1V6PIS2_PENDC)

HSP 1 Score: 47.0 bits (110), Expect = 6.340e-5
Identity = 20/35 (57.14%), Postives = 27/35 (77.14%), Query Frame = 1 
Query:    1 DTVKALRRAGKRTFFVTNNSSKSRRQYCVKLEGFG 105
            +T++ LR+ GK+  FVTNNS+KSR  YC KL+G G
Sbjct:   52 ETLELLRKNGKQVVFVTNNSTKSRADYCKKLQGLG 86
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BLAST of mRNA_Ecto-sp13_S_contig65765.17404.1 vs. uniprot
Match: A0A2C5ZG97_9HYPO (4-nitrophenylphosphatase n=1 Tax=Cordyceps sp. RAO-2017 TaxID=2004951 RepID=A0A2C5ZG97_9HYPO)

HSP 1 Score: 46.6 bits (109), Expect = 8.660e-5
Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = 1 
Query:    1 DTVKALRRAGKRTFFVTNNSSKSRRQYCVKLEGFG 105
            +T+K LR  GKRT FVTNNS+KSR +Y  KL G G
Sbjct:   45 ETLKLLRTKGKRTIFVTNNSTKSRGEYVKKLGGLG 79
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig65765.17404.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G934_ECTSI1.290e-14100.00Haloacid dehalogenase-like hydrolase family protei... [more]
A0A836CPG6_9STRA2.730e-665.71Haloacid dehalogenase-like hydrolase family protei... [more]
A0A1Y1HSH8_KLENI5.190e-665.712-phosphoglycolate phosphatase n=1 Tax=Klebsormidi... [more]
A0A7E6EHW8_OCTVU7.340e-657.144-nitrophenylphosphatase-like isoform X2 n=2 Tax=O... [more]
A0A7E6EIU7_OCTVU7.840e-657.144-nitrophenylphosphatase-like isoform X1 n=1 Tax=O... [more]
A0A6P7T0D1_OCTVU2.020e-557.144-nitrophenylphosphatase n=1 Tax=Octopus vulgaris ... [more]
A0A1V6TVN9_9EURO2.490e-560.00Uncharacterized protein n=1 Tax=Penicillium stecki... [more]
A0A0F7ZM82_9HYPO6.320e-560.004-nitrophenylphosphatase n=1 Tax=Hirsutella minnes... [more]
A0A1V6PIS2_PENDC6.340e-557.144-nitrophenylphosphatase n=1 Tax=Penicillium decum... [more]
A0A2C5ZG97_9HYPO8.660e-562.864-nitrophenylphosphatase n=1 Tax=Cordyceps sp. RAO... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig65765contigEcto-sp13_S_contig65765:542..646 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score73.2
Seed ortholog evalue2.8e-11
Seed eggNOG ortholog2880.D7G934
Model size105
KEGG rclassRC00017,RC00151
KEGG koko:K01101,ko:K19269
KEGG ReactionR01334,R03024
KEGG Pathwayko00627,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,map00627,map00630,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00532
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
EggNOG free text desc.phosphoglycolate phosphatase activity
EggNOG OGsCOG0647@1,KOG2882@2759
EC3.1.3.18,3.1.3.41,3.1.3.48
Cds size105
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463905.9407718-CDS-Ecto-sp13_S_contig65765:541..6461681463905.9407718-CDS-Ecto-sp13_S_contig65765:541..646Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig65765 542..646 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig65765.17404.1prot_Ecto-sp13_S_contig65765.17404.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig65765 542..646 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig65765.17404.1

>prot_Ecto-sp13_S_contig65765.17404.1 ID=prot_Ecto-sp13_S_contig65765.17404.1|Name=mRNA_Ecto-sp13_S_contig65765.17404.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=35bp
DTVKALRRAGKRTFFVTNNSSKSRRQYCVKLEGFG
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mRNA from alignment at Ecto-sp13_S_contig65765:542..646+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig65765.17404.1 ID=mRNA_Ecto-sp13_S_contig65765.17404.1|Name=mRNA_Ecto-sp13_S_contig65765.17404.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=105bp|location=Sequence derived from alignment at Ecto-sp13_S_contig65765:542..646+ (Ectocarpus species13 EcNAP12_S_4_19m)
GACACGGTGAAGGCGCTACGGCGTGCCGGCAAGCGCACCTTCTTCGTGAC
GAATAACTCAAGCAAGAGCCGAAGACAGTACTGTGTCAAGCTCGAGGGCT
TCGGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig65765:542..646+

>mRNA_Ecto-sp13_S_contig65765.17404.1 ID=mRNA_Ecto-sp13_S_contig65765.17404.1|Name=mRNA_Ecto-sp13_S_contig65765.17404.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=105bp|location=Sequence derived from alignment at Ecto-sp13_S_contig65765:542..646+ (Ectocarpus species13 EcNAP12_S_4_19m)
GACACGGTGAAGGCGCTACGGCGTGCCGGCAAGCGCACCTTCTTCGTGAC
GAATAACTCAAGCAAGAGCCGAAGACAGTACTGTGTCAAGCTCGAGGGCT
TCGGG
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