mRNA_Ecto-sp13_S_contig6569.17399.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6569.17399.1
Unique NamemRNA_Ecto-sp13_S_contig6569.17399.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Match: A0A6H5JDK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDK4_9PHAE)

HSP 1 Score: 506 bits (1302), Expect = 2.060e-178
Identity = 241/265 (90.94%), Postives = 251/265 (94.72%), Query Frame = 2
Query:    2 FAVCNVGSSCRGEYNRANGTLNKMWQEETGIAWKRINSERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAFLMEWYHSQMENKMPVTEKWAPDNTYVNHWEVDTKMTTAPMRIHRRLYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQENVDSEWGLYVRGHDGVAKELFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVTANDVERAAKLGKTQKRQQESATDEKAKA 796
            FAVCNVGSSCRGEYNRANGTLNKMWQEE GI WKRINSERSRV LNEYQPVTVPK+TELGYKKEKLNPDTYA+LMEWYHSQMENK PVTEKWAPDNTYVNHWEVDTKMT AP RIHRRLYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIIN   ENVD++WGLYVRGHDGVA++LFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVT  DV+RAA LGKTQK  +ESATD+KA+A
Sbjct:   41 FAVCNVGSSCRGEYNRANGTLNKMWQEEIGIVWKRINSERSRVMLNEYQPVTVPKFTELGYKKEKLNPDTYAYLMEWYHSQMENKAPVTEKWAPDNTYVNHWEVDTKMTAAPTRIHRRLYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIIN---ENVDTDWGLYVRGHDGVARDLFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVTTKDVQRAANLGKTQKGHEESATDKKARA 302          
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Match: D7FHL7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL7_ECTSI)

HSP 1 Score: 457 bits (1177), Expect = 1.010e-159
Identity = 228/265 (86.04%), Postives = 231/265 (87.17%), Query Frame = 2
Query:    2 FAVCNVGSSCRGEYNRANGTLNKMWQEETGIAWKRINSERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAFLMEWYHSQMENKMPVTEKWAPDNTYVNHWEVDTKMTTAPMRIHRRLYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQENVDSEWGLYVRGHDGVAKELFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVTANDVERAAKLGKTQKRQQESATDEKAKA 796
            FAVCNVGSSCR EYNRANGTLNKMW EETGIA KRIN ER+RVKLNEYQPVTVPK+TELGYKKEKLNPDTYA+LMEWYH QMENKMPVTEKWA DNTYVNHWEV TKMTTAPMRIHRRLYQDLLPVMEEWSG KLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQ                        PGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVTAN VERAAK GKTQKRQQESATDEKAKA
Sbjct:   41 FAVCNVGSSCRDEYNRANGTLNKMWPEETGIAPKRINGERNRVKLNEYQPVTVPKFTELGYKKEKLNPDTYAYLMEWYHGQMENKMPVTEKWALDNTYVNHWEVGTKMTTAPMRIHRRLYQDLLPVMEEWSGTKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQ------------------------PGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVTANTVERAAKFGKTQKRQQESATDEKAKA 281          
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Match: A0A7S4KHC4_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KHC4_9EUKA)

HSP 1 Score: 179 bits (453), Expect = 1.910e-49
Identity = 92/219 (42.01%), Postives = 129/219 (58.90%), Query Frame = 2
Query:   62 LNKMWQEETGIAWKRINSERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAFLMEWYHSQMENKMPVT-EKWAPDNTYVNHWEVDTKMTTAPMRIHRRLYQDLLPVMEEWSG--IKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQENVDSEWGLYVRGHDGVAKELFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDV 709
            L  +   E  +  +R  +E+ R+ LN  QP+  PK+TE+GY   KL+   +  L  +YH   +NK   T E W P + +VNHWE  T M      + +R+    +P++E W G    L+ TA YG+R Y   S L NHVDR  TH +S II V+Q+  D +W L V GHDG  +EL + PG+++ YESASVIHGRP+   G  +AN+FVHF P  GW++
Sbjct:  139 LQNLTPGEKAVLLQRKENEKRRIWLNRNQPLKTPKFTEVGYAYSKLSDSLFDDLFNYYH---DNKHRQTFENWRPADHHVNHWESPTYMLPLTQSLRQRVIDYCVPILETWIGGETPLEFTALYGIRTYSNESYLLNHVDRSATHAVSVIIQVDQKVTD-DWLLEVHGHDGKVEELPMAPGQMVLYESASVIHGRPKPLNGEYYANVFVHFRPKNGWNL 353          
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Match: A0A835YWU1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWU1_9STRA)

HSP 1 Score: 170 bits (431), Expect = 3.480e-45
Identity = 82/200 (41.00%), Postives = 125/200 (62.50%), Query Frame = 2
Query:  104 RINSERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAFLMEWYHSQMENKMPVTEKWAPDNTYVNHWEVDTKMTTAPMR--IHRRLYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQENVDSEWGLYVRGHDGVAKELFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAE 697
            R  +E+ RV+ N  QPV +P++T++G+KK ++  D +  L+ +Y    +N  P  E+W   N Y N+ E  + M   P    +   ++  L P++EEWSG++L ST+CYG+R Y RGS LANHVD   TH ISAIINV+QE V+ +W L +  H G    + + P +++ YESA+ +HGRP  F G  +AN+F+H+ P +
Sbjct:  260 REQNEKFRVRNNVQQPVGLPRFTDVGFKKIRVPDDVWDMLVTYYRQNKQN--PKIERWGKGNVYTNNLEAPSYMVNLPETGPLKPAIFNGLRPILEEWSGVELVSTSCYGIRAYTRGSWLANHVDTRATHTISAIINVDQE-VNKDWPLNIFDHAGNDHNITMAPRDMVLYESATCVHGRPSTFDGQFYANMFIHYKPTD 456          
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Match: A0A7S2UT49_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT49_9STRA)

HSP 1 Score: 165 bits (417), Expect = 5.270e-43
Identity = 82/204 (40.20%), Postives = 126/204 (61.76%), Query Frame = 2
Query:   98 WKRINS-ERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAFLMEWYHSQMENKMPVTEKWAPDNTYVNHWEVDTKMTTAPM--RIHRRLYQDLLPVMEEWSGI-KLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQENVDSEWGLYVRGHDGVAKELFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAE 697
            ++R N+ +R R++ N+  P  VP +TE+G++K +  PD +  +  +YH+  E+     E W   NTY NH+E  T M   P   R+   +++ L P +EEWSG+ +L+ TACYG+R Y  G+ L  HVDR+ TH IS IINV+Q+ V+  W L++  H G A  + + PG+++ YESAS  HGRP   +G+ + N FVH+ P +
Sbjct:  271 YRRQNATDRERIRHNKEHPSIVPHFTEVGFEKVRTPPDVWEMIQTYYHANKEHT--ALEVWDDSNTYTNHFESPTYMIHLPENGRMKPEIFRRLQPYLEEWSGVDELEGTACYGIRVYQEGAELRGHVDRISTHAISVIINVDQD-VEEPWYLHIYDHSGSAHNVTMAPGDMVLYESASCQHGRPFPLKGNYYTNTFVHYRPKD 471          
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Match: A0A7S2THP0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2THP0_9EUKA)

HSP 1 Score: 159 bits (403), Expect = 5.520e-42
Identity = 91/261 (34.87%), Postives = 134/261 (51.34%), Query Frame = 2
Query:    2 FAVCNVGSSCRGEYN------RANGTLNKMWQEETGIAWKRINSERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAFLMEWYHSQMENKMPVTEKWAPDNTYVNHWEVDTKMTTAPMRIH------RRLYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQENVDSEWGLYVRGHDGVAKELFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVTANDVERAAKLGK 748
            F+V   G  C   Y       R +G + +   +     W   N +R +   N  QP  +  +TELG++K K+  D +  L  +Y +  ++   V EKW   N Y+NHWE    M   P  +H      R++++ L P +EEWSG +L+ T  YG+R Y   + L NHVDRV THV+SAI+++  +  D  W L +  H G    + I PGE++ YESA+ +HGRP  FQG  + N F HF P + W      + +  KL K
Sbjct:   95 FSVAQCGHPCHEHYGEEPCLERLDGRIRRAQLQPV---WDSQNEDRRQT--NRIQPQNLKNFTELGFEKRKIPDDVWELLRSYYENNKDSI--VLEKWPSTNPYINHWESVPFMIWLP-ELHTGDETKRKIFEGLRPHLEEWSGTELEHTDLYGMRVYKNNTFLENHVDRVATHVVSAIMHIADKQ-DIPWPLNIYDHYGNEHNITISPGEMVLYESATCVHGRPSLFQGEYYVNAFAHFRP-KNWISHLRGLRKKGKLTK 345          
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Match: A0A7S2MSB8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MSB8_9STRA)

HSP 1 Score: 159 bits (402), Expect = 8.280e-41
Identity = 84/200 (42.00%), Postives = 121/200 (60.50%), Query Frame = 2
Query:  113 SERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAFLMEWYHSQMENKMPVTEKWAPDNTYVNHWEVDTKMTTAPMRIHRRLYQDLLPVMEEWSG-IKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQENVDSEWGLYVRGHDGVAKELFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDV 709
            S  +R+ L++ Q   VP  TE G+ K++L P T+A + ++Y       M   E++     Y N   + T  T  P R+   ++ +L  +ME W+G +KLK T+CYGVR Y  GS L  HVD   THVIS I+NV QE V   W L +  H+G   E+ ++PG+++FYESA ++HGRPQ  +G  +ANIFVH+ P +GWDV
Sbjct:  292 SLETRMALSDVQSHFVPSLTEEGFYKDRLPPTTFARVTKFYEENYNTSM-TNEEYDGGPLY-NQRTIPTYHTPLPHRLQNDIFMELKDLMEVWAGGMKLKGTSCYGVRTYSPGSYLHLHVDTAQTHVISGIVNVAQE-VSKPWPLEILDHEGKLHEVNMDPGDLLFYESAKLLHGRPQPLEGQFYANIFVHYVPEKGWDV 488          
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Match: A0A7S1YWR3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YWR3_TRICV)

HSP 1 Score: 152 bits (384), Expect = 9.360e-41
Identity = 77/200 (38.50%), Postives = 121/200 (60.50%), Query Frame = 2
Query:  116 ERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAFLMEWYHSQMENKMPVTEKWAPDNTYVNHWEVDTKMTTAP--------MRIHRRLYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQENVDSEWGLYVRGHDGVAKELFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSP 691
            E  R+ +N +QP  +  YT LG++K +     Y  L  ++ +   +++  TE W+  +TY+NHW++ T+M              +  +++      ++EW G  L +++ YG+R Y RG++LA HVDR+   V SAIINV+Q+ V++ W L V  HDGVA  + +EPG+++ YES SV+HGRP   QGS +AN+FVHF P
Sbjct:   17 ESDRISMNLWQPRLMQNYTTLGFRKVRAPEKVYRLLRAFWRANRNSRL--TEAWSEGDTYLNHWDMPTQMVNVDNPRLSGGGKELEWKIWDATREAIQEWIGKPLSTSSVYGIRIYRRGAVLAPHVDRLPL-VSSAIINVDQD-VNAPWPLEVIAHDGVAYNVTMEPGDMVLYESHSVVHGRPYPLQGSFYANVFVHFEP 212          
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Match: B8CBJ8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBJ8_THAPS)

HSP 1 Score: 156 bits (395), Expect = 1.200e-39
Identity = 86/208 (41.35%), Postives = 123/208 (59.13%), Query Frame = 2
Query:   98 WKRINSERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAFLMEWY--HSQMENKMPVTEKWAPDNTYVNHWEVDTKMTT--------APMRIHRRLYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQENVDSEWGLYVRGHDGVAKELFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSP 691
            W   ++ER RV++N  QP  +  YT LG+ K++        L  ++  +SQ  +++P  E W   NTY NHWE  TKM              I   ++     V+E+W+G++L  ++ YGVR Y  G++LA HVDR +  VISAI+NV Q+ VD EW L V GHDG A  + +EPG+II YES S++HGRP   +G  +AN+F+HF P
Sbjct:  126 WLCTDTERDRVEMNLRQPSGMYNYTTLGFHKQRAPAKVIKLLTTFWEQNSQSISEIP-DEVWPKGNTYTNHWESPTKMLNIGDASLVGGGGSIRTEVWDATKEVLEQWTGVELSPSSLYGVRVYQEGAVLAPHVDR-NPLVISAIVNVAQD-VDEEWPLEVYGHDGNAYNITMEPGDIILYESHSILHGRPFPLKGRHYANVFIHFEP 330          
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Match: A0A7S4E9F8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E9F8_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.810e-39
Identity = 83/211 (39.34%), Postives = 127/211 (60.19%), Query Frame = 2
Query:  110 NSERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAFLMEWYHSQMENKMPVTEKWAPDNTYVNHWEVDTKMTT------APMRIHRR--LYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQENVDSEWGLYVRGHDGVAKELFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVTAN 718
            ++E SR+ ++  Q      +TELG+ K +     Y    E++    E +   +E W P NTYVNHW  D+ M +       P+    +  ++    P++E W+G KLK T+ YG+R Y+RG+ILA HVDR+   V SAIINV+Q+ V+ +W + V GHDGVA  + ++PG++  YES +V+HGRP   +G+ +AN+FVHF P +  D + N
Sbjct:   81 SNEESRMAMDRDQIPRQRNFTELGFAKLRAPKAVYEAAREFWDLHRETQ--TSESWPPGNTYVNHWVADSTMCSFEDRRLQPLGFKTKDIIWDQARPILEAWTGQKLKPTSLYGIRSYFRGAILATHVDRLPL-VTSAIINVDQD-VEEDWPIEVVGHDGVAYNVTLKPGDMALYESHTVLHGRPFPLKGNFYANLFVHFIPVDPDDPSKN 287          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDK4_9PHAE2.060e-17890.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHL7_ECTSI1.010e-15986.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4KHC4_9EUKA1.910e-4942.01Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A835YWU1_9STRA3.480e-4541.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UT49_9STRA5.270e-4340.20Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2THP0_9EUKA5.520e-4234.87Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S2MSB8_9STRA8.280e-4142.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1YWR3_TRICV9.360e-4138.50Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
B8CBJ8_THAPS1.200e-3941.35Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S4E9F8_9STRA1.810e-3939.34Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6569contigEcto-sp13_S_contig6569:3196..7999 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score158.3
Seed ortholog evalue4.5e-36
Seed eggNOG ortholog159749.K0RWS5
Model size1091
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.Ankyrin repeats (3 copies)
EggNOG OGs2DE90@1,2S5PQ@2759,2XEV1@2836
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-24_004100.1
Cds size729
COG Functional cat.S
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6569.17399.1prot_Ecto-sp13_S_contig6569.17399.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6569 3266..7707 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463905.3671653-UTR-Ecto-sp13_S_contig6569:3195..32651681463905.3671653-UTR-Ecto-sp13_S_contig6569:3195..3265Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6569 3196..3265 +
1681463905.4555268-UTR-Ecto-sp13_S_contig6569:7707..79991681463905.4555268-UTR-Ecto-sp13_S_contig6569:7707..7999Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6569 7708..7999 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463905.382765-CDS-Ecto-sp13_S_contig6569:3265..33701681463905.382765-CDS-Ecto-sp13_S_contig6569:3265..3370Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6569 3266..3370 +
1681463905.397424-CDS-Ecto-sp13_S_contig6569:5418..55951681463905.397424-CDS-Ecto-sp13_S_contig6569:5418..5595Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6569 5419..5595 +
1681463905.4111354-CDS-Ecto-sp13_S_contig6569:6016..61811681463905.4111354-CDS-Ecto-sp13_S_contig6569:6016..6181Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6569 6017..6181 +
1681463905.4303153-CDS-Ecto-sp13_S_contig6569:6868..69401681463905.4303153-CDS-Ecto-sp13_S_contig6569:6868..6940Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6569 6869..6940 +
1681463905.4453583-CDS-Ecto-sp13_S_contig6569:7497..77071681463905.4453583-CDS-Ecto-sp13_S_contig6569:7497..7707Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6569 7498..7707 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6569.17399.1

>prot_Ecto-sp13_S_contig6569.17399.1 ID=prot_Ecto-sp13_S_contig6569.17399.1|Name=mRNA_Ecto-sp13_S_contig6569.17399.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=243bp
MWQEETGIAWKRINSERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAF
LMEWYHSQMENKMPVTEKWAPDNTYVNHWEVDTKMTTAPMRIHRRLYQDL
LPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQE
NVDSEWGLYVRGHDGVAKELFIEPGEIIFYESASVIHGRPQAFQGSRFAN
IFVHFSPAEGWDVTANDVERAAKLGKTQKRQQESATDEKAKA*
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mRNA from alignment at Ecto-sp13_S_contig6569:3196..7999+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6569.17399.1 ID=mRNA_Ecto-sp13_S_contig6569.17399.1|Name=mRNA_Ecto-sp13_S_contig6569.17399.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4804bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6569:3196..7999+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTTCGCCGTTTGCAACGTGGGGTCGTCCTGTCGAGGCGAGTACAACCGCG CCAACGGTACCCTCAACAAGATGTGGCAGGAGGAAACCGGCATCGCGTGG AAGCGCATCAACAGCGAGCGGAGCCGGGTCAAGCTCAACGAGTACCAACC AGTCACGGTGCCAAAGTATACCGAGGTATGCTAATTAGTAATTTGTTATC TTCTTCACCCACTACATATGACGACTTCTGGGCACCCCTTTCGACTGTTG TGGTTATGTCTCGAACGAGCAGTCTTCCTGTTTGTGATTTTTATGTATGT TTTCTATAATAGCAATGTTGGTTGGGTAACCGCCCTCAGCGCGTGGTGTT GAGTATGGGTACTATGATTTACTTTCCCAGGATTGCGCGTAGCCATCTCA TGTCAAATTCACACAACAATGTCGCTCGCCCCACAGGCAAGAATCTCTCC AGTAGCCTTCCAGGGGTTTTTCGATTTAGTATGCATGTTGGATGGGGCAT GCAATCGGGGAAGATGGGTTAAGGTTAGGGATAGAGTGTGTACAAGGGGC CCTCCATGTGGACACCGTGGAACACCCCCCCCCCTCCGGGCCAAGATTGA CACGCAGCTATAAGGGGGTTTAGGCGGCACGCTTGCAGCACTCCATTGTA TAGGATCTAGTGTGTCTATGGTAAAACCGATATACTCTTCATTGAATAAA CTTTCGTGCCGCATTCTAAAACCCATAAAATTCTATTAATGTGTAGGCTT CTTGTCTTCACACTATTTCCTACACCACACACTAGACCTCGCGACCAAGA TTGACGCGTATTCTTGGGGTGTTTCCATAATTTCGACTCGCTCTGTGTAA GATCCCGCGCGCGCGCGCTGAAAAAGGCGCCTGAAAATGTCGAAACCCCG GGATTTTTTCAAAATGTCCCCGCCCGGGGACATACAAGGCCCATTCCCCC CCTCCCGGGACCAAGATTGCCACGTAGCCCAGGGGTGTTCCGACGTTTCC AGATGGAGAGCCCCTTGCTGCGTACCTCCTCCCTGTTCTACTTAATCATT AACTTGTTGATCTCGCGAAGGCGGTTCGATTCTCTCACGGGGGGGGGGCA GCACTTGGACACCAAAACGCATGCATACCCAGATCGGGTATCGTTCCGAA GTACGACAAACATACAACATTCCCTTTTCACGTTTTGGTGGTTTTGGTGA TGGTTGTGCTTGATTTTATAATTTACGAAATACATGTATCCGTACGATGG CAGAAAAGACAAGTCACTCGAGAGAATGCCCCGATTGAAGGGATGTGTTG ATAGCGTCTTTGCAGTTGTGACTGTTTCAAAGAGATGTCTTGGTAAGTCT TTACAGTGACTATTTCAACGGGATGTGTTGGTGAGTCAAATGACAGTGAC CGTTTTCAACGGCATGTGTTGATGAGTCTTTGCAGTGACTGTTTCAACGC TGCGTTTTACTTTTTGAGGGCGACGGTTAGGTTGCACGCCGGAATCGCTT GAGGGAGCAAGCAAAACCTCCCAGGTCGGACTGAAACACGCGAAAAACGC ATTTTCCCCTTTAGCCGTCTAACAACAGGCAGCTGCACTTATGCTGCACA ATAAGGGTTGTCGTGAATCGGTTTCTTTCCGAGAGATTTTCGCCACGGGT CGATGGGAAATGAAGGCGGCGTAGACAGGCACGTCTCCATCGGCACCTTA GCTGAGCATGACGTGCCACATTTTCATGCCCGCATGCAGCCGTGACGTGG CATGGTGTTGCCAAGATTTTCTCGAGCAGCACAACAGCCCGTTCCTCTGG GTTTCCCCACCACATCAACAACGGGCAACACAGAACAGTGGCCTTCGAGA GGGGGTCCTGAATGGAGTTGGGGATTAGGGATAGGGATACGAAACCCCCT CTCTATTTCCTACGTAGATTAATAATAAAATCCTCGCGAAGGCGGTCAGA ACATAACTCCACGTTGACATAAACTATGACACCCAGCGAAGCTTGACGTT AACAACACCGACGACATGATGACTCGCCCTCGTCAACGGGCACACCATAC GTGTTGCAAAGATTTTCTCGAGTAACATTGTAGTACGTCTGACCCGTTAC TCTTGGCAACAGCGAACAGAAACGAACTCCCCGTTGACACCGACGCGCTG ACACGGAAAGCTTCACGTTAACAAACGTCGACGACATGATAACACGCCCA CGGTCTTGGCACCCTCACGGCAGCTTGGGTACAAGAAGGAGAAGCTGAAC CCGGACACTTATGCATTCCTCATGGAGTGGTACCACAGCCAGATGGAAAA CAAGATGCCCGTGACCGAAAAGTGGGCCCCGGACAACACCTACGTCAATC ATTGGGAAGTCGATACCAAGATGACCACCGCGCCGATGAGGATCCACAGG GTGAGTTGAGGAGGAGCGCGATTTGGATCGGAGCCTTGACTTGCAAAGGA CACGCATGTTTTGGGGTATTGACTCTCGAAGACTTGGCTTGCGAAGGACT CGTCCAGAGGTGCTTTTTGTTTTGTACCGTGTAGATGGGTGGAGCGAAGA TTAGGCGCAACGCGGACAGAGACGTTACGAGGCGGAATGACAGGAACGAA CGCACGAAATCCCGAGGTGGAGTCTTGGAGTGACTTATTCGCCGGCTTGC TCATGGCGCTCTTGTATGTGATATGAATATGCCGTCCCCGACGAAGAAGA ATTGAAAAGCATAAAAGAAAACTCCCACTCTTAAAACCCAAGGTTTTACT TTTTTTCATTTCGCCGCTTTTTTTTCTTCTTCCTTGTTCGTCTTCACGCC TACGCGTGTCCGCGATGACAGCGCTTGTATCAGGATCTGCTCCCTGTGAT GGAGGAGTGGTCCGGCATCAAGCTCAAGTCTACGGCATGCTACGGGGTGC GACACTACTACAGGGGCAGCATCCTCGCGAACCACGTTGATCGAGTCGAC ACGCACGTCATCTCCGCAATCATCAACGTGGAGCAGGCGCGTGCCTCTTT ATCCCCCGTTTTTTTGCGTCACGATGACTTTCTTGAACGTGACTCTGCTT CGAAACAGTGGTGCAGGCCAGCACTCCCCATCAGCAAAGTTGTATGCTTG TACAAGAGTCCAAGCGAGACATACAACGTGCAACTGTGATGTATTTCCGA TTGGCTATAAATATATGGTTTCCCGCGTTCCATACCGTATTACCCGCCGT TCTGTGGGGCACATCAAGAGTATAGGCTCGACGGAGGAAGAAGCCGTACG TCACGTCTGCCATTTCATTGGTCAACCTCGAGTACCCCTAAGCTATACAT TTGATTTTATAGATTGTGCTGTGTCGTGTGCTCTTTTTTGTTGCGCTCCG TGCAAGCGCCGGATACTGTGTGTGGGACAGATTTCCGCGAGACTCCTTTG GCAGGCACCTGGCCCATATGTATGTTTTCTTGCTCAGCATCGACCGCGGT ATGCTAGCCGGGTGACTATTAATAATGATAAAATGCTTCAGGCTTGTCGC GGGATAACAAACACCAACACTCTCTAATCACGGGGTAAGTCATTAGTTTG TGTTTTGTGGCGACCAAACCCTTTTCATGACGACAGCAGTACCTCATGCG TGTGTGTGACAACTTTTTCGTTCCGTGCTCTCGTTCTTGTTCTTGGTCGC CCCCCCCCCCCTCCCTTCCCCAGGAGAATGTGGACTCGGAGTGGGGTTTG TATGTCCGCGGCCACGATGGTGTTGCCAAAGAGCTCTTCATTGAGGTGAG AGTTTTTTTTTTTGTCTTTATAGGACGAAAATGCAAACACACACATCTAA TAATGAGAAAATTGAGGTCGACCACGACATGCACGTTTCATTGTTCTTTT TCTGTCTCATACGTACTGTATTTTGAAGGTGTGTTTCTGCCTGCGACACC CGCGCGTCCGAAGCAGTTTTTTTTGTAGTTTCTCGTTGGGATCTCGCGTT CTTCAGAGGTGAACAACCTCTCGATGCGGCGCGCCATTTTCAACATTGAT GTCATTTTTCGCTGTACCTATTCCGGACACTGACATGCCCTCCCGGCAGC ACTTTTTCCGGACACTGAAGTGCCCTCACGGCAAAACACTCAAGAATAAT ATGGGCCCGAAGTTAAGAAATATGTCATCCAAAAACAGAGGCTTGAATTT CACGGCAAGTAAGAGAATAGGTCTAAGAAACAAAGCTCAGCGGCGGATCC TGCACTCTCTACCAACCTGTGCCCAACAATACTAGTGGCGATGAAATAAG AGCTGACCCGATTTTGACTTTTTCGTTTTGTCTTGTACCGTAACTTGTTC AGCCTGGAGAGATAATCTTCTACGAGAGCGCGAGCGTCATCCACGGCAGA CCGCAGGCATTCCAGGGGAGCAGATTCGCCAACATTTTCGTCCACTTCTC GCCGGCGGAAGGCTGGGACGTGACGGCCAATGACGTGGAGAGGGCCGCGA AACTCGGGAAAACGCAAAAGAGGCAGCAGGAAAGCGCCACCGATGAAAAG GCAAAGGCCTAGTGAGATGCCTCGCTTGCGGTATCTTTCCACGGTGCCGG TATCTTTGCGGGATGGTGTGTATTTTTTTGTGTTGTTGTTTTCGGCGTGA AGGTGTTGATCGACGGCGTCGCCGCGTTGGCTGGGTGGGGTTATAGAGAG CTGGGTGGGCCTTTGTTTGCTGTCATGAAAGATGCTGATAACCGGGATCG AGGACGTGACTGTAGAATTGTCCGGCGAAATTCAGAGATGGGCGCCGTCC TCTGTCAGACCTTCGGTGAGTGTATGTATGCATTCCTTTGTACTGCTGCT GTAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6569:3196..7999+

>mRNA_Ecto-sp13_S_contig6569.17399.1 ID=mRNA_Ecto-sp13_S_contig6569.17399.1|Name=mRNA_Ecto-sp13_S_contig6569.17399.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=729bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6569:3196..7999+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGGCAGGAGGAAACCGGCATCGCGTGGAAGCGCATCAACAGCGAGCG
GAGCCGGGTCAAGCTCAACGAGTACCAACCAGTCACGGTGCCAAAGTATA
CCGAGCTTGGGTACAAGAAGGAGAAGCTGAACCCGGACACTTATGCATTC
CTCATGGAGTGGTACCACAGCCAGATGGAAAACAAGATGCCCGTGACCGA
AAAGTGGGCCCCGGACAACACCTACGTCAATCATTGGGAAGTCGATACCA
AGATGACCACCGCGCCGATGAGGATCCACAGGCGCTTGTATCAGGATCTG
CTCCCTGTGATGGAGGAGTGGTCCGGCATCAAGCTCAAGTCTACGGCATG
CTACGGGGTGCGACACTACTACAGGGGCAGCATCCTCGCGAACCACGTTG
ATCGAGTCGACACGCACGTCATCTCCGCAATCATCAACGTGGAGCAGGAG
AATGTGGACTCGGAGTGGGGTTTGTATGTCCGCGGCCACGATGGTGTTGC
CAAAGAGCTCTTCATTGAGCCTGGAGAGATAATCTTCTACGAGAGCGCGA
GCGTCATCCACGGCAGACCGCAGGCATTCCAGGGGAGCAGATTCGCCAAC
ATTTTCGTCCACTTCTCGCCGGCGGAAGGCTGGGACGTGACGGCCAATGA
CGTGGAGAGGGCCGCGAAACTCGGGAAAACGCAAAAGAGGCAGCAGGAAA
GCGCCACCGATGAAAAGGCAAAGGCCTAG
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