prot_Ecto-sp13_S_contig6548.17366.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6548.17366.1
Unique Nameprot_Ecto-sp13_S_contig6548.17366.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length196
Homology
BLAST of mRNA_Ecto-sp13_S_contig6548.17366.1 vs. uniprot
Match: A0A6H5KVD5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVD5_9PHAE)

HSP 1 Score: 360 bits (925), Expect = 5.810e-121
Identity = 185/187 (98.93%), Postives = 186/187 (99.47%), Query Frame = 0
Query:    1 MRRAWAVITATTYALLPWCEEGPAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARDLPLKTALEGYFPKAGMVSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTLWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTG 187
            MR+AWAVITA TYALLPWCEEGPAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARDLPLKTALEGYFPKAGMVSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTLWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTG
Sbjct:  242 MRKAWAVITAATYALLPWCEEGPAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARDLPLKTALEGYFPKAGMVSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTLWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTG 428          
BLAST of mRNA_Ecto-sp13_S_contig6548.17366.1 vs. uniprot
Match: A0A835YPB8_9STRA (LrgB-like family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPB8_9STRA)

HSP 1 Score: 189 bits (481), Expect = 2.450e-54
Identity = 100/186 (53.76%), Postives = 126/186 (67.74%), Query Frame = 0
Query:    2 RRAWAVITATTYALLPWCEEGPAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARDLPLKTALEGYFPKAGMVSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTLWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTG 187
            R AW VITA ++ + P+    PA  STTV +LL  NALP   K ++HPLV CS++T   +  LG +  L    AL  YF K G+  GGAGD FFG+L+A CCALG RM+ +R  L  N  PLLAS+L ++  SLFGT AA GA  +TP+L+ TL QRSVMSSLGI A+ +LGGN  +AVASIL+TG
Sbjct:  254 REAWGVITAASFVIAPFYSSSPAMFSTTVAALLKGNALPARTKAVVHPLVTCSVVTAVVAAVLGRSEGLTTSGALAAYFTKRGIACGGAGDAFFGLLSACCCALGVRMYVSRRTLFDNAAPLLASSLLAASLSLFGTTAACGAARVTPKLTFTLAQRSVMSSLGISASQILGGNAGMAVASILLTG 439          
BLAST of mRNA_Ecto-sp13_S_contig6548.17366.1 vs. uniprot
Match: A0A7S2UXS0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXS0_9STRA)

HSP 1 Score: 181 bits (459), Expect = 1.120e-52
Identity = 95/187 (50.80%), Postives = 126/187 (67.38%), Query Frame = 0
Query:    1 MRRAWAVITATTYALLPWCEEGPAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARDLPLKTALEGYFPKAGMVSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTLWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTG 187
            +RRAW+V+TA +Y LLP     PA   +T+L+LL   ALPP + ++LHPL+    +T G +  LGA   +  K +L+ YF   G    G+GD FF +L+ SC ALG RMFY R+ L +NL  LL ST +SSM SLFGTAAAAGA+G+  +L++ LTQRSV + LG+  A  LG +PAL VASIL+TG
Sbjct:   87 LRRAWSVLTAISYVLLPVAGRQPATFCSTILTLLWGKALPPKISQVLHPLITAGALTSGVTTSLGALDAMSQKDSLQEYFRNTGFTGMGSGDAFFSLLSCSCTALGLRMFYARNTLQENLPTLLGSTAFSSMLSLFGTAAAAGALGMDDKLALMLTQRSVSTPLGLAGARDLGASPALTVASILITG 273          
BLAST of mRNA_Ecto-sp13_S_contig6548.17366.1 vs. uniprot
Match: A0A7S4D6V3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6V3_HETAK)

HSP 1 Score: 178 bits (451), Expect = 3.930e-52
Identity = 100/186 (53.76%), Postives = 124/186 (66.67%), Query Frame = 0
Query:    3 RAWAVITATTYALLPW-CEEGPAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARDLPLKTALEGYFPKAGMVSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTLWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTG 187
            RAW  +TA  + +LP    + PA  +TTVLSL+   +LP GV K+LHPLV C  IT  A+  LG    +  + AL+ YF   G+ + G GDLFFG+LNASCCALG RMF +R  L  NL  L+ +T +SSM SLFGT   AG  GL  ++S+ L+QRSVMSSLGI  A LLG +PAL VASILVTG
Sbjct:   30 RAWRAVTAFAFLVLPTRAGKNPALFATTVLSLVGGQSLPKGVTKVLHPLVTCGAITSIAAIALGRLEGMDREKALQDYFRNQGLGNLGPGDLFFGLLNASCCALGVRMFNSRRTLEANLPTLVGATAFSSMLSLFGTTWVAGRAGLPEKVSLMLSQRSVMSSLGIGGAQLLGASPALTVASILVTG 215          
BLAST of mRNA_Ecto-sp13_S_contig6548.17366.1 vs. uniprot
Match: A0A7S2RL00_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RL00_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.090e-32
Identity = 78/187 (41.71%), Postives = 109/187 (58.29%), Query Frame = 0
Query:    5 WAVITATTYALLPWCEEGPAAVSTTVLSLLHAN----ALPPGVKKILHPLVVCSLITGGASYGLGAARDLPLKTALEGYFPKAGMVSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTLWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTG 187
            W  I A  Y L       PA  +TT+ +++ A     +LP  V  + HPLVV +++TG + +    A  +P +   + Y    G + GGAGD    ++N +  ALG RMF  R IL +N +PL A     ++ SLFGTAAAAG   L P L + L+QRSVMS+LG+  A++LG +P LAVASIL+TG
Sbjct:  205 WVKIAAAAYMLQSTVGRKPAFAATTITAIIAAQKANPSLPKPVGSVAHPLVVAAIVTGVSLFLSAKAHGIPPEQLFDEYMNGKGPIGGGAGDAVAALMNGAVSALGIRMFQARAILEENWQPLAAGASAVALVSLFGTAAAAGYSELPPPLGLALSQRSVMSALGMAGANMLGASPNLAVASILLTG 391          
BLAST of mRNA_Ecto-sp13_S_contig6548.17366.1 vs. uniprot
Match: A0A7S3SVR1_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SVR1_EMIHU)

HSP 1 Score: 84.3 bits (207), Expect = 4.230e-16
Identity = 50/170 (29.41%), Postives = 81/170 (47.65%), Query Frame = 0
Query:   18 WCEEGPAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARDLPLKTALEGYFPKAGMVSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTLWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTG 187
            W  +     +T    +  +  +P   +K+LHPL+ C+L T  A   L  A   P    L  Y    G      G+L   +L  +  + GF M+  R +L+ +L  + A+T  ++   LFG+AAAA A+GL   L      R V + L I  + L+G +P +A   +++TG
Sbjct:   49 WLRDASLLTTTAGGFVAGSTLVPKRAQKLLHPLLTCTLCTHAAVAALALATAQPFSVLLRSYLLPGGAPLAAPGNLLLAMLGPATLSFGFSMYEKRRLLAASLPAVTAATAVAAAGGLFGSAAAARALGLDAALRAAAIPRQVTAPLAIAISGLVGADPGIACTIVVLTG 218          
BLAST of mRNA_Ecto-sp13_S_contig6548.17366.1 vs. uniprot
Match: M8AG30_TRIUA (Uncharacterized protein ywbG n=2 Tax=Triticum TaxID=4564 RepID=M8AG30_TRIUA)

HSP 1 Score: 84.0 bits (206), Expect = 1.790e-15
Identity = 49/166 (29.52%), Postives = 85/166 (51.20%), Query Frame = 0
Query:   23 PAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARDLPLKTALEGYFPKAGMVSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTLWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLL-GGNPALAVASILVTG 187
            P  +++TVL  +  + LPPG+KK+LHP++ C+L    ++   G      +  AL  Y  K    + GAGD+  G L +   +  F MF  R ++ ++   +  S   +S  SL+ TA     +GL P L++++  R +  +L +   S   G N +L  A +++TG
Sbjct:  225 PFMLASTVLGYMVGSGLPPGIKKLLHPIICCALSANLSAVAYGYLSGSGIDAALGDYLTKVPS-NPGAGDVLMGFLGSVILSFAFSMFKQRKLVKRHAAEIFTSIAIASTFSLYSTAILGRLIGLEPTLTISILPRCITVALALSIVSFFEGANTSLTAAVVVLTG 389          
BLAST of mRNA_Ecto-sp13_S_contig6548.17366.1 vs. uniprot
Match: D8LU31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU31_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 2.700e-15
Identity = 51/178 (28.65%), Postives = 95/178 (53.37%), Query Frame = 0
Query:   14 ALLPWCEEGPAAVSTTVLSLLHANA---LPPGVKKILHPLVVCSLITGGASYGLGAARDLPLKTALEGYFPKAGM-VSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTLWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTG 187
            ALL    +  A +S  + +L   +A   +P  V K +HP+V+CS +  G +  +G    L     L  Y  ++   V  GAGD+  G+L  S  +   +M+  R+++ ++ + + A +++ + + LFGTA  +  +GL   L +    R++ S L +   SL+G +P+LA+A +++TG
Sbjct:  267 ALLTKLSKPAAQLSLLLATLFGFSAGTRMPRRVSKAVHPVVMCSAVAMGTAAAIGKGVGLGFADMLRSYLTRSRCPVHLGAGDVLLGLLGPSVLSFAVQMYRRRNLIFEDAKQVAAGSVFCASSGLFGTALVSRLLGLPTTLRLAALSRNITSPLAMAICSLIGADPSLAIAIVVLTG 444          
BLAST of mRNA_Ecto-sp13_S_contig6548.17366.1 vs. uniprot
Match: A0A5M8PQJ8_9LECA (Uncharacterized protein n=1 Tax=Lasallia pustulata TaxID=136370 RepID=A0A5M8PQJ8_9LECA)

HSP 1 Score: 80.1 bits (196), Expect = 4.890e-14
Identity = 55/175 (31.43%), Postives = 89/175 (50.86%), Query Frame = 0
Query:   23 PAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARDLPLKTALEGYFPKA----------GMVSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTLWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTG 187
            PA ++  VL+   A ALP   K++LHP+++ S+IT    + L   R   L   L  Y  K           G+   GAGD+F  VL+ S  AL   MF  R+ L ++   ++   +  S+ SLFG  A   A+G++ + S++   RS+  +L  P+A+ LGG+  L     +++G
Sbjct:  290 PAQLALNVLAYFAALALPGNYKRVLHPVLLSSVITIMGIWMLALCRHDDLHHGLHAYSTKTRYLQIWNGDKGLQRPGAGDVFSSVLDVSIVALALPMFQYRNELRRHFLSIIIPNISVSIASLFGYPALCYAIGISSQRSLSFAARSLTLALATPSATNLGGDLNLVAVLCIMSG 464          
BLAST of mRNA_Ecto-sp13_S_contig6548.17366.1 vs. uniprot
Match: A0A165EG11_9BASI (Uncharacterized protein (Fragment) n=1 Tax=Calocera cornea HHB12733 TaxID=1353952 RepID=A0A165EG11_9BASI)

HSP 1 Score: 78.6 bits (192), Expect = 7.840e-14
Identity = 54/178 (30.34%), Postives = 94/178 (52.81%), Query Frame = 0
Query:   23 PAAVSTTVLSLLHANAL-PPGVKKILHPLVVCSLITGGASYGLGAARDLPLKTALEGYFP-----------KAGMVSG-GAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTLWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTG 187
            P  ++  VL+ L +  L PP V++ LHP++ CS++T  A +GLGA+R   ++ +L  Y             + G V+  GAGD+ + VL+AS  +L   M+  R  L ++   + ++T+  ++ S+F       A+ L+P   +    RSV + + IP  + L G+P L V   ++TG
Sbjct:   40 PLFLALNVLAFLFSVLLVPPKVRRFLHPIITCSVLTVLAIWGLGASRGWGIQQSLGKYSTGSRYLVLFDPSRTGHVAPPGAGDVLYSVLDASIVSLAVPMYRYRGELKRHAFEMFSTTIPLAVLSMFIYPLVGRAIQLSPSRGLAFAARSVTTPMAIPMEATLQGDPGLTVVLCILTG 217          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6548.17366.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVD5_9PHAE5.810e-12198.93Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YPB8_9STRA2.450e-5453.76LrgB-like family-domain-containing protein n=1 Tax... [more]
A0A7S2UXS0_9STRA1.120e-5250.80Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4D6V3_HETAK3.930e-5253.76Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2RL00_9STRA1.090e-3241.71Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3SVR1_EMIHU4.230e-1629.41Hypothetical protein n=2 Tax=Emiliania huxleyi Tax... [more]
M8AG30_TRIUA1.790e-1529.52Uncharacterized protein ywbG n=2 Tax=Triticum TaxI... [more]
D8LU31_ECTSI2.700e-1528.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5M8PQJ8_9LECA4.890e-1431.43Uncharacterized protein n=1 Tax=Lasallia pustulata... [more]
A0A165EG11_9BASI7.840e-1430.34Uncharacterized protein (Fragment) n=1 Tax=Calocer... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007300CidB/LrgB familyPFAMPF04172LrgBcoord: 34..187
e-value: 3.3E-18
score: 66.0
IPR007300CidB/LrgB familyPANTHERPTHR30249PUTATIVE SEROTONIN TRANSPORTERcoord: 22..187
NoneNo IPR availablePANTHERPTHR30249:SF0PLASTIDAL GLYCOLATE/GLYCERATE TRANSLOCATOR 1, CHLOROPLASTICcoord: 22..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..111
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 145..163
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 164..185
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..92
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..122
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 186..195
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableTMHMMTMhelixcoord: 165..187
NoneNo IPR availableTMHMMTMhelixcoord: 46..68
NoneNo IPR availableTMHMMTMhelixcoord: 123..145
NoneNo IPR availableTMHMMTMhelixcoord: 88..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6548contigEcto-sp13_S_contig6548:607..3672 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6548.17366.1mRNA_Ecto-sp13_S_contig6548.17366.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6548 586..7102 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6548.17366.1 ID=prot_Ecto-sp13_S_contig6548.17366.1|Name=mRNA_Ecto-sp13_S_contig6548.17366.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=196bp
MRRAWAVITATTYALLPWCEEGPAAVSTTVLSLLHANALPPGVKKILHPL
VVCSLITGGASYGLGAARDLPLKTALEGYFPKAGMVSGGAGDLFFGVLNA
SCCALGFRMFYNRDILSKNLRPLLASTLWSSMTSLFGTAAAAGAVGLTPR
LSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTGEDCSCQML*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007300CidB/LrgB