mRNA_Ecto-sp13_S_contig6504.17299.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6504.17299.1 vs. uniprot
Match: D8LC51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC51_ECTSI) HSP 1 Score: 290 bits (743), Expect = 9.270e-88 Identity = 156/157 (99.36%), Postives = 157/157 (100.00%), Query Frame = 3
Query: 3 ANEGIELLREKVDTLIVIANDKLLQIVPEDTPVQDAFLVADDILRQGVVGISEIIIKPGLINVDFADVRSVMNKAGTALMGLGKAKGKNRAAEAARAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYANVDPDANIIFGALVDADVA 473
ANEGIELLREKVDTLIVIANDKLLQIVPEDTPVQDAFLVADDILRQGVVGISEIIIKPGL+NVDFADVRSVMNKAGTALMGLGKAKGKNRAAEAARAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYANVDPDANIIFGALVDADVA
Sbjct: 319 ANEGIELLREKVDTLIVIANDKLLQIVPEDTPVQDAFLVADDILRQGVVGISEIIIKPGLVNVDFADVRSVMNKAGTALMGLGKAKGKNRAAEAARAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYANVDPDANIIFGALVDADVA 475
BLAST of mRNA_Ecto-sp13_S_contig6504.17299.1 vs. uniprot
Match: A0A835ZJQ7_9STRA (Tubulin/FtsZ, GTPase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJQ7_9STRA) HSP 1 Score: 255 bits (651), Expect = 1.500e-74 Identity = 137/170 (80.59%), Postives = 152/170 (89.41%), Query Frame = 3
Query: 3 ANEGIELLREKVDTLIVIANDKLLQIVPEDTPVQDAFLVADDILRQGVVGISEIIIKPGLINVDFADVRSVMNKAGTALMGLGKAKGKNRAAEAARAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYANVDPDANIIFGALVDADVASGELHITVLATGF 512
A E I L+ +VDTLIV++NDKLLQIVPE+TP+Q+AFLVADDILRQGVVGISEIIIKPGL+NVDFADVRSVM+ AGTALMG+G+ KGK RA++AA AAI SPLLDFPV A+GIVFNIIGD DLTLAEINEAA VIY NVDPDANIIFGALVD +A GELHITVLATGF
Sbjct: 261 ATEAITELKARVDTLIVVSNDKLLQIVPENTPLQEAFLVADDILRQGVVGISEIIIKPGLVNVDFADVRSVMSNAGTALMGVGRGKGKTRASDAAHAAISSPLLDFPVKQARGIVFNIIGDKDLTLAEINEAAQVIYRNVDPDANIIFGALVDPALA-GELHITVLATGF 429
BLAST of mRNA_Ecto-sp13_S_contig6504.17299.1 vs. uniprot
Match: A0A7S2GNE8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GNE8_9STRA) HSP 1 Score: 237 bits (604), Expect = 4.170e-69 Identity = 129/171 (75.44%), Postives = 146/171 (85.38%), Query Frame = 3
Query: 3 ANEGIELLREKVDTLIVIANDKLLQIVPEDTPVQDAFLVADDILRQGVVGISEIIIKPGLINVDFADVRSVMNKAGTALMGLGKAKGKNRAAEAARAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYANVDPDANIIFGALVDADVASGELHITVLATGFE 515
AN+ I L+ KVDTLIV++NDKLLQIVPE+TP+ DAFLVADDILRQGVVGISEII+KPGLINVDFADVR+VM AGTALMG+G KGK RA +AA AAI SPLLDFP+ A+GIVFNI+G DLTL EIN AA VIY NVD DANIIFGALVD+++ S E+ ITVLATGFE
Sbjct: 170 ANDAIAELQSKVDTLIVVSNDKLLQIVPENTPLADAFLVADDILRQGVVGISEIIVKPGLINVDFADVRAVMGDAGTALMGIGTGKGKTRAQDAAVAAISSPLLDFPINKAQGIVFNIVGGNDLTLQEINAAAEVIYENVDNDANIIFGALVDSEMES-EVSITVLATGFE 339
BLAST of mRNA_Ecto-sp13_S_contig6504.17299.1 vs. uniprot
Match: Q9M7M5_9STRA (FtsZ (Fragment) n=1 Tax=Mallomonas splendens TaxID=52552 RepID=Q9M7M5_9STRA) HSP 1 Score: 234 bits (596), Expect = 3.350e-68 Identity = 120/170 (70.59%), Postives = 146/170 (85.88%), Query Frame = 3
Query: 3 ANEGIELLREKVDTLIVIANDKLLQIVPEDTPVQDAFLVADDILRQGVVGISEIIIKPGLINVDFADVRSVMNKAGTALMGLGKAKGKNRAAEAARAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYANVDPDANIIFGALVDADVASGELHITVLATGF 512
A I +++KVDTLIV++NDKLL+IVP++TP+ +AFLVADDILRQGVVGI+EII+KPGL+NVDFADVR++M AGTALMG+G KGKNRA +AA +AI SPLLDFP+T AKGIVFNI+G +D++L EIN AA VIY NVD DANIIFGA+VD + SGE+ ITVLATGF
