mRNA_Ecto-sp13_S_contig6524.17333.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6524.17333.1 vs. uniprot
Match: D8LBC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBC4_ECTSI) HSP 1 Score: 332 bits (851), Expect = 2.640e-114 Identity = 173/182 (95.05%), Postives = 176/182 (96.70%), Query Frame = 1
Query: 1 RLGEPKRALRCLRRAAELGRRSCGSEHLEVTHLNACAVLSELGRHEEALEHARSAVYHGQELEGAGTHTGVAAETGRSQEGRASPSAGVGGSRKARLATLAVSYYNLAVELEYTHRYEACLRWYGEAVQLARDPDVHNEELLRTFQRSFAGARKKYAPLQLGRPGGAKKGPTTSGAVPIRCF 546
RLGEPKRALRCLRRAAELGRRSCGSEHLEVTHLNACAVLSELGRHEEALEHARSAVYHGQELEGAGTH GVAAETGR+QEGRAS SAGVGGSRKARLATLAVSYYNLAVELEYTHRYEACLRWYGEAVQLARD DVHNEELL+TFQRSFAGARKKYAPLQLGR GGAKKGP+T AVPIRCF
Sbjct: 27 RLGEPKRALRCLRRAAELGRRSCGSEHLEVTHLNACAVLSELGRHEEALEHARSAVYHGQELEGAGTHAGVAAETGRNQEGRASSSAGVGGSRKARLATLAVSYYNLAVELEYTHRYEACLRWYGEAVQLARDQDVHNEELLKTFQRSFAGARKKYAPLQLGRSGGAKKGPSTR-AVPIRCF 207
BLAST of mRNA_Ecto-sp13_S_contig6524.17333.1 vs. uniprot
Match: D0MU31_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MU31_PHYIT) HSP 1 Score: 105 bits (262), Expect = 4.070e-23 Identity = 67/158 (42.41%), Postives = 99/158 (62.66%), Query Frame = 1
Query: 4 LGEPKRALRCLRRAAELGRRSCGSEHLEVTHLNACAVLSELGRHEEALEHARSAVYHGQE----LEGAGTHTGVAAETGRSQEGRASPSAGVGGSRKARLATLAVSYYNLAVELEYTHRYEACLRWYGEAVQLARDPDVHNEELLRTFQRSFAGARKK 465
LG+ K AL+ L+ AA++G S ++L +THLN CA+ S+LGRH+ ALEHA++A++H QE LEG G E R Q+ + + R+ ++ +LAV+Y+NLAVELE+ R EA L+WY +A+QL NE L +F++ F A+KK
Sbjct: 104 LGKLKSALKYLKEAAQIGSGSAHVKNLSITHLNLCAIQSQLGRHDLALEHAQAAIFHTQEELVSLEG-----GARDEDDRDQDALDAKT------REEKIISLAVAYHNLAVELEFNGRGEASLQWYKKALQLVWKYRETNEALCESFKKIFLDAKKK 250
BLAST of mRNA_Ecto-sp13_S_contig6524.17333.1 vs. uniprot
Match: A0A833SRZ9_PHYIN (IQ calmodulin binding motif-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SRZ9_PHYIN) HSP 1 Score: 105 bits (262), Expect = 5.260e-23 Identity = 67/158 (42.41%), Postives = 99/158 (62.66%), Query Frame = 1
Query: 4 LGEPKRALRCLRRAAELGRRSCGSEHLEVTHLNACAVLSELGRHEEALEHARSAVYHGQE----LEGAGTHTGVAAETGRSQEGRASPSAGVGGSRKARLATLAVSYYNLAVELEYTHRYEACLRWYGEAVQLARDPDVHNEELLRTFQRSFAGARKK 465
LG+ K AL+ L+ AA++G S ++L +THLN CA+ S+LGRH+ ALEHA++A++H QE LEG G E R Q+ + + R+ ++ +LAV+Y+NLAVELE+ R EA L+WY +A+QL NE L +F++ F A+KK
Sbjct: 163 LGKLKSALKYLKEAAQIGSGSAHVKNLSITHLNLCAIQSQLGRHDLALEHAQAAIFHTQEELVSLEG-----GARDEDDRDQDALDAKT------REEKIISLAVAYHNLAVELEFNGRGEASLQWYKKALQLVWKYRETNEALCESFKKIFLDAKKK 309
BLAST of mRNA_Ecto-sp13_S_contig6524.17333.1 vs. uniprot
Match: A0A8J5IVD3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IVD3_9STRA) HSP 1 Score: 105 bits (261), Expect = 6.130e-23 Identity = 65/154 (42.21%), Postives = 96/154 (62.34%), Query Frame = 1
Query: 4 LGEPKRALRCLRRAAELGRRSCGSEHLEVTHLNACAVLSELGRHEEALEHARSAVYHGQELEGAGTHTGVAAETGRSQEGRASPSAGVGGSRKARLATLAVSYYNLAVELEYTHRYEACLRWYGEAVQLARDPDVHNEELLRTFQRSFAGARKK 465
LG+ K AL+ L+ AA++G S ++L +THLN CA+ S+LGRH+ ALEHA++A++H QE E G G E Q+ + R+ ++ +LAV+Y+NLAVELE+ R EA L+WY +A+QL NE L +F++ F A+KK
Sbjct: 156 LGKLKSALKYLKEAAQIGSGSAHVKNLSITHLNLCAIQSQLGRHDLALEHAQAAIFHTQE-ELVGLEDGARDEDDSDQDALDPKT------REEKIISLAVAYHNLAVELEFNGRGEASLQWYKKALQLVWKYRESNEALCESFKKIFLDAKKK 302
BLAST of mRNA_Ecto-sp13_S_contig6524.17333.1 vs. uniprot
Match: A0A0W8CMP5_PHYNI (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CMP5_PHYNI) HSP 1 Score: 105 bits (261), Expect = 6.590e-23 Identity = 65/154 (42.21%), Postives = 96/154 (62.34%), Query Frame = 1
Query: 4 LGEPKRALRCLRRAAELGRRSCGSEHLEVTHLNACAVLSELGRHEEALEHARSAVYHGQELEGAGTHTGVAAETGRSQEGRASPSAGVGGSRKARLATLAVSYYNLAVELEYTHRYEACLRWYGEAVQLARDPDVHNEELLRTFQRSFAGARKK 465
LG+ K AL+ L+ AA++G S ++L +THLN CA+ S+LGRH+ ALEHA++A++H QE E G E R Q+ + R+ ++ +LAV+Y+NLAVELE+ R EA L+WY +A+QL NE L +F++ F A+KK
Sbjct: 163 LGKLKSALKYLKEAAQIGSGSAHVKNLSITHLNLCAIQSQLGRHDLALEHAQAAIFHTQE-ELVSLEDGARDEDDRDQDALDPKT------REEKIISLAVAYHNLAVELEFNGRGEASLQWYKKALQLVWKYKETNEALCESFKKIFLDAKKK 309
BLAST of mRNA_Ecto-sp13_S_contig6524.17333.1 vs. uniprot
Match: W2RHN2_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2RHN2_PHYPN) HSP 1 Score: 105 bits (261), Expect = 6.960e-23 Identity = 65/154 (42.21%), Postives = 96/154 (62.34%), Query Frame = 1
Query: 4 LGEPKRALRCLRRAAELGRRSCGSEHLEVTHLNACAVLSELGRHEEALEHARSAVYHGQELEGAGTHTGVAAETGRSQEGRASPSAGVGGSRKARLATLAVSYYNLAVELEYTHRYEACLRWYGEAVQLARDPDVHNEELLRTFQRSFAGARKK 465
LG+ K AL+ L+ AA++G S ++L +THLN CA+ S+LGRH+ ALEHA++A++H QE E G E R Q+ + R+ ++ +LAV+Y+NLAVELE+ R EA L+WY +A+QL NE L +F++ F A+KK
Sbjct: 91 LGKLKSALKYLKEAAQIGSGSAHVKNLSITHLNLCAIQSQLGRHDLALEHAQAAIFHTQE-ELVSLEDGARDEDDRDQDALDPKT------REEKIISLAVAYHNLAVELEFNGRGEASLQWYKKALQLVWKYKETNEALCESFKKIFLDAKKK 237
BLAST of mRNA_Ecto-sp13_S_contig6524.17333.1 vs. uniprot
Match: A0A329SRD8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SRD8_9STRA) HSP 1 Score: 105 bits (261), Expect = 7.150e-23 Identity = 65/154 (42.21%), Postives = 96/154 (62.34%), Query Frame = 1
Query: 4 LGEPKRALRCLRRAAELGRRSCGSEHLEVTHLNACAVLSELGRHEEALEHARSAVYHGQELEGAGTHTGVAAETGRSQEGRASPSAGVGGSRKARLATLAVSYYNLAVELEYTHRYEACLRWYGEAVQLARDPDVHNEELLRTFQRSFAGARKK 465
LG+ K AL+ L+ AA++G S ++L +THLN CA+ S+LGRH+ ALEHA++A++H QE E G G E Q+ + R+ ++ +LAV+Y+NLAVELE+ R EA L+WY +A+QL NE L +F++ F A+KK
Sbjct: 156 LGKLKSALKYLKEAAQIGSGSAHVKNLSITHLNLCAIQSQLGRHDLALEHAQAAIFHTQE-ELVGLEDGARDEDDSDQDALDPKT------REEKIISLAVAYHNLAVELEFNGRGEASLQWYKKALQLVWKYRESNEALCESFKKIFLDAKKK 302
BLAST of mRNA_Ecto-sp13_S_contig6524.17333.1 vs. uniprot
Match: V9FZ97_PHYPR (Uncharacterized protein n=5 Tax=Phytophthora parasitica TaxID=4792 RepID=V9FZ97_PHYPR) HSP 1 Score: 105 bits (261), Expect = 7.160e-23 Identity = 65/154 (42.21%), Postives = 96/154 (62.34%), Query Frame = 1
Query: 4 LGEPKRALRCLRRAAELGRRSCGSEHLEVTHLNACAVLSELGRHEEALEHARSAVYHGQELEGAGTHTGVAAETGRSQEGRASPSAGVGGSRKARLATLAVSYYNLAVELEYTHRYEACLRWYGEAVQLARDPDVHNEELLRTFQRSFAGARKK 465
LG+ K AL+ L+ AA++G S ++L +THLN CA+ S+LGRH+ ALEHA++A++H QE E G E R Q+ + R+ ++ +LAV+Y+NLAVELE+ R EA L+WY +A+QL NE L +F++ F A+KK
Sbjct: 163 LGKLKSALKYLKEAAQIGSGSAHVKNLSITHLNLCAIQSQLGRHDLALEHAQAAIFHTQE-ELVSLEDGARDEDDRDQDALDPKT------REEKIISLAVAYHNLAVELEFNGRGEASLQWYKKALQLVWKYKETNEALCESFKKIFLDAKKK 309
BLAST of mRNA_Ecto-sp13_S_contig6524.17333.1 vs. uniprot
Match: A0A1V9Y8S7_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y8S7_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.370e-22 Identity = 63/156 (40.38%), Postives = 96/156 (61.54%), Query Frame = 1
Query: 1 RLGEPKRALRCLRRAAELGRRSCGSEHLEVTHLNACAVLSELGRHEEALEHARSAVYHGQELEGAGTHTGVAAETGRSQEGRASPSAGVGGSRKARLATLAVSYYNLAVELEYTHRYEACLRWYGEAVQLARDPDVHNEELLRTFQRSFAGARKKY 468
R+ + K AL+ L +AA LG + ++L VTHLN CA+ S+LGRH+ ALEHA+SA++H QE E S+ S SR+ ++ LA++Y+N+AVELE+ R +AC++WY +A+Q+ +N +L RTF+ SF A+KK+
Sbjct: 109 RMKKLKTALKYLTQAASLGGSAHQVKNLSVTHLNLCAIQSQLGRHDVALEHAQSAIFHAQE------------ELVISEGSNDSNDVLDAQSREEKIVALAIAYHNMAVELEFNSRGDACIQWYKKALQMVFKYKDNNADLWRTFKASFDSAKKKH 252
BLAST of mRNA_Ecto-sp13_S_contig6524.17333.1 vs. uniprot
Match: A0A1V9Y9I1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y9I1_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.860e-22 Identity = 64/157 (40.76%), Postives = 97/157 (61.78%), Query Frame = 1
Query: 1 RLGEPKRALRCLRRAAELGRRSCGSEHLEVTHLNACAVLSELGRHEEALEHARSAVYHGQELEGAGTHTGVAAETGRSQEGRASPSAGVGGSRKARLATLAVSYYNLAVELEYTHRYEACLRWYGEAVQLARDPDVHNEELLRTFQRSFAGARKKYA 471
RL + K AL+ L +AA LG + +L VTHLN CA+ S+LGRH+ ALEHA+SA++H QE G AA+ +Q +R+ ++ LA++Y+NLAVELE+THR + L+WY +A+Q+A N +L +TF+ S A++K++
Sbjct: 116 RLRKLKTALKYLEQAASLGATTENVRNLSVTHLNLCAIQSQLGRHDVALEHAQSAIFHAQEELVMGDDDTNAADVLDAQ------------TREEKVMALAIAYHNLAVELEFTHRGASSLQWYKKAMQMAFKYKDANADLWKTFKTSLDAAKRKHS 260 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6524.17333.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6524.17333.1 >prot_Ecto-sp13_S_contig6524.17333.1 ID=prot_Ecto-sp13_S_contig6524.17333.1|Name=mRNA_Ecto-sp13_S_contig6524.17333.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=183bp RLGEPKRALRCLRRAAELGRRSCGSEHLEVTHLNACAVLSELGRHEEALEback to top mRNA from alignment at Ecto-sp13_S_contig6524:353..1702- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6524.17333.1 ID=mRNA_Ecto-sp13_S_contig6524.17333.1|Name=mRNA_Ecto-sp13_S_contig6524.17333.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1350bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6524:353..1702- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6524:353..1702- >mRNA_Ecto-sp13_S_contig6524.17333.1 ID=mRNA_Ecto-sp13_S_contig6524.17333.1|Name=mRNA_Ecto-sp13_S_contig6524.17333.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=549bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6524:353..1702- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |