mRNA_Ecto-sp13_S_contig6540.17354.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig6540.17354.1
Unique Name	mRNA_Ecto-sp13_S_contig6540.17354.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig6540.17354.1 vs. uniprot
Match: A0A6H5LJL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJL3_9PHAE)

HSP 1 Score: 1053 bits (2722), Expect = 0.000e+0
Identity = 909/1082 (84.01%), Postives = 926/1082 (85.58%), Query Frame = 1

Query:  406 PVKNSKHSSKEERSAQPPPQEGRPHERNNSAGSGLLGDCPLPDGSSAKSESCLSNVSGGGGRSESWRSSLSINMSVGXXXXXX-KSELSVGKNSGHEVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGREEDE--TRSRDPQQGHGRAGSGHATPAEGLPPAAPEPRNRHVLAAIKEMRELRQLTTAAMDRASGVDRLKKPNVVEGXXXXXXXXXXXXXXXVXXXXXXXXXVERQGTGSTLAGTVSEWDASPDAQAGGVGAPKQXXXXXXXXXXXXXXXXXXXXXXXXXXPTTRSRVLSRFLSSVGRRKSSVTNTSSEDRFEDRSSDRGTPAPKTGSDLPPKQQQHQNGTGDTSGLSRAASTASGVSPSPSALSIASGEHRSARQQQVGPGDQYNVGGSPFEPGSRSGAGNDGIPSFVRTRRAHVSQARRGLVEQVATSTRQAPVEQQRRRGSSKGGMEDAAARAAAGLSNGSVSPARSARSTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIR---SGSGSSRRRVPHPEGILEEEQPDTRGRSPKTDNSGLYGTSRGRSGKSILAVAASPARAARSKXXXSVAAGDSSSSSRGRGPEGHGRRGSTSSSXXXXXGEQRDRHRSSSVGRHDPRHRRRSEDGAEESDSSXXXXXXXXXXXXXXXXXXXSEGGGXXXXXXXXXXXXXXAGDLSSDFSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAPRIPSRQRHQRHRSDGAVVSHEARRQAEAGSAGVGXXXXXXXXXXXXXXXXXXXXYPDGGGREARDRRAKAKGCAARGPQPSVAAFKSVNGGGGSGGQEIRDLIASTRAQSSAVFKNGVGGGGARRPAAEEPKLQQPRSRRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTPRSRAKLVGANGSSGXXXXXXXXXXXXXXXXXXASSRESSRERPRKSXXREPPRGSSRERXXXXXXXXXXXXXXXXXRVYRNDGGERGRSGXXXXXXXXGGXXXARSRSKEXXXXXXXRRADGDGAAPSN-PKVKISFDGGVPYGVGDYTGAVKDGVPDGQ 3630
            P+K SKHSSK+ER AQPPPQEGRPHERNNSAGSGLLGDCPLPDGSSAKSESCLSNVSGGGGRSESWRSSLSINMSVG       +SELSVGKNSGH+VVA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         TR RD QQGHGRAGSGH TPAEGLPPAAPEPRN+HVLAAIKEMRELRQLTTAAMDRASGVDRL KPNV+EG  XXXXXXXXXXXXX XXXXX    VERQGT STL GTVSEWDASPDA AGGVG PKQ         XX XXX           P+TRSRVLSRFLSSVGRR+SSVTNTSSEDRFEDRSSDRGTPAPKTGSDLPPKQQQHQNGTGDTSGLSRAAS ASGVSPSPSALSIASGEHRSARQQQVGPGDQYNVGGSPFE GSRSGAGN GIPSFVRTRRAHVSQARRGLVEQV TSTRQAPVEQQR RGSSKG MEDAAARAAA LSNGSVSPARS     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     SGSGSSRRRVPHPEGILEE QP+TRGRSPKTDNSGLYG+SRGRSGK +LAVAASPARAARSK   SVAAGDS SSSRGRGPEGHGRRGSTSSS     GE+RDRHRSSSVGRHDPRHRRRSEDGAE+SD  XXXXXXXXXXXXXXXXXX SE GGXXXXXXXX      AGDLSSDFSES   XXXXXXXXXXXXXXXXXXX         XXX  A  IPSRQRHQRHRSDGAVVSHEARR+AE       XXXXXXXXXXXXXXXXXXXXYPDGGGREARDRRAKAKGCAARGPQPSVAAFKSVNGGGGSGGQEIRDLIASTRAQSSAVFKNG GG GARRPAAEEPKLQQPRSRRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS+TPRSRAKLVGANGSSGXXXXXXXXXXXXXXXXXXASSRESSRERPR S  REP RGSSRERXXXXXXXXXXXX      VYRNDGGERGRSG     XXX  XXX       XXXXXXX             P+VK+SFDGG PYGVGDYTGAVKDGVPDGQ
Sbjct:  161 PIKKSKHSSKDERLAQPPPQEGRPHERNNSAGSGLLGDCPLPDGSSAKSESCLSNVSGGGGRSESWRSSLSINMSVGGVGGGGSRSELSVGKNSGHKVVAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRYRDSQQGHGRAGSGHTTPAEGLPPAAPEPRNKHVLAAIKEMRELRQLTTAAMDRASGVDRLTKPNVLEGGSXXXXXXXXXXXXXXXXXXX----VERQGTRSTLTGTVSEWDASPDAPAGGVGTPKQQQQQPLPQQXXPXXX-----------PSTRSRVLSRFLSSVGRRRSSVTNTSSEDRFEDRSSDRGTPAPKTGSDLPPKQQQHQNGTGDTSGLSRAASAASGVSPSPSALSIASGEHRSARQQQVGPGDQYNVGGSPFESGSRSGAGNGGIPSFVRTRRAHVSQARRGLVEQVTTSTRQAPVEQQRHRGSSKGRMEDAAARAAAELSNGSVSPARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGSSRRRVPHPEGILEE-QPETRGRSPKTDNSGLYGSSRGRSGKPVLAVAASPARAARSKSSRSVAAGDSGSSSRGRGPEGHGRRGSTSSSGRHGSGERRDRHRSSSVGRHDPRHRRRSEDGAEDSDXXXXXXXXXXXXXXXXXXXXPSESGGXXXXXXXXVE----AGDLSSDFSESGEEXXXXXXXXXXXXXXXXXXXPKGRSKGDAXXXXXATCIPSRQRHQRHRSDGAVVSHEARRRAEXXXXXX-XXXXXXXXXXXXXXXXXXXXYPDGGGREARDRRAKAKGCAARGPQPSVAAFKSVNGGGGSGGQEIRDLIASTRAQSSAVFKNGGGGVGARRPAAEEPKLQQPRSRRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMTPRSRAKLVGANGSSGXXXXXXXXXXXXXXXXXXASSRESSRERPRMSSSREPRRGSSRERXXXXXXXXXXXX------VYRNDGGERGRSGGWSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQVKLSFDGGAPYGVGDYTGAVKDGVPDGQ 1215

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BLAST of mRNA_Ecto-sp13_S_contig6540.17354.1 vs. uniprot
Match: D7G303_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G303_ECTSI)

HSP 1 Score: 1001 bits (2588), Expect = 0.000e+0
Identity = 865/1091 (79.29%), Postives = 879/1091 (80.57%), Query Frame = 1

Query:  394 REGNPVKNSKHSSKEERSAQPPPQEGRPHERNNSAGSGLLGDCPLPDGSSAKSESCLSNVSGGGGRSESWRSSLSINMS-VGXXXXXXKSELSVGKNSGHEVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA------GREEDETRSRDPQQGHGRAGSGHATPAEGLPPAAPEPRNRHVLAAIKEMRELRQLTTAAMDRASGVDRLKKPNVVEGXXXXXXXXXXXXXXXVXXXXXXXXXVERQGTGSTLAGTVSEWDASPDAQAGGVGAPKQXXXXXXXXXXXXXXXXXXXXXXXXXXPTTRSRVLSRFLSSVGRRKSSVTNTSSEDRFEDRSSDRGTPAPKTGSDLPP-KQQQHQNGTGDTSGLSRAASTASGVSPSPSALSIASGEHRSARQQQVGPGDQYNVGGSPFEPGSRSGAGNDGIPSFVRTRRAHVSQARRGLVEQVATSTRQAPVEQQRRRGSSKGGMEDAAARAAAGLSNGSVSPARSARSTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSGSGSSRRRVPHPEGILEEEQPDTRGRSPKTDNSGLYGTSRGRSGKSILAVAASPARAARSKXXXSVAAGDSSSSSRGRGPEGHGRRGSTSSSXXXXXGEQRDRHRSSSVGRHDPRHRRRSEDGAEESDSSXXXXXXXXXXXXXXXXXXXSEGGGXXXXXXXXXXXXXXAGDLSSDFSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAPRIPSRQRHQRHRSDGAVVSHEARRQAEAGSAGVGXXXXXXXXXXXXXXXXXXXXYPDGGGR--EARDRRAKAKGCAARGPQPSVAAFKSVNGGGGSGGQEIRDLIASTRAQSSAVFKNGVGGGGARRPAAEEPKLQQPRSRRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTPRSRAKLVGANGSSGXXXXXXXXXXXXXXXXXX-ASSRESSRERPRKSXXREPPRGSSRERXXXXXXXXXXXXXXXXXRVYRNDGGERGRSGXXXXXXXXGGXXXARSRSKEXXXXXXXRRADGDGAAP-SNPKVKISFDGGVPYGVGDYTGAVKDGVPDGQ 3630
            R+GNPVKNSKHSSKEERSAQP   EGR HERNNSAGSGLLGDC LPDGSSAKSESCLSN+SGGG RSESWRSSLSINMS   XXXXXX SELSVGKNSGHEVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       G     TR  D QQGHGRAGSGH TPAEGLPPAAPEPRN+HVLAAIKEMRELRQLTTAAMDRASGVDRLKKPNV+EG XXXXXXX    XXX XXXXX    VERQGTGSTLAGTVSEWDASPDA AGGVGAPKQ                          P TRSRVLSRFLSSVGRR+SSVTNTSSEDRFEDRSSDRGTPAPKTGSDLPP +QQQHQNGTGDTSGLSRAAS ASGVSPSPSALSIASGEHRSARQQQVGPGDQYNVGGSPFE GSRSGAG DGIPSFVRTRRAHVSQARRGLVEQV  STRQ PVEQQRRRGSSKG MEDAAARAAAGLSNGSVSPARSARSTH  XXXXXXXXXXXXXXXXXXXXXX              SGSSRRRVPHPEGILEEEQP+TRGRSPKTDNSGLYG+SRGRSGKS+LAVAASPARAA SK   SVAAGDSSSSSRGRGPEGHGRR      XXXXX          SVGRHDPRHRRRSEDGAEESDSS XXXXXXXXXXXXXXXXXX   G   XXXXXXX     AGDLSSDFSES        XXXXXXXXXXXXXXX           SSAPRIPS+QRHQRHRSDGAVVSHEARR+AEAGSA   XXXXXXXXXXXXXXXXXXXX         EARDRRAKAKGCAARGPQPSVAAFKSVNGG    GQEIRDLIASTRAQSSAVFK          PAAEEPKLQQPRSRRSS  XXXXXXXXXXXXXX             S+TPRSRAKLVGANGSS XXXXXXXXXXXXXXXXXX ASSRESSRERPRKSXXREPPRGSSR RXXXXXXXXXXXX      VYRNDG ERGRSG      XX  XXX     KE    XX R ADGDG AP +NPKVK+SFDGG PYGVGDYTGAVKDGVPDGQ
Sbjct:  302 RDGNPVKNSKHSSKEERSAQPXXXEGRRHERNNSAGSGLLGDCSLPDGSSAKSESCLSNMSGGGSRSESWRSSLSINMSGXXXXXXXXXSELSVGKNSGHEVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXTRYSD-QQGHGRAGSGHTTPAEGLPPAAPEPRNKHVLAAIKEMRELRQLTTAAMDRASGVDRLKKPNVLEGGXXXXXXXSDVHXXXXXXXXX----VERQGTGSTLAGTVSEWDASPDAPAGGVGAPKQQQPLPQQQ------------------PPTRSRVLSRFLSSVGRRRSSVTNTSSEDRFEDRSSDRGTPAPKTGSDLPPPQQQQHQNGTGDTSGLSRAASAASGVSPSPSALSIASGEHRSARQQQVGPGDQYNVGGSPFESGSRSGAGIDGIPSFVRTRRAHVSQARRGLVEQVTMSTRQPPVEQQRRRGSSKGRMEDAAARAAAGLSNGSVSPARSARSTHSMXXXXXXXXXXXXXXXXXXXXXXSGSGR---------SGSSRRRVPHPEGILEEEQPETRGRSPKTDNSGLYGSSRGRSGKSVLAVAASPARAALSKSSRSVAAGDSSSSSRGRGPEGHGRRDXXXXXXXXXXXXXXXXXXXXSVGRHDPRHRRRSEDGAEESDSSRXXXXXXXXXXXXXXXXXXXXXG---XXXXXXXEEEVEAGDLSSDFSESGREEEGEGXXXXXXXXXXXXXXXKGHSKGDAAASSSAPRIPSQQRHQRHRSDGAVVSHEARRRAEAGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARDRRAKAKGCAARGPQPSVAAFKSVNGGXXXXGQEIRDLIASTRAQSSAVFKXXXXXXXXXXPAAEEPKLQQPRSRRSSREXXXXXXXXXXXXXXSRSGRGGSRSRSRSITPRSRAKLVGANGSSXXXXXXXXXXXXXXXXXXXXASSRESSRERPRKSXXREPPRGSSRGRXXXXXXXXXXXX------VYRNDG-ERGRSGGRSGGGXX--XXXXXXXXKEARGSXXTRGADGDGGAPPNNPKVKLSFDGGAPYGVGDYTGAVKDGVPDGQ 1348

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig6540.17354.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig6540.17354.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5LJL3_9PHAE	0.000e+0	84.01	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G303_ECTSI	0.000e+0	79.29	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig6540	contig	Ecto-sp13_S_contig6540:786..7855 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	0
Start	1
Seed ortholog score	1026.9
Seed ortholog evalue	7.4e-297
Seed eggNOG ortholog	2880.D7G303
Model size	3630
Hectar predicted targeting category	other localisation
Exons	7
EggNOG free text desc.	Translation initiation factor IF-2, N-terminal region
EggNOG OGs	COG5253@1,KOG0229@2759
Cds size	3621
COG Functional cat.	T
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig6540.17354.1	prot_Ecto-sp13_S_contig6540.17354.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig6540 795..7855 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681463901.9482253-UTR-Ecto-sp13_S_contig6540:785..794	1681463901.9482253-UTR-Ecto-sp13_S_contig6540:785..794	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig6540 786..794 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681463901.9608076-CDS-Ecto-sp13_S_contig6540:794..857	1681463901.9608076-CDS-Ecto-sp13_S_contig6540:794..857	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig6540 795..857 +
1681463901.9713597-CDS-Ecto-sp13_S_contig6540:1300..1369	1681463901.9713597-CDS-Ecto-sp13_S_contig6540:1300..1369	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig6540 1301..1369 +
1681463901.9815836-CDS-Ecto-sp13_S_contig6540:1790..1859	1681463901.9815836-CDS-Ecto-sp13_S_contig6540:1790..1859	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig6540 1791..1859 +
1681463901.9926207-CDS-Ecto-sp13_S_contig6540:2332..2470	1681463901.9926207-CDS-Ecto-sp13_S_contig6540:2332..2470	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig6540 2333..2470 +
1681463902.0026336-CDS-Ecto-sp13_S_contig6540:2952..3018	1681463902.0026336-CDS-Ecto-sp13_S_contig6540:2952..3018	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig6540 2953..3018 +
1681463902.0127683-CDS-Ecto-sp13_S_contig6540:3757..6889	1681463902.0127683-CDS-Ecto-sp13_S_contig6540:3757..6889	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig6540 3758..6889 +
1681463902.022715-CDS-Ecto-sp13_S_contig6540:7771..7855	1681463902.022715-CDS-Ecto-sp13_S_contig6540:7771..7855	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig6540 7772..7855 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig6540:786..7855+
coding sequence from alignment at Ecto-sp13_S_contig6540:786..7855+

protein sequence of mRNA_Ecto-sp13_S_contig6540.17354.1

>prot_Ecto-sp13_S_contig6540.17354.1 ID=prot_Ecto-sp13_S_contig6540.17354.1|Name=mRNA_Ecto-sp13_S_contig6540.17354.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1207bp
MVWHIGKKYRGEWKEGKRDGKGWQRWTDGRTFDGEWKDGKPHGKGYWTSP
RGEAYDGNLVRGKKSGEGTFTYPDGKSYTGTWLNGLRHGEGTRYYPDGSI
YRGSWAYDKRHGVGEYTWRDGRVWAGHWREGNPVKNSKHSSKEERSAQPP
PQEGRPHERNNSAGSGLLGDCPLPDGSSAKSESCLSNVSGGGGRSESWRS
SLSINMSVGGGGGGSKSELSVGKNSGHEVVAEEEEEEEEEEEEEQQEEEE
DEEEEEEEEEEEDAGREEDETRSRDPQQGHGRAGSGHATPAEGLPPAAPE
PRNRHVLAAIKEMRELRQLTTAAMDRASGVDRLKKPNVVEGGGGGGGGGG
CGGGSDVHGGDEGGGGVERQGTGSTLAGTVSEWDASPDAQAGGVGAPKQQ
QQQQQQQQPLPQQQPPPQPPPPQQQPTTRSRVLSRFLSSVGRRKSSVTNT
SSEDRFEDRSSDRGTPAPKTGSDLPPKQQQHQNGTGDTSGLSRAASTASG
VSPSPSALSIASGEHRSARQQQVGPGDQYNVGGSPFEPGSRSGAGNDGIP
SFVRTRRAHVSQARRGLVEQVATSTRQAPVEQQRRRGSSKGGMEDAAARA
AAGLSNGSVSPARSARSTHSTRSTHSSRSTQSFRSTHSTHSTHSFRSTQS
ARNIRSGSGSSRRRVPHPEGILEEEQPDTRGRSPKTDNSGLYGTSRGRSG
KSILAVAASPARAARSKSSRSVAAGDSSSSSRGRGPEGHGRRGSTSSSGR
HGSGEQRDRHRSSSVGRHDPRHRRRSEDGAEESDSSRRSERPSRGAASRS
RSFRPSEGGGGGDGGGDGEEEEVEAGDLSSDFSESGEEEECEGKRRRARK
SSSSSSYSKGRSKGDAAASSSAPRIPSRQRHQRHRSDGAVVSHEARRQAE
AGSAGVGDNDDDDAEQAAAAAAAAAGAYPDGGGREARDRRAKAKGCAARG
PQPSVAAFKSVNGGGGSGGQEIRDLIASTRAQSSAVFKNGVGGGGARRPA
AEEPKLQQPRSRRSSREPSRERPREQSRERASRSGRGGSRSGNRSVTPRS
RAKLVGANGSSGGFFATGGGGEEARRHQRRASSRESSRERPRKSSSREPP
RGSSRERGSSRERGSSRERGSSRERVYRNDGGERGRSGGRSGGRSGGGGG
GARSRSKEGRGSGRTRRADGDGAAPSNPKVKISFDGGVPYGVGDYTGAVK
DGVPDGQ

mRNA from alignment at Ecto-sp13_S_contig6540:786..7855+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig6540.17354.1 ID=mRNA_Ecto-sp13_S_contig6540.17354.1|Name=mRNA_Ecto-sp13_S_contig6540.17354.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7070bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6540:786..7855+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGGCGAGATGGTGTGGCACATCGGGAAGAAGTACCGGGGCGAGTGGAA
GGAGGGCAAGAGAGACGGCAAGGTTAGGCGGCACCGTAGAATAAGTTTTG
CAGAGGTCCATACCTGCCGGGTGTTGTTTGTTCACCACTTGCTTTTTTAT
CGGACGACGACGCGGTCTTCACTCTATTGTGTCGTTTTGGTCGTTGTCAG
AGATGCTGCATGGGTTCTCTCTCGTTGGTGCTAATGATGTGCTGTAGCGG
TCGGTTGGAGACCGGACGCCCTTCATCTTCTTCCTTCCCTGACGGGTGTC
GTTTTGATTACCCTACTTTGCTTCGGGTTGGTATGACTGCAGTGAGATAC
GGAGGAGTGTTTTTTTTGCGCTCTCTCACGTGATGGCACGTGTTGGTTGC
CTCTGTTTTTGTTGTTTTGCCTCGCGATATTTTGCACCTGTTTATCTGCT
GTTGTTGATCTTGTAGTTGTAGCTGCTGTACCAACTTTCTCACCGCCGAT
GGCATTATTTCACAGGGGTGGCAGCGTTGGACGGATGGAAGGACGTTCGA
CGGAGAGTGGAAAGACGGGAAGCCGCATGGGAAGGTGACGACACGGCGAG
GGGGCGACGCGGAATGCATCAGGCATCGCTTGAACCGTTTTCTCTCTTTT
CGTTTCTCAAGAACTGCCATCGGCCACTAGACTACTGAACGGCCAGTCCT
TGCCGTGTATTTGTATGTACTCACCTGTACATGTATGCCAGGTACTGTGG
TTGTATTCCTGCTGTGTGCGGAAGTCCGTGGACACCGTATTTTGTGGATG
TCGGTGTTGCGGGTGTAGGATTGTGGTTTATGCTCGTCCATAGCTGATTA
CGGATTTGGTTCCGTGGTTGGGCCGATTCGTTGATCACCCGCTCCATTTT
CCTGATTTTGTGGAAACTCGCATTGATTCGGCGTGTTTTTTATGTTGACC
TCTTGTTTTTATGTCTGAATTTTTTTCTATTATTTACTATCATTTTTTTT
TGCAGGGCTACTGGACATCGCCAAGGGGCGAGGCCTACGACGGAAATCTC
GTTCGAGGGAAGAAGAGCGGCGAGGTGAGGGAGAGAGAACCATTCGAATC
GACCAATAGAATCAACCAATGAAATCGACTGCTCATCTTGCGGCAAACCA
ATGACAATCAATTTTCTTGTCCGGGGCAAGAGAGGGCAGCGTGGTGAGCC
CCACCAGCGCAACAAAAGATCAGATGACCCTAAGAAGGCGGTAATACTGC
GGTTGTCCGAGTGTTCCACCAATGAGATGTTTCGTGGGCGCCTCTGCTCG
CGAGATGGGGACTTCCTCTGCCCGTCCGCTTGTCGCTGGTTCGTCAGGGT
TGTTTCTACCCGTAACGTTTTTTTCGGCTCGAAACAAATAAAAAGTCGCA
CGCGGGTATGAGTTAATATCACACGGCCGCCTTGCGACCTTTCCGGCTCC
GTTTGACGGTGGACTCCATTTTCTTGTTTATTGTGGTGCGCCGCGAACAC
CGTTTGTTTGTCTGGTCCGAATCCCACCCCCTGCCCCTCCTACCAAGGGT
ACATTCACATACCCCGACGGTAAATCTTACACGGGGACCTGGTTGAACGG
TCTACGTCACGGCGAGGGCACGAGGTATTACCCCGACGGCAGCATATACA
GGGGCTCCTGGGCTTACGACAAGCGGCACGGCGTGGTGAGGAAGAAACGC
GGCGGAATTATAGCAAACGCGGCGAAACTCTGGGAAACGCTGCGTGCATC
TTGTAGCTGGCTGGGCTTTTGCGCATCCCGTGTATCTCGTATAGTGGGTA
TCTGGCGATACGTTACCCTGGCGGAATGTCGAAGAGGCGGGGGGCTGCTG
ACGCAAAGCGAGTCACTTGCGTCGATGCGGGCCCTTTTCGTTCATCCCTT
GGCAAACACGGCCGTGATACGTATGTAGCTGCGAATACATTTGCTGCATA
CTGCTGCAGGTCCCTGTCTTCTCTTTCCCCACCTCCCTTCCTGCCCTACC
CCTTACGTACGCTCCTTATGTATTTTATCACGTGCCCCTCCCCCCCCCTC
CCCGACGCATCCTTGTAATTTCTCCTCATCTGTTCCTCTGTCCATGCCCT
TTTTCTTCCTACCCTTTGCCCCTTCATGTTCGCGGGTGTGGCGCGACCAC
AATGCCTGTCACCGCAGGGAGAGTACACTTGGCGGGACGGGAGGGTGTGG
GCGGGGCATTGGAGAGAGGGCAATCCCGTCAAGGTGGGTTCACCGTACTT
TTGTTTGTTTGTTGCCATGCGCACCATCTTTTCCTCTCCTCGTTTATGGT
TTTCTCGGGCGGCATGTGTTGGTGGTAGCGTCTTCTTGCTGTCTTGTTTT
CTTGCTCCACCTGGGGACGTGTAACAGATGAGAGCACGCAACCATCGGAA
GTAGCATGGACGAGACCCGCCCTTGCAAAATTGCCTTCCTTCCCCTCCGA
TGCCTCTGATGTACCTTCTACCTCTACCTGTCATTCGTGTCATAGCAGCG
GCGAATACAGTAGCGGCTGCTCGTCACTTCTCTCCGGCAACGGACTGCAC
CCAATTCCTGCCTGCTGTTTCCCGGCAACACGCGCTCCCGTGCCCGTCAA
ATGCCGCCATTGTTGTGAACCAAGCGTTGTGTCGCCAACCTCCGCGCCGT
CCAAAATTGACCTTGTGTTCCGCCCGCCGTGGTCTCTGCCCTTTGCGGGG
CTCGCTCTATCAATGCTGCGTCCTCCCGACGACTCGCGGTCAATGATCCT
TCATCTATGCATATGGCATTCAAAACATTAGTAGCCCCGCCCCCGCCCTC
CATCTACAGTACCTCCCAATTTTCGCAAGAACTCGCGAACGCCCGAAGCT
CTTAACTTCACCTCTGACCCCTCGGCCTCTATCCACGAGGTCAATAGTCT
AACGAGTACGGCATATGCGTTTGCATGTGTGACCCCCCCGCGCGCGCCCT
GTACCTACCCCGTTCACGTCAGAACTCGAAGCACAGCTCGAAGGAAGAAC
GCTCGGCGCAGCCACCCCCGCAGGAGGGCAGACCTCACGAGCGTAACAAC
TCGGCTGGCTCGGGACTTCTCGGGGACTGCCCCTTGCCGGACGGCAGCAG
CGCTAAGAGCGAGAGCTGCCTTAGCAACGTGAGCGGCGGGGGGGGCAGGA
GCGAGAGCTGGCGCAGCAGCTTGAGCATCAACATGAGCGTCGGCGGAGGC
GGCGGCGGGTCCAAGAGCGAGCTGAGCGTGGGCAAGAACAGCGGGCACGA
AGTTGTTGCGGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGC
AGCAGGAGGAGGAGGAAGATGAAGAGGAGGAGGAGGAAGAAGAGGAAGAG
GAAGACGCCGGACGCGAGGAAGACGAGACTCGTTCTCGTGATCCGCAGCA
GGGGCACGGTAGAGCGGGGTCGGGGCATGCCACCCCCGCCGAGGGACTGC
CGCCCGCAGCGCCCGAACCTAGGAACAGGCACGTGCTGGCGGCCATCAAG
GAGATGCGCGAGCTCAGGCAGCTCACGACGGCGGCCATGGACCGAGCCTC
TGGCGTGGACAGGCTGAAGAAGCCCAACGTCGTAGAAGGGGGCGGCGGCG
GCGGCGGCGGCGGCGGCTGTGGCGGTGGGTCGGACGTCCACGGGGGGGAC
GAGGGCGGCGGCGGCGTCGAGCGGCAGGGGACGGGGAGCACGCTCGCGGG
CACCGTGTCGGAGTGGGACGCATCGCCCGACGCCCAAGCGGGCGGGGTGG
GGGCACCCAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCTGCCG
CAGCAGCAACCGCCGCCGCAGCCGCCGCCGCCGCAGCAGCAGCCGACGAC
AAGGTCGAGAGTCCTGTCGCGCTTCCTGAGCTCCGTCGGCAGGCGAAAGA
GCAGTGTCACGAACACCTCCTCCGAAGACAGGTTCGAGGACCGTTCTTCA
GACAGAGGGACACCCGCGCCCAAGACGGGCAGCGACCTGCCGCCGAAGCA
GCAGCAGCATCAAAACGGCACCGGGGACACCTCCGGTCTGTCGAGGGCCG
CATCAACAGCCTCCGGCGTTTCTCCATCGCCGTCGGCTCTCTCAATCGCC
AGCGGGGAGCACCGTTCCGCGAGGCAACAGCAGGTGGGTCCTGGCGACCA
GTACAACGTCGGGGGTTCTCCCTTCGAGCCCGGCAGCAGGTCCGGGGCGG
GGAACGACGGGATACCTTCGTTTGTCCGGACCCGACGCGCGCACGTCAGC
CAGGCCAGGCGCGGCCTGGTCGAGCAGGTGGCTACGTCGACGCGACAGGC
CCCGGTTGAGCAACAGCGTCGCCGCGGCAGCAGCAAGGGAGGGATGGAGG
ATGCGGCGGCGAGGGCGGCGGCGGGGTTGTCCAACGGCAGCGTCAGCCCG
GCCCGCAGCGCTCGAAGCACCCACAGCACGCGCAGCACGCACAGCTCGCG
CAGCACGCAGAGCTTCCGCAGCACCCACAGCACCCACAGCACCCACAGCT
TCCGGAGCACCCAGAGCGCCCGCAACATCCGCAGTGGGAGCGGCAGCAGC
AGACGGCGAGTCCCGCATCCGGAGGGCATCTTGGAGGAGGAGCAGCCGGA
TACGCGCGGCAGATCACCAAAGACGGACAACAGCGGGCTCTACGGCACTA
GCAGGGGAAGGAGCGGCAAGTCTATATTGGCGGTGGCAGCATCTCCCGCG
CGTGCCGCGCGATCCAAGAGCAGCCGCTCGGTTGCCGCGGGAGACAGCAG
CAGCAGCAGCCGCGGACGCGGGCCGGAGGGGCACGGGAGGCGGGGCAGCA
CCAGCAGCAGCGGCAGGCACGGCAGCGGCGAGCAGCGCGACCGCCACCGC
TCTTCTTCGGTCGGGAGGCACGACCCGCGGCACCGCCGCCGGTCCGAAGA
CGGCGCCGAGGAGAGCGACAGCAGCCGCCGCAGCGAGCGGCCCTCTCGAG
GAGCGGCAAGCCGATCGCGATCTTTCCGTCCCTCCGAGGGCGGCGGCGGC
GGCGACGGCGGCGGCGACGGCGAGGAGGAAGAGGTCGAAGCCGGCGACCT
GTCCTCGGACTTCAGCGAATCGGGAGAGGAGGAAGAGTGTGAAGGAAAAC
GGCGACGCGCCCGGAAGTCGTCCTCGTCCTCCTCGTACTCCAAGGGCCGT
TCCAAGGGAGACGCTGCCGCTTCCTCCTCCGCCCCGCGCATCCCGTCCCG
GCAGCGGCACCAGCGCCACCGGTCGGACGGCGCGGTCGTGTCCCACGAGG
CGAGGCGGCAGGCGGAAGCGGGTTCGGCCGGTGTCGGAGACAACGACGAC
GACGACGCCGAACAAGCGGCGGCGGCGGCGGCGGCCGCGGCCGGTGCTTA
CCCCGACGGCGGCGGCAGGGAAGCCAGGGACCGACGCGCCAAGGCCAAGG
GCTGCGCCGCGCGGGGGCCCCAACCGTCAGTGGCCGCGTTCAAGTCCGTC
AACGGCGGCGGCGGCAGCGGTGGCCAGGAGATACGCGACCTGATAGCGTC
GACGCGGGCCCAGTCCAGCGCGGTCTTCAAGAACGGTGTCGGTGGCGGCG
GTGCGCGCCGCCCCGCCGCCGAGGAGCCGAAGCTGCAGCAGCCCCGTAGC
AGGCGCTCTTCGCGAGAACCCTCCCGGGAACGGCCGCGAGAGCAGTCGAG
GGAGCGAGCCAGCCGTAGCGGACGCGGCGGGTCTCGGAGCGGGAACAGGA
GCGTCACGCCCCGCAGCCGCGCCAAGTTGGTGGGGGCCAACGGCAGCAGC
GGCGGTTTCTTCGCCACCGGAGGAGGCGGCGAGGAGGCAAGGCGACACCA
GCGGCGAGCCTCCTCGCGAGAATCGTCCAGGGAGCGGCCGCGCAAGTCGT
CGTCCCGAGAACCACCGCGGGGTTCGTCGAGAGAGCGGGGTTCGTCGAGA
GAGCGGGGTTCGTCAAGAGAGCGGGGTTCGTCGAGAGAGCGGGTCTACCG
CAACGACGGCGGCGAGCGCGGCCGGAGCGGCGGCCGGAGCGGCGGCCGGA
GCGGCGGTGGCGGCGGGGGGGCGCGCAGCAGGAGCAAGGAAGGCAGAGGG
TCTGGCAGGACGAGGCGTGCCGACGGCGACGGAGCGGCACCGTCTAACCC
CAAGGTGTGTTGTGGGCGGTTGCGTGTGTGTGTTTACAGGCCAAGGTGTG
TTGCAGGCTTTGCTTGGTAGGTGTGTGTTACGCAGGCATGGAGGAATGTC
GGGGGTGGGAGGCGACAGGTCTGCGAGTTTCGGGCGAGGGGTAAAGGAGG
TTTCGCTGCTTCCTTCGGGTGCAACGGAGAATCACTGCGGGGTACGTTTC
GGGATGAGGAGAATAAAGACGCTCTGAATGTTACCGTAGTCGGTAAGCAT
TGAGGGGTGCGTTTCGGGATGAGGCTACAGAAAACCCTAAAGAGTGTTCC
CTTTCGCGTACTGCTGCATTGACCGTGTGTGCGAGCCCAACATTCCCCAT
GAGTTTGCGTCCGGGGTCACCGTCCTGCGGGGGTTTGTATAGGGGAACGT
CCCGCTCTCGTCCACCCACAGCGCACGATCAGCGCGTCTCATTCTCAGCT
GTGGTTTCGACGGCCTTGGACCCCATTGGCCGTCTCAGGACGCCCATATT
TTGGCTGCTGTCGCCCGAATCTAGCATGACTAACCTGACTACTGTGCATG
TATCACACACTTTGAATCAAGACACTCCCAATGGGTGTGCTACCGTTCGC
ATGGGCGGATCGATTTCCAGGCCGAGCTCGCCAATTTCAAAAGGCTCGCT
CGTGTGCTGTTGATTTACTGGTTACCTCCGGTGTGCGTATGCAGTCTTCT
CTGAAGACACGGGTCGGTTTTGGATCCCGATCTCGACGTGCACGTGCTCC
GATCTCCATTAACTGGCAAACACCGATCACGTGTGCCTATTTGTCTCTCC
ATATGCTCTGTGATGGTCGTGAAGATATCTACTTACAGGTAATTGCCTCC
CCTCTCGTTTGTCCCCGTGCTGTGAAGCCTCCTCAGGTAAAAATTTCGTT
CGATGGTGGCGTTCCGTACGGAGTGGGCGACTACACCGGCGCCGTCAAGG
ACGGGGTGCCGGATGGACAG

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6540:786..7855+

>mRNA_Ecto-sp13_S_contig6540.17354.1 ID=mRNA_Ecto-sp13_S_contig6540.17354.1|Name=mRNA_Ecto-sp13_S_contig6540.17354.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3621bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6540:786..7855+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTGTGGCACATCGGGAAGAAGTACCGGGGCGAGTGGAAGGAGGGCAA
GAGAGACGGCAAGGGGTGGCAGCGTTGGACGGATGGAAGGACGTTCGACG
GAGAGTGGAAAGACGGGAAGCCGCATGGGAAGGGCTACTGGACATCGCCA
AGGGGCGAGGCCTACGACGGAAATCTCGTTCGAGGGAAGAAGAGCGGCGA
GGGTACATTCACATACCCCGACGGTAAATCTTACACGGGGACCTGGTTGA
ACGGTCTACGTCACGGCGAGGGCACGAGGTATTACCCCGACGGCAGCATA
TACAGGGGCTCCTGGGCTTACGACAAGCGGCACGGCGTGGGAGAGTACAC
TTGGCGGGACGGGAGGGTGTGGGCGGGGCATTGGAGAGAGGGCAATCCCG
TCAAGAACTCGAAGCACAGCTCGAAGGAAGAACGCTCGGCGCAGCCACCC
CCGCAGGAGGGCAGACCTCACGAGCGTAACAACTCGGCTGGCTCGGGACT
TCTCGGGGACTGCCCCTTGCCGGACGGCAGCAGCGCTAAGAGCGAGAGCT
GCCTTAGCAACGTGAGCGGCGGGGGGGGCAGGAGCGAGAGCTGGCGCAGC
AGCTTGAGCATCAACATGAGCGTCGGCGGAGGCGGCGGCGGGTCCAAGAG
CGAGCTGAGCGTGGGCAAGAACAGCGGGCACGAAGTTGTTGCGGAAGAAG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCAGCAGGAGGAGGAGGAA
GATGAAGAGGAGGAGGAGGAAGAAGAGGAAGAGGAAGACGCCGGACGCGA
GGAAGACGAGACTCGTTCTCGTGATCCGCAGCAGGGGCACGGTAGAGCGG
GGTCGGGGCATGCCACCCCCGCCGAGGGACTGCCGCCCGCAGCGCCCGAA
CCTAGGAACAGGCACGTGCTGGCGGCCATCAAGGAGATGCGCGAGCTCAG
GCAGCTCACGACGGCGGCCATGGACCGAGCCTCTGGCGTGGACAGGCTGA
AGAAGCCCAACGTCGTAGAAGGGGGCGGCGGCGGCGGCGGCGGCGGCGGC
TGTGGCGGTGGGTCGGACGTCCACGGGGGGGACGAGGGCGGCGGCGGCGT
CGAGCGGCAGGGGACGGGGAGCACGCTCGCGGGCACCGTGTCGGAGTGGG
ACGCATCGCCCGACGCCCAAGCGGGCGGGGTGGGGGCACCCAAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCCGCTGCCGCAGCAGCAACCGCCGCC
GCAGCCGCCGCCGCCGCAGCAGCAGCCGACGACAAGGTCGAGAGTCCTGT
CGCGCTTCCTGAGCTCCGTCGGCAGGCGAAAGAGCAGTGTCACGAACACC
TCCTCCGAAGACAGGTTCGAGGACCGTTCTTCAGACAGAGGGACACCCGC
GCCCAAGACGGGCAGCGACCTGCCGCCGAAGCAGCAGCAGCATCAAAACG
GCACCGGGGACACCTCCGGTCTGTCGAGGGCCGCATCAACAGCCTCCGGC
GTTTCTCCATCGCCGTCGGCTCTCTCAATCGCCAGCGGGGAGCACCGTTC
CGCGAGGCAACAGCAGGTGGGTCCTGGCGACCAGTACAACGTCGGGGGTT
CTCCCTTCGAGCCCGGCAGCAGGTCCGGGGCGGGGAACGACGGGATACCT
TCGTTTGTCCGGACCCGACGCGCGCACGTCAGCCAGGCCAGGCGCGGCCT
GGTCGAGCAGGTGGCTACGTCGACGCGACAGGCCCCGGTTGAGCAACAGC
GTCGCCGCGGCAGCAGCAAGGGAGGGATGGAGGATGCGGCGGCGAGGGCG
GCGGCGGGGTTGTCCAACGGCAGCGTCAGCCCGGCCCGCAGCGCTCGAAG
CACCCACAGCACGCGCAGCACGCACAGCTCGCGCAGCACGCAGAGCTTCC
GCAGCACCCACAGCACCCACAGCACCCACAGCTTCCGGAGCACCCAGAGC
GCCCGCAACATCCGCAGTGGGAGCGGCAGCAGCAGACGGCGAGTCCCGCA
TCCGGAGGGCATCTTGGAGGAGGAGCAGCCGGATACGCGCGGCAGATCAC
CAAAGACGGACAACAGCGGGCTCTACGGCACTAGCAGGGGAAGGAGCGGC
AAGTCTATATTGGCGGTGGCAGCATCTCCCGCGCGTGCCGCGCGATCCAA
GAGCAGCCGCTCGGTTGCCGCGGGAGACAGCAGCAGCAGCAGCCGCGGAC
GCGGGCCGGAGGGGCACGGGAGGCGGGGCAGCACCAGCAGCAGCGGCAGG
CACGGCAGCGGCGAGCAGCGCGACCGCCACCGCTCTTCTTCGGTCGGGAG
GCACGACCCGCGGCACCGCCGCCGGTCCGAAGACGGCGCCGAGGAGAGCG
ACAGCAGCCGCCGCAGCGAGCGGCCCTCTCGAGGAGCGGCAAGCCGATCG
CGATCTTTCCGTCCCTCCGAGGGCGGCGGCGGCGGCGACGGCGGCGGCGA
CGGCGAGGAGGAAGAGGTCGAAGCCGGCGACCTGTCCTCGGACTTCAGCG
AATCGGGAGAGGAGGAAGAGTGTGAAGGAAAACGGCGACGCGCCCGGAAG
TCGTCCTCGTCCTCCTCGTACTCCAAGGGCCGTTCCAAGGGAGACGCTGC
CGCTTCCTCCTCCGCCCCGCGCATCCCGTCCCGGCAGCGGCACCAGCGCC
ACCGGTCGGACGGCGCGGTCGTGTCCCACGAGGCGAGGCGGCAGGCGGAA
GCGGGTTCGGCCGGTGTCGGAGACAACGACGACGACGACGCCGAACAAGC
GGCGGCGGCGGCGGCGGCCGCGGCCGGTGCTTACCCCGACGGCGGCGGCA
GGGAAGCCAGGGACCGACGCGCCAAGGCCAAGGGCTGCGCCGCGCGGGGG
CCCCAACCGTCAGTGGCCGCGTTCAAGTCCGTCAACGGCGGCGGCGGCAG
CGGTGGCCAGGAGATACGCGACCTGATAGCGTCGACGCGGGCCCAGTCCA
GCGCGGTCTTCAAGAACGGTGTCGGTGGCGGCGGTGCGCGCCGCCCCGCC
GCCGAGGAGCCGAAGCTGCAGCAGCCCCGTAGCAGGCGCTCTTCGCGAGA
ACCCTCCCGGGAACGGCCGCGAGAGCAGTCGAGGGAGCGAGCCAGCCGTA
GCGGACGCGGCGGGTCTCGGAGCGGGAACAGGAGCGTCACGCCCCGCAGC
CGCGCCAAGTTGGTGGGGGCCAACGGCAGCAGCGGCGGTTTCTTCGCCAC
CGGAGGAGGCGGCGAGGAGGCAAGGCGACACCAGCGGCGAGCCTCCTCGC
GAGAATCGTCCAGGGAGCGGCCGCGCAAGTCGTCGTCCCGAGAACCACCG
CGGGGTTCGTCGAGAGAGCGGGGTTCGTCGAGAGAGCGGGGTTCGTCAAG
AGAGCGGGGTTCGTCGAGAGAGCGGGTCTACCGCAACGACGGCGGCGAGC
GCGGCCGGAGCGGCGGCCGGAGCGGCGGCCGGAGCGGCGGTGGCGGCGGG
GGGGCGCGCAGCAGGAGCAAGGAAGGCAGAGGGTCTGGCAGGACGAGGCG
TGCCGACGGCGACGGAGCGGCACCGTCTAACCCCAAGGTAAAAATTTCGT
TCGATGGTGGCGTTCCGTACGGAGTGGGCGACTACACCGGCGCCGTCAAG
GACGGGGTGCCGGATGGACAG