Sbjct: 111 ARNAILEMKDKVDTLIVVSNDKLLKIVPDNTPLTEAFLVADDILRQGVVGITEIIVKPGLVNVDFADVRTIMGNAGTALMGIGHGKGKNRAKDAALSAISSPLLDFPITRAKGIVFNIVGGSDMSLQEINAAAEVIYENVDQDANIIFGAMVDDKMTSGEVSITVLATGF 280
BLAST of mRNA_Ecto-sp13_S_contig6504.17299.1 vs. uniprot
Match: A0A7S2CTQ1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CTQ1_9STRA) HSP 1 Score: 236 bits (602), Expect = 4.530e-68 Identity = 130/173 (75.14%), Postives = 144/173 (83.24%), Query Frame = 3
Query: 3 ANEGIELLREKVDTLIVIANDKLLQIVPEDTPVQDAFLVADDILRQGVVGISEIIIKPGLINVDFADVRSVMNKAGTALMGLGKAKGKNRAAEAARAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYANVDPDANIIFGALVDADVASGELHITVLATGFEDG 521
AN+ I L+ KVDTLIV++NDKLLQIVPE+TP+ DAFLVADDILRQGVVGISEII+KPGLINVDFADVR+VM AGTALMG+G KGK RA +AA AAI SPLLDFP+ AKGIVFNI+G DLTL EIN AA VIY NVD DANIIFGALVD + S E+ ITVLATGF G
Sbjct: 228 ANDAIAELQSKVDTLIVVSNDKLLQIVPENTPLADAFLVADDILRQGVVGISEIIVKPGLINVDFADVRTVMGNAGTALMGIGTGKGKTRAQDAAVAAISSPLLDFPIAKAKGIVFNIVGGDDLTLTEINAAAEVIYENVDQDANIIFGALVDKKMNS-EISITVLATGFSLG 399
BLAST of mRNA_Ecto-sp13_S_contig6504.17299.1 vs. uniprot
Match: A0A6U4ITN0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4ITN0_9STRA) HSP 1 Score: 226 bits (576), Expect = 6.920e-67 Identity = 118/167 (70.66%), Postives = 141/167 (84.43%), Query Frame = 3
Query: 12 GIELLREKVDTLIVIANDKLLQIVPEDTPVQDAFLVADDILRQGVVGISEIIIKPGLINVDFADVRSVMNKAGTALMGLGKAKGKNRAAEAARAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYANVDPDANIIFGALVDADVASGELHITVLATGF 512
I L + VDTLIV++NDKLLQI+P +TP++ AF+VADDILRQGVVGIS+III+PG+INVDFADVRS+M AGTALMG+G GK+RAA+AA +AI SPLLDFP+ AKGIVFNI+G ADLTL+EIN AA VIY VD +ANIIFGAL+D + SGE+ ITVLATGF
Sbjct: 13 AISELEKAVDTLIVVSNDKLLQIIPSNTPLEQAFVVADDILRQGVVGISDIIIRPGIINVDFADVRSIMQNAGTALMGIGSGSGKSRAADAALSAIASPLLDFPIEAAKGIVFNIVGGADLTLSEINAAAEVIYEAVDQNANIIFGALIDDAIESGEVQITVLATGF 179
BLAST of mRNA_Ecto-sp13_S_contig6504.17299.1 vs. uniprot
Match: A0A835ZC52_9STRA (Filamentous temperature sensitive Z n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC52_9STRA) HSP 1 Score: 227 bits (579), Expect = 3.230e-66 Identity = 130/202 (64.36%), Postives = 151/202 (74.75%), Query Frame = 3
Query: 3 ANEGIELLREKVDTLIVIANDKLLQIVPEDTPVQDAFLVADDILRQGVVGISEIIIKPGLINVDFADVRSVMNKAGTALMGLGKAKGKNRAAEAARAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYANVDPDANIIFGALVDADVASGELHITVLATGFEDGNTRRGVRSSAAGAAGAADRLFVHRSLPRW 608
A+ I LR VDTLI++ANDKLL+I+P +TP++ AF VADDILRQGVVGISEII++PGLINVDFADVRSVM+ AGTALMG+G+ +GKNRA +AA AAI SPLL+ P+ AKGIVFNI+G D+TL EIN AA VIY NVDP ANIIFGALVD D GEL ITVLATGF+ T VR+ G LPRW
Sbjct: 135 ASLAISELRNAVDTLIIVANDKLLEIIPPNTPLERAFGVADDILRQGVVGISEIIVRPGLINVDFADVRSVMSNAGTALMGIGRGEGKNRAEDAAAAAISSPLLEAPIDKAKGIVFNIVGGRDMTLQEINAAAEVIYENVDPSANIIFGALVD-DRMQGELSITVLATGFQ---TEEEVRAGEQGRC----------QLPRW 322
BLAST of mRNA_Ecto-sp13_S_contig6504.17299.1 vs. uniprot
Match: A0A7S3XXZ4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXZ4_HETAK) HSP 1 Score: 230 bits (586), Expect = 4.410e-66 Identity = 125/188 (66.49%), Postives = 150/188 (79.79%), Query Frame = 3
Query: 3 ANEGIELLREKVDTLIVIANDKLLQIVPEDTPVQDAFLVADDILRQGVVGISEIIIKPGLINVDFADVRSVMNKAGTALMGLGKAKGKNRAAEAARAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYANVDPDANIIFGALVDADVASGELHITVLATGFEDGNTRRGVRSSAAGAAG 566
A E I L+ VDT+IV+AND+LL+IVPE TPVQ+AFLVADDILRQGV+GISEII+K GL+NVDFADV+SVM AG+ +MG+G KGK+RA +AA AAI SPLL+ P+T AKG+VFN++GD DLTLAEIN+AA VIY +VDP+ANIIFGAL+D + G L ITVLATG E G R AA AAG
Sbjct: 236 ATEAIRRLQAAVDTMIVVANDRLLEIVPEGTPVQEAFLVADDILRQGVIGISEIILKSGLVNVDFADVKSVMENAGSGIMGIGTGKGKDRARDAAVAAISSPLLEAPLTKAKGVVFNVVGDKDLTLAEINQAAEVIYQSVDPEANIIFGALIDETLPLGTLTITVLATGVEVGAAAP-ARPPAAAAAG 422
BLAST of mRNA_Ecto-sp13_S_contig6504.17299.1 vs. uniprot
Match: Q15GC2_RHDSA (Cell division protein FtsZ (Fragment) n=1 Tax=Rhodomonas salina TaxID=52970 RepID=Q15GC2_RHDSA) HSP 1 Score: 221 bits (564), Expect = 1.620e-65 Identity = 123/175 (70.29%), Postives = 144/175 (82.29%), Query Frame = 3
Query: 9 EGIELLREKVDTLIVIANDKLLQIVPEDTPVQDAFLVADDILRQGVVGISEIIIKPGLINVDFADVRSVMNKAGTALMGLGKAKGKNRAAEAARAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYANVDPDANIIFGALVDADVASGELHITVLATGF-EDGNTR 530
+ I LR++VDTLIV++NDKLLQIVP++TP+QDAF VADDILRQGVVGISEII++PGLINVDFADVRSVM AG+ALMG+G GK RA +AA AAI SPLLDFP+ AKGIVFNI G D+TL EIN AA VIY VDP+ANIIFGALVD D E+ ITV+ATGF + G+T+
Sbjct: 1 DAIANLRDRVDTLIVVSNDKLLQIVPDNTPLQDAFSVADDILRQGVVGISEIIVRPGLINVDFADVRSVMADAGSALMGIGTGSGKTRAQDAAVAAISSPLLDFPIERAKGIVFNITGGHDMTLHEINSAAEVIYEAVDPNANIIFGALVD-DNMENEISITVVATGFTQPGDTQ 174
BLAST of mRNA_Ecto-sp13_S_contig6504.17299.1 vs. uniprot
Match: A0A6T5M1M2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5M1M2_HETAK) HSP 1 Score: 228 bits (582), Expect = 5.160e-65 Identity = 118/175 (67.43%), Postives = 146/175 (83.43%), Query Frame = 3
Query: 12 GIELLREKVDTLIVIANDKLLQIVPEDTPVQDAFLVADDILRQGVVGISEIIIKPGLINVDFADVRSVMNKAGTALMGLGKAKGKNRAAEAARAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYANVDPDANIIFGALVDADVASGELHITVLATGFEDGNTRRG 536
I+ L+E VDTLIV++NDKLLQI+PE+TP++ AF VADDILRQGVVGIS+II++PGLINVDFADVRSVM AGTALMG+G+ +GK+RA +AA AAI SPLLDFP+ +A+GIVFN++G AD+TL EIN AA VIY NVDP ANIIFGAL+D ++ + ITVLA GF + + RG
Sbjct: 207 SIQNLKEVVDTLIVVSNDKLLQIIPENTPLEQAFSVADDILRQGVVGISDIIVRPGLINVDFADVRSVMAGAGTALMGIGRGEGKHRAEDAAAAAINSPLLDFPINEAQGIVFNVVGGADMTLQEINAAAEVIYENVDPSANIIFGALIDENMQDSGISITVLACGFNNPDEPRG 381 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6504.17299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6504.17299.1 >prot_Ecto-sp13_S_contig6504.17299.1 ID=prot_Ecto-sp13_S_contig6504.17299.1|Name=mRNA_Ecto-sp13_S_contig6504.17299.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=219bp MNKAGTALMGLGKAKGKNRAAEAARAAIESPLLDFPVTDAKGIVFNIIGDback to top mRNA from alignment at Ecto-sp13_S_contig6504:712..6775- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6504.17299.1 ID=mRNA_Ecto-sp13_S_contig6504.17299.1|Name=mRNA_Ecto-sp13_S_contig6504.17299.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6064bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6504:712..6775- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6504:712..6775- >mRNA_Ecto-sp13_S_contig6504.17299.1 ID=mRNA_Ecto-sp13_S_contig6504.17299.1|Name=mRNA_Ecto-sp13_S_contig6504.17299.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=657bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6504:712..6775- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |