mRNA_Ecto-sp13_S_contig1202.1729.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1202.1729.1 vs. uniprot
Match: D7FWN8_ECTSI (Haloacid dehalogenase-like hydrolase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWN8_ECTSI) HSP 1 Score: 559 bits (1441), Expect = 5.700e-196 Identity = 286/301 (95.02%), Postives = 293/301 (97.34%), Query Frame = 1
Query: 1 MLGLALAGVLAIICGRADGFASPIKISRRWPSSTSRLPAVESS-TAGRQTEDLPQALIFDCDGVLADTERDGHRPAFNSAFKIKNLDCEWSVELYGKLLSVGGGKERMTAHWDEVGWPDCAKTDDERSLLVKELHLLKTALFNQAVVDGEIPLRTGVIRLIDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKETMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTGDEDFSAADQVTEELGEDGEASSSVTLATLGAILRERASAASS 900
MLGLALAGVLAIICG+ADGFASPIK+S RW STS L AVESS TAG QTEDLPQALIFDCDGVLADTERDGHRPAFNSAFKIKNLDCEWSVELYGKLLSVGGGKERMTAHWDEVGWPDCAKT DERS+LVKELHLLKTALFNQAVVDGEIPLRTGVIRL+DEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLER+QIFAGDIVEKKKPNPDIYDLAK+TMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTGDEDFSAADQVTEELGEDGEAS+SVTLATLGAILRERASAASS
Sbjct: 1 MLGLALAGVLAIICGKADGFASPIKMSHRWSGSTSPLEAVESSSTAGGQTEDLPQALIFDCDGVLADTERDGHRPAFNSAFKIKNLDCEWSVELYGKLLSVGGGKERMTAHWDEVGWPDCAKTADERSVLVKELHLLKTALFNQAVVDGEIPLRTGVIRLVDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERMQIFAGDIVEKKKPNPDIYDLAKDTMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTGDEDFSAADQVTEELGEDGEASTSVTLATLGAILRERASAASS 301
BLAST of mRNA_Ecto-sp13_S_contig1202.1729.1 vs. uniprot
Match: A0A835Z3K7_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3K7_9STRA) HSP 1 Score: 331 bits (849), Expect = 7.440e-107 Identity = 177/287 (61.67%), Postives = 208/287 (72.47%), Query Frame = 1
Query: 13 ALAGVLAIICGRADGFASPIKISRRWPSSTSRLPAVESSTAGRQTEDLPQALIFDCDGVLADTERDGHRPAFNSAFKIKNLDCEWSVELYGKLLSVGGGKERMTAHWDEVGWPDCAKTDDERSLLVKELHLLKTALFNQAVVDGEIPLRTGVIRLIDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKETMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTGDEDFSAADQVTEELGEDGEASSSVTLATLGAIL 873
ALA VLA+I G +S PS+T LPQALIFDCDGVLADTERDGHRPAFN AFK K +DC W V+LYGKLL VGGGKERMTAHWD+VGWP ++ LV+ELHLLKT LFN+A+V G+IPLR GV+RL+DEAI ++VPLAVCSTSN++AV+NLV TLMG+ER ER +IFAGD+V KKP PDIY+LA E + L P RV+V+EDS IGL AAK AGM CLVTKSSYTG E+FS AD+V E L +DG+ V L LG I+
Sbjct: 8 ALAAVLAVIAG----------VSAFVPSATR----------------LPQALIFDCDGVLADTERDGHRPAFNEAFKAKGIDCVWDVDLYGKLLEVGGGKERMTAHWDKVGWPLGITEKADKQALVQELHLLKTDLFNEAIVAGKIPLRPGVLRLVDEAIEQEVPLAVCSTSNERAVSNLVLTLMGRERYERFRIFAGDVVRAKKPQPDIYNLAAEALRLSPERVIVVEDSGIGLRAAKGAGMPCLVTKSSYTGGENFSLADEVVESL-DDGD----VDLQVLGNIV 263
BLAST of mRNA_Ecto-sp13_S_contig1202.1729.1 vs. uniprot
Match: A0A7S2FPW0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FPW0_9STRA) HSP 1 Score: 331 bits (849), Expect = 1.120e-106 Identity = 161/221 (72.85%), Postives = 186/221 (84.16%), Query Frame = 1
Query: 163 ALIFDCDGVLADTERDGHRPAFNSAFKIKNLDCEWSVELYGKLLSVGGGKERMTAHWDEVGWPDCAKTDDERSLLVKELHLLKTALFNQAVVDGEIPLRTGVIRLIDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKETMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTGDEDFSAADQVTEELGED 825
A++FDCDGVLADTERDGHR AFN+AFK NLD EWSVELYG+LLSVGGGKERMTAHW++VGWP ++D+ R LVK LHL KT LFN+ + +G IPLR GV+R++DEAI VPL VCSTSNDKAVTNLV TLMG ER +IQIFAGD+VEKKKP+PD+Y LAKETMGLD +VIEDSHIGL AAK AGMNCLVTKSSYT +EDFS AD++ EELG++
Sbjct: 53 AILFDCDGVLADTERDGHRVAFNTAFKENNLDTEWSVELYGELLSVGGGKERMTAHWNKVGWPAEYESDESRRELVKSLHLRKTDLFNEMICEGIIPLRPGVLRVVDEAISAGVPLGVCSTSNDKAVTNLVLTLMGPERRSKIQIFAGDVVEKKKPSPDVYLLAKETMGLDAGSTMVIEDSHIGLQAAKGAGMNCLVTKSSYTANEDFSVADKIVEELGDE 273
BLAST of mRNA_Ecto-sp13_S_contig1202.1729.1 vs. uniprot
Match: W7UBX2_9STRA (Protein cbby n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBX2_9STRA) HSP 1 Score: 318 bits (816), Expect = 1.110e-101 Identity = 159/236 (67.37%), Postives = 184/236 (77.97%), Query Frame = 1
Query: 163 ALIFDCDGVLADTERDGHRPAFNSAFKIKNLDCEWSVELYGKLLSVGGGKERMTAHWDEVGWPDCAKTDDERSLLVKELHLLKTALFNQAVVDGEIPLRTGVIRLIDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKETMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTGDEDFSAADQVTEELGEDGEASSSVTLATLGAI 870
AL+FDCDGVLADTERDGHRP FN AFK K +DC W V LYG LL VGGGKERMTAHW++VGWP +D +R LV+ELH+LKT LF + +G++PLR GV+R++D AI VPL VCSTSNDKAV L++ LMG+ER+ QIFAGD+V KKKP PDIY LAKE MGLD R VVIEDSHIGLTAAKAAGM CLVTKSSYT +EDF AAD+V EELG+D EA V+ L A+
Sbjct: 53 ALLFDCDGVLADTERDGHRPCFNLAFKEKGIDCTWDVVLYGNLLEVGGGKERMTAHWNKVGWPSGYDSDAKRQDLVRELHMLKTNLFMNYIEEGKLPLRPGVLRVVDAAIAAGVPLGVCSTSNDKAVRTLIRVLMGEERMSHFQIFAGDVVPKKKPWPDIYLLAKEQMGLDARRTVVIEDSHIGLTAAKAAGMKCLVTKSSYTANEDFRAADRVVEELGKD-EAGGGVSFKDLEAL 287
BLAST of mRNA_Ecto-sp13_S_contig1202.1729.1 vs. uniprot
Match: A0A7S2V8N0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8N0_9STRA) HSP 1 Score: 309 bits (791), Expect = 5.970e-98 Identity = 162/288 (56.25%), Postives = 206/288 (71.53%), Query Frame = 1
Query: 16 LAGVLAIICGRADGFASPIKISRRWPSSTSRLPAVESSTAGRQTEDLPQALIFDCDGVLADTERDGHRPAFNSAFKIKNLDCEWSVELYGKLLSVGGGKERMTAHWDEVGWPDCAKTDDERS--LLVKELHLLKTALFNQAVVDGEIPLRTGVIRLIDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKETMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTGDEDFSAADQVTEELGEDGEASSSVTLATLGAIL 873
L+ VL IC ++ F + ++ +P L A+++ + +P+A++FDCDGVLADTERDGHRPAFN+ F+ + LD +W+ ELYG+LL VGGGKERMTAHW+EVGWP D+ S LVKELHL KT FN+ + G IPLR GV+RL+DEAI V LAVCSTSN+KAV NLV TLMG+ER + Q F GD+V+KKKP PD+Y +AK++MGLD ++ ++IEDS IGL AAKA+GM CLVTKSSYT +EDFS AD V L +DG +VTL LG IL
Sbjct: 7 LSTVLLTICTQSAAFVA----TKTFPHGLKPLHAIDNKKVLQMA--VPEAILFDCDGVLADTERDGHRPAFNAVFEERRLDTDWTPELYGRLLEVGGGKERMTAHWNEVGWPSSVSLHDDESKATLVKELHLAKTDEFNKMIKSGAIPLREGVLRLVDEAISNNVSLAVCSTSNEKAVKNLVLTLMGEERYSKFQFFCGDMVKKKKPAPDVYLMAKDSMGLDASKTIIIEDSGIGLQAAKASGMKCLVTKSSYTENEDFSKADCVVSSL-DDG----NVTLEKLGNIL 283
BLAST of mRNA_Ecto-sp13_S_contig1202.1729.1 vs. uniprot
Match: A0A7S1ZBJ4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZBJ4_TRICV) HSP 1 Score: 303 bits (776), Expect = 8.590e-96 Identity = 149/240 (62.08%), Postives = 183/240 (76.25%), Query Frame = 1
Query: 157 PQALIFDCDGVLADTERDGHRPAFNSAFKIKNLDCEWSVELYGKLLSVGGGKERMTAHWDEVGWPDCAKTDDE-RSLLVKELHLLKTALFNQAVVDGEIPLRTGVIRLIDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKETMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTGDEDFSAADQVTEELGEDGEASSSVTLATLGAIL 873
P+A++FDCDGVLADTERDGHRPAFN AF +D EW VE YG LL VGGGKERMTAHW+EVGWP D+E R VKELHL KT +F + +G IPLR GV+RL+DEAI V LA CSTSNDKAV NL+ TLMG +R + Q+FAGD+V+ KKP PD+Y++A E MGLD ++ V++ED+ IGL AAKAAG+ CLVTKS+Y EDF+ AD + +ELG+D E + VTLATLG++L
Sbjct: 45 PEAILFDCDGVLADTERDGHRPAFNRAFAENQIDEEWGVERYGVLLEVGGGKERMTAHWNEVGWPSAMPDDEEGRQAKVKELHLQKTGIFMDMINEGAIPLRPGVLRLVDEAIENGVRLACCSTSNDKAVKNLIATLMGPDRAAKFQVFAGDMVKAKKPAPDVYNMAVEEMGLDKSKCVIVEDTDIGLGAAKAAGIKCLVTKSAYAEKEDFTGADLIVDELGDDPE--TGVTLATLGSLL 282
BLAST of mRNA_Ecto-sp13_S_contig1202.1729.1 vs. uniprot
Match: A0A7S0GHW2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GHW2_9STRA) HSP 1 Score: 301 bits (770), Expect = 1.320e-94 Identity = 154/267 (57.68%), Postives = 190/267 (71.16%), Query Frame = 1
Query: 79 SRRWPSSTSRLPAVESSTAGRQTEDLP--QALIFDCDGVLADTERDGHRPAFNSAFKIKNLDCEWSVELYGKLLSVGGGKERMTAHWDEVGWPDCAKTDDERSLLVKELHLLKTALFNQAVVDGEIPLRