prot_Ecto-sp13_S_contig6505.17300.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6505.17300.1
Unique Nameprot_Ecto-sp13_S_contig6505.17300.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length800
Homology
BLAST of mRNA_Ecto-sp13_S_contig6505.17300.1 vs. uniprot
Match: A0A6H5L9R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9R2_9PHAE)

HSP 1 Score: 500 bits (1287), Expect = 8.000e-169
Identity = 304/338 (89.94%), Postives = 312/338 (92.31%), Query Frame = 0
Query:    1 MGGERTQSGTGDTRAIPQGEEEFVVVDDDGLNLEDTGAEPAGQDAAPFSPGAFPALGASLSAGVAFAPPSSTTQQSQNLRMPSTDATAAGAATPDAAAAGAVVAALDRVYKALCAYAIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHEALRLLEATCSGVRSAWQRWQERGPASVKCVVKKRFFPVLVAVALSLLLVLPAYWAIPRGGGSGNDDGSERLSARQWQAKYDLLSSKFSADTVRQRLKYDSLAGRHLELQAEYESLLKDYKIQQRANRARSLPKTPPETCSKSESVLGPAKEALKLAEQSAYEYLSHFAEGLREDVHEIAELY 338
            MGGERTQSGTGDTRAIPQGEEEFVVVDDDGLNL+D+GAEPAGQDAAPFSPGAFPALGASLSAGVAFAPPSSTTQQSQN RMPSTDA A GAA P     GAVVAALD VYKALCAY+IAG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ALHEAL LLEA CS VRSAW+RWQERG ASVK VVKKRFFPVLVAVALSLLLVLPAYW IPRGG  GNDDG ERLS RQWQAKYDLLSSKFSADTVRQRLKYDSLAGRHLELQAEYESLLKDYKIQQRANRARSLPKTPPETCSKSESVLGPAKEALK  EQSAYEYLSHFA+GLR+DVHE+  L+
Sbjct:    1 MGGERTQSGTGDTRAIPQGEEEFVVVDDDGLNLQDSGAEPAGQDAAPFSPGAFPALGASLSAGVAFAPPSSTTQQSQNPRMPSTDAAAVGAAAPXXXXXGAVVAALDLVYKALCAYSIAGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVALHEALGLLEAMCSWVRSAWRRWQERGLASVKRVVKKRFFPVLVAVALSLLLVLPAYWTIPRGGDGGNDDGPERLSVRQWQAKYDLLSSKFSADTVRQRLKYDSLAGRHLELQAEYESLLKDYKIQQRANRARSLPKTPPETCSKSESVLGPAKEALKFVEQSAYEYLSHFADGLRQDVHEVKGLF 338          
BLAST of mRNA_Ecto-sp13_S_contig6505.17300.1 vs. uniprot
Match: D7FYG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYG5_ECTSI)

HSP 1 Score: 384 bits (986), Expect = 1.000e-120
Identity = 223/328 (67.99%), Postives = 239/328 (72.87%), Query Frame = 0
Query:  388 KPDGGMKEERGVGDDERTLRAALREQYADRLDGGKEGGGVGGGERSSGGISTNRSGKHDGMTEERGGDGKRGLRAALREKVAMQRAASLKQTTDRQDGGRRAPHVDGTPSQDQGERKITEEPRDEVRTFDAEYWRTIKAGPERGVRFDRSGRRVVQKRGWVRYYSNAVRTGTAVRLDMTEELEPSPRKKMKAALTPSTRNHEPEETLSLENSGRSGEVRSGDKDAEESAKLSTGRQAVEDAEAVGLDDNLEDYYQAGVANLRSCKNEATDFIESRSIHCRSGGFGLSSVDQKPKNAKPKGHMAIQDGEELRADKSDGVEVENRSKKGC 715
            K DG MKEERG  DDE  LRAALREQYA+R  GGKE                   GKH GMTEERGGDG RGLRAA+REK+A QRAA+L+QTTDRQD GRRAPHVDGTP Q QGERK TEEPRDEVRTFDAE WRTIKAGPERGVRFDRSG RVVQKRGWVRYY NA+RTGTAVRL  TEELEPSPR+  KAA                            DKDAE SAKLSTGRQAVEDAEA GLDDNL++YYQ  +A L+S + EAT++ E +SIH RS G  LS  DQKPKNAKPKGHMAIQ GEEL   KSDGV+VE RSKKGC
Sbjct:  181 KCDGSMKEERGGRDDETALRAALREQYAERFHGGKEXXXXXXXXXXXXXXXXXDFGKHGGMTEERGGDGNRGLRAAVREKIAKQRAAALEQTTDRQDDGRRAPHVDGTPPQVQGERKTTEEPRDEVRTFDAEQWRTIKAGPERGVRFDRSGTRVVQKRGWVRYYGNAIRTGTAVRLGTTEELEPSPRQNTKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXEDKDAEGSAKLSTGRQAVEDAEAAGLDDNLKEYYQVVLAKLKSSRKEATEYKELKSIHGRSSGVELSRADQKPKNAKPKGHMAIQGGEELTTGKSDGVDVEKRSKKGC 508          
BLAST of mRNA_Ecto-sp13_S_contig6505.17300.1 vs. uniprot
Match: D7FYG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYG6_ECTSI)

HSP 1 Score: 333 bits (854), Expect = 1.110e-105
Identity = 174/182 (95.60%), Postives = 176/182 (96.70%), Query Frame = 0
Query:  153 ALHEALRLLEATCSGVRSAWQRWQERGPASVKCVVKKRFFPVLVAVALSLLLVLPAYWAIPRGGGSGNDDGSERLSARQWQAKYDLLSSKFSADTVRQRLKYDSLAGRHLELQAEYESLLKDYKIQQRANRARSLPKTPPETCSKSESVLGPAKEALKLAEQSAYEYLSHFAEGLREDVHEI 334
            ALHEAL LLEA CS VRSAWQRWQERGPASVK VVKKRFFPVLVAVALSLLLVLPAYWAIPRGGG GNDDG ERLSARQWQA+YDLLSSKFSADTVRQRLKYDSLAGRHLELQAEYESLLKDYKIQQRANRARSLPKTPPETCSKSESVLGPAKEALKLAEQSAYEYLSHFAEGLREDVHE+
Sbjct:   13 ALHEALGLLEAACSWVRSAWQRWQERGPASVKRVVKKRFFPVLVAVALSLLLVLPAYWAIPRGGG-GNDDGPERLSARQWQAEYDLLSSKFSADTVRQRLKYDSLAGRHLELQAEYESLLKDYKIQQRANRARSLPKTPPETCSKSESVLGPAKEALKLAEQSAYEYLSHFAEGLREDVHEV 193          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6505.17300.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L9R2_9PHAE8.000e-16989.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYG5_ECTSI1.000e-12067.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FYG6_ECTSI1.110e-10595.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 213..799
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..190
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 191..212
NoneNo IPR availableTMHMMTMhelixcoord: 191..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6505contigEcto-sp13_S_contig6505:109..5710 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6505.17300.1mRNA_Ecto-sp13_S_contig6505.17300.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6505 105..7896 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6505.17300.1 ID=prot_Ecto-sp13_S_contig6505.17300.1|Name=mRNA_Ecto-sp13_S_contig6505.17300.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=800bp
MGGERTQSGTGDTRAIPQGEEEFVVVDDDGLNLEDTGAEPAGQDAAPFSP
GAFPALGASLSAGVAFAPPSSTTQQSQNLRMPSTDATAAGAATPDAAAAG
AVVAALDRVYKALCAYAIAGYKFLHAHGAVAYNFVYTHAAMAFEFVYAYA
AVALHEALRLLEATCSGVRSAWQRWQERGPASVKCVVKKRFFPVLVAVAL
SLLLVLPAYWAIPRGGGSGNDDGSERLSARQWQAKYDLLSSKFSADTVRQ
RLKYDSLAGRHLELQAEYESLLKDYKIQQRANRARSLPKTPPETCSKSES
VLGPAKEALKLAEQSAYEYLSHFAEGLREDVHEIAELYVGMMFKEVGGGE
HSSGGSSNNRFDDKSDGIIKEGGGVGGGESSSGGSSAKPDGGMKEERGVG
DDERTLRAALREQYADRLDGGKEGGGVGGGERSSGGISTNRSGKHDGMTE
ERGGDGKRGLRAALREKVAMQRAASLKQTTDRQDGGRRAPHVDGTPSQDQ
GERKITEEPRDEVRTFDAEYWRTIKAGPERGVRFDRSGRRVVQKRGWVRY
YSNAVRTGTAVRLDMTEELEPSPRKKMKAALTPSTRNHEPEETLSLENSG
RSGEVRSGDKDAEESAKLSTGRQAVEDAEAVGLDDNLEDYYQAGVANLRS
CKNEATDFIESRSIHCRSGGFGLSSVDQKPKNAKPKGHMAIQDGEELRAD
KSDGVEVENRSKKGCKKVKSKDRSKDKPKDKSKHKLKDKSKDNRRTSRRT
SRRTSRRTSRRTSRRTSRRTSRRTSRRTSRRTSRRTSRRTSRRASRRAS*
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