prot_Ecto-sp13_S_contig6533.17343.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6533.17343.1
Unique Nameprot_Ecto-sp13_S_contig6533.17343.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length284
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6533.17343.1 vs. uniprot
Match: D8LQG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQG4_ECTSI)

HSP 1 Score: 415 bits (1067), Expect = 9.750e-144
Identity = 255/283 (90.11%), Postives = 263/283 (92.93%), Query Frame = 0 
Query:    1 MRANSEHWRVRYPQRTPIPRRPSTRFDARRAAVGPTAAGADSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVEFVSNKRAAGGPATDHGRAVRFDRVVKLILVPSRLDLSAGLSDELWWNEDDYLQFRLGAIVEGSSGVLGRTLRNKRSRRIQPPAAARPTYKHGPKIAQVLETMDGHGGGTLPPIRRQLKVHVSSSPSFRVQPVTPPPSPANANESSIGRGIADDMDHPDASVPSPRRKDHEGWTFAEGLGGLVGLGLLQGSVDP 283
            MRANSEHWRVRYPQRTPIPRRPSTRFDARR+AVGP AA ADSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    GVE VSNKRAAGGPA DHGRAVRFDRVVKLILVPSRLDLSAGLSDELWWNEDDYLQFRLGAIVEGSSGVLGRTLRNKRS+RIQPPAAARPTY+HG KIAQ LE MDGHGG T PPIRRQ KVH+SSSPSFRVQPVTPPPSPANANE+SIGRG+AD+MDHPDAS  SPRRK H+GWTFAEG  GLVGLGLL GSVDP
Sbjct:   38 MRANSEHWRVRYPQRTPIPRRPSTRFDARRSAVGPAAARADSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGTGVELVSNKRAAGGPAADHGRAVRFDRVVKLILVPSRLDLSAGLSDELWWNEDDYLQFRLGAIVEGSSGVLGRTLRNKRSKRIQPPAAARPTYQHG-KIAQALERMDGHGGSTRPPIRRQFKVHLSSSPSFRVQPVTPPPSPANANETSIGRGVADEMDHPDASGSSPRRKGHKGWTFAEGFDGLVGLGLLPGSVDP 319
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6533.17343.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQG4_ECTSI9.750e-14490.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6533contigEcto-sp13_S_contig6533:89..1722 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6533.17343.1mRNA_Ecto-sp13_S_contig6533.17343.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6533 88..2303 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6533.17343.1 ID=prot_Ecto-sp13_S_contig6533.17343.1|Name=mRNA_Ecto-sp13_S_contig6533.17343.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=284bp
MRANSEHWRVRYPQRTPIPRRPSTRFDARRAAVGPTAAGADSPPPPLLFD
QRQRSSSRKLFLSPAGRRPPDDHRVVQHAASAAAGGAGVEFVSNKRAAGG
PATDHGRAVRFDRVVKLILVPSRLDLSAGLSDELWWNEDDYLQFRLGAIV
EGSSGVLGRTLRNKRSRRIQPPAAARPTYKHGPKIAQVLETMDGHGGGTL
PPIRRQLKVHVSSSPSFRVQPVTPPPSPANANESSIGRGIADDMDHPDAS
VPSPRRKDHEGWTFAEGLGGLVGLGLLQGSVDP*
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