mRNA_Ecto-sp13_S_contig6569.17399.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Match: A0A6H5JDK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDK4_9PHAE) HSP 1 Score: 506 bits (1302), Expect = 2.060e-178 Identity = 241/265 (90.94%), Postives = 251/265 (94.72%), Query Frame = 2
Query: 2 FAVCNVGSSCRGEYNRANGTLNKMWQEETGIAWKRINSERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAFLMEWYHSQMENKMPVTEKWAPDNTYVNHWEVDTKMTTAPMRIHRRLYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQENVDSEWGLYVRGHDGVAKELFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVTANDVERAAKLGKTQKRQQESATDEKAKA 796
FAVCNVGSSCRGEYNRANGTLNKMWQEE GI WKRINSERSRV LNEYQPVTVPK+TELGYKKEKLNPDTYA+LMEWYHSQMENK PVTEKWAPDNTYVNHWEVDTKMT AP RIHRRLYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIIN ENVD++WGLYVRGHDGVA++LFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVT DV+RAA LGKTQK +ESATD+KA+A
Sbjct: 41 FAVCNVGSSCRGEYNRANGTLNKMWQEEIGIVWKRINSERSRVMLNEYQPVTVPKFTELGYKKEKLNPDTYAYLMEWYHSQMENKAPVTEKWAPDNTYVNHWEVDTKMTAAPTRIHRRLYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIIN---ENVDTDWGLYVRGHDGVARDLFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVTTKDVQRAANLGKTQKGHEESATDKKARA 302
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Match: D7FHL7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL7_ECTSI) HSP 1 Score: 457 bits (1177), Expect = 1.010e-159 Identity = 228/265 (86.04%), Postives = 231/265 (87.17%), Query Frame = 2
Query: 2 FAVCNVGSSCRGEYNRANGTLNKMWQEETGIAWKRINSERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAFLMEWYHSQMENKMPVTEKWAPDNTYVNHWEVDTKMTTAPMRIHRRLYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQENVDSEWGLYVRGHDGVAKELFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVTANDVERAAKLGKTQKRQQESATDEKAKA 796
FAVCNVGSSCR EYNRANGTLNKMW EETGIA KRIN ER+RVKLNEYQPVTVPK+TELGYKKEKLNPDTYA+LMEWYH QMENKMPVTEKWA DNTYVNHWEV TKMTTAPMRIHRRLYQDLLPVMEEWSG KLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQ PGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVTAN VERAAK GKTQKRQQESATDEKAKA
Sbjct: 41 FAVCNVGSSCRDEYNRANGTLNKMWPEETGIAPKRINGERNRVKLNEYQPVTVPKFTELGYKKEKLNPDTYAYLMEWYHGQMENKMPVTEKWALDNTYVNHWEVGTKMTTAPMRIHRRLYQDLLPVMEEWSGTKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQ------------------------PGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVTANTVERAAKFGKTQKRQQESATDEKAKA 281
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Match: A0A7S4KHC4_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KHC4_9EUKA) HSP 1 Score: 179 bits (453), Expect = 1.910e-49 Identity = 92/219 (42.01%), Postives = 129/219 (58.90%), Query Frame = 2
Query: 62 LNKMWQEETGIAWKRINSERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAFLMEWYHSQMENKMPVT-EKWAPDNTYVNHWEVDTKMTTAPMRIHRRLYQDLLPVMEEWSG--IKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQENVDSEWGLYVRGHDGVAKELFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDV 709
L + E + +R +E+ R+ LN QP+ PK+TE+GY KL+ + L +YH +NK T E W P + +VNHWE T M + +R+ +P++E W G L+ TA YG+R Y S L NHVDR TH +S II V+Q+ D +W L V GHDG +EL + PG+++ YESASVIHGRP+ G +AN+FVHF P GW++
Sbjct: 139 LQNLTPGEKAVLLQRKENEKRRIWLNRNQPLKTPKFTEVGYAYSKLSDSLFDDLFNYYH---DNKHRQTFENWRPADHHVNHWESPTYMLPLTQSLRQRVIDYCVPILETWIGGETPLEFTALYGIRTYSNESYLLNHVDRSATHAVSVIIQVDQKVTD-DWLLEVHGHDGKVEELPMAPGQMVLYESASVIHGRPKPLNGEYYANVFVHFRPKNGWNL 353
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Match: A0A835YWU1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWU1_9STRA) HSP 1 Score: 170 bits (431), Expect = 3.480e-45 Identity = 82/200 (41.00%), Postives = 125/200 (62.50%), Query Frame = 2
Query: 104 RINSERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAFLMEWYHSQMENKMPVTEKWAPDNTYVNHWEVDTKMTTAPMR--IHRRLYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQENVDSEWGLYVRGHDGVAKELFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAE 697
R +E+ RV+ N QPV +P++T++G+KK ++ D + L+ +Y +N P E+W N Y N+ E + M P + ++ L P++EEWSG++L ST+CYG+R Y RGS LANHVD TH ISAIINV+QE V+ +W L + H G + + P +++ YESA+ +HGRP F G +AN+F+H+ P +
Sbjct: 260 REQNEKFRVRNNVQQPVGLPRFTDVGFKKIRVPDDVWDMLVTYYRQNKQN--PKIERWGKGNVYTNNLEAPSYMVNLPETGPLKPAIFNGLRPILEEWSGVELVSTSCYGIRAYTRGSWLANHVDTRATHTISAIINVDQE-VNKDWPLNIFDHAGNDHNITMAPRDMVLYESATCVHGRPSTFDGQFYANMFIHYKPTD 456
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Match: A0A7S2UT49_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT49_9STRA) HSP 1 Score: 165 bits (417), Expect = 5.270e-43 Identity = 82/204 (40.20%), Postives = 126/204 (61.76%), Query Frame = 2
Query: 98 WKRINS-ERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAFLMEWYHSQMENKMPVTEKWAPDNTYVNHWEVDTKMTTAPM--RIHRRLYQDLLPVMEEWSGI-KLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQENVDSEWGLYVRGHDGVAKELFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAE 697
++R N+ +R R++ N+ P VP +TE+G++K + PD + + +YH+ E+ E W NTY NH+E T M P R+ +++ L P +EEWSG+ +L+ TACYG+R Y G+ L HVDR+ TH IS IINV+Q+ V+ W L++ H G A + + PG+++ YESAS HGRP +G+ + N FVH+ P +
Sbjct: 271 YRRQNATDRERIRHNKEHPSIVPHFTEVGFEKVRTPPDVWEMIQTYYHANKEHT--ALEVWDDSNTYTNHFESPTYMIHLPENGRMKPEIFRRLQPYLEEWSGVDELEGTACYGIRVYQEGAELRGHVDRISTHAISVIINVDQD-VEEPWYLHIYDHSGSAHNVTMAPGDMVLYESASCQHGRPFPLKGNYYTNTFVHYRPKD 471
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Match: A0A7S2THP0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2THP0_9EUKA) HSP 1 Score: 159 bits (403), Expect = 5.520e-42 Identity = 91/261 (34.87%), Postives = 134/261 (51.34%), Query Frame = 2
Query: 2 FAVCNVGSSCRGEYN------RANGTLNKMWQEETGIAWKRINSERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAFLMEWYHSQMENKMPVTEKWAPDNTYVNHWEVDTKMTTAPMRIH------RRLYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQENVDSEWGLYVRGHDGVAKELFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVTANDVERAAKLGK 748
F+V G C Y R +G + + + W N +R + N QP + +TELG++K K+ D + L +Y + ++ V EKW N Y+NHWE M P +H R++++ L P +EEWSG +L+ T YG+R Y + L NHVDRV THV+SAI+++ + D W L + H G + I PGE++ YESA+ +HGRP FQG + N F HF P + W + + KL K
Sbjct: 95 FSVAQCGHPCHEHYGEEPCLERLDGRIRRAQLQPV---WDSQNEDRRQT--NRIQPQNLKNFTELGFEKRKIPDDVWELLRSYYENNKDSI--VLEKWPSTNPYINHWESVPFMIWLP-ELHTGDETKRKIFEGLRPHLEEWSGTELEHTDLYGMRVYKNNTFLENHVDRVATHVVSAIMHIADKQ-DIPWPLNIYDHYGNEHNITISPGEMVLYESATCVHGRPSLFQGEYYVNAFAHFRP-KNWISHLRGLRKKGKLTK 345
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Match: A0A7S2MSB8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MSB8_9STRA) HSP 1 Score: 159 bits (402), Expect = 8.280e-41 Identity = 84/200 (42.00%), Postives = 121/200 (60.50%), Query Frame = 2
Query: 113 SERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAFLMEWYHSQMENKMPVTEKWAPDNTYVNHWEVDTKMTTAPMRIHRRLYQDLLPVMEEWSG-IKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQENVDSEWGLYVRGHDGVAKELFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDV 709
S +R+ L++ Q VP TE G+ K++L P T+A + ++Y M E++ Y N + T T P R+ ++ +L +ME W+G +KLK T+CYGVR Y GS L HVD THVIS I+NV QE V W L + H+G E+ ++PG+++FYESA ++HGRPQ +G +ANIFVH+ P +GWDV
Sbjct: 292 SLETRMALSDVQSHFVPSLTEEGFYKDRLPPTTFARVTKFYEENYNTSM-TNEEYDGGPLY-NQRTIPTYHTPLPHRLQNDIFMELKDLMEVWAGGMKLKGTSCYGVRTYSPGSYLHLHVDTAQTHVISGIVNVAQE-VSKPWPLEILDHEGKLHEVNMDPGDLLFYESAKLLHGRPQPLEGQFYANIFVHYVPEKGWDV 488
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Match: A0A7S1YWR3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YWR3_TRICV) HSP 1 Score: 152 bits (384), Expect = 9.360e-41 Identity = 77/200 (38.50%), Postives = 121/200 (60.50%), Query Frame = 2
Query: 116 ERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAFLMEWYHSQMENKMPVTEKWAPDNTYVNHWEVDTKMTTAP--------MRIHRRLYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQENVDSEWGLYVRGHDGVAKELFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSP 691
E R+ +N +QP + YT LG++K + Y L ++ + +++ TE W+ +TY+NHW++ T+M + +++ ++EW G L +++ YG+R Y RG++LA HVDR+ V SAIINV+Q+ V++ W L V HDGVA + +EPG+++ YES SV+HGRP QGS +AN+FVHF P
Sbjct: 17 ESDRISMNLWQPRLMQNYTTLGFRKVRAPEKVYRLLRAFWRANRNSRL--TEAWSEGDTYLNHWDMPTQMVNVDNPRLSGGGKELEWKIWDATREAIQEWIGKPLSTSSVYGIRIYRRGAVLAPHVDRLPL-VSSAIINVDQD-VNAPWPLEVIAHDGVAYNVTMEPGDMVLYESHSVVHGRPYPLQGSFYANVFVHFEP 212
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Match: B8CBJ8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBJ8_THAPS) HSP 1 Score: 156 bits (395), Expect = 1.200e-39 Identity = 86/208 (41.35%), Postives = 123/208 (59.13%), Query Frame = 2
Query: 98 WKRINSERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAFLMEWY--HSQMENKMPVTEKWAPDNTYVNHWEVDTKMTT--------APMRIHRRLYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQENVDSEWGLYVRGHDGVAKELFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSP 691
W ++ER RV++N QP + YT LG+ K++ L ++ +SQ +++P E W NTY NHWE TKM I ++ V+E+W+G++L ++ YGVR Y G++LA HVDR + VISAI+NV Q+ VD EW L V GHDG A + +EPG+II YES S++HGRP +G +AN+F+HF P
Sbjct: 126 WLCTDTERDRVEMNLRQPSGMYNYTTLGFHKQRAPAKVIKLLTTFWEQNSQSISEIP-DEVWPKGNTYTNHWESPTKMLNIGDASLVGGGGSIRTEVWDATKEVLEQWTGVELSPSSLYGVRVYQEGAVLAPHVDR-NPLVISAIVNVAQD-VDEEWPLEVYGHDGNAYNITMEPGDIILYESHSILHGRPFPLKGRHYANVFIHFEP 330
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Match: A0A7S4E9F8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E9F8_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.810e-39 Identity = 83/211 (39.34%), Postives = 127/211 (60.19%), Query Frame = 2
Query: 110 NSERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAFLMEWYHSQMENKMPVTEKWAPDNTYVNHWEVDTKMTT------APMRIHRR--LYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQENVDSEWGLYVRGHDGVAKELFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVTAN 718
++E SR+ ++ Q +TELG+ K + Y E++ E + +E W P NTYVNHW D+ M + P+ + ++ P++E W+G KLK T+ YG+R Y+RG+ILA HVDR+ V SAIINV+Q+ V+ +W + V GHDGVA + ++PG++ YES +V+HGRP +G+ +AN+FVHF P + D + N
Sbjct: 81 SNEESRMAMDRDQIPRQRNFTELGFAKLRAPKAVYEAAREFWDLHRETQ--TSESWPPGNTYVNHWVADSTMCSFEDRRLQPLGFKTKDIIWDQARPILEAWTGQKLKPTSLYGIRSYFRGAILATHVDRLPL-VTSAIINVDQD-VEEDWPIEVVGHDGVAYNVTLKPGDMALYESHTVLHGRPFPLKGNFYANLFVHFIPVDPDDPSKN 287 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6569.17399.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6569.17399.1 >prot_Ecto-sp13_S_contig6569.17399.1 ID=prot_Ecto-sp13_S_contig6569.17399.1|Name=mRNA_Ecto-sp13_S_contig6569.17399.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=243bp MWQEETGIAWKRINSERSRVKLNEYQPVTVPKYTELGYKKEKLNPDTYAFback to top mRNA from alignment at Ecto-sp13_S_contig6569:3196..7999+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6569.17399.1 ID=mRNA_Ecto-sp13_S_contig6569.17399.1|Name=mRNA_Ecto-sp13_S_contig6569.17399.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4804bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6569:3196..7999+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6569:3196..7999+ >mRNA_Ecto-sp13_S_contig6569.17399.1 ID=mRNA_Ecto-sp13_S_contig6569.17399.1|Name=mRNA_Ecto-sp13_S_contig6569.17399.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=729bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6569:3196..7999+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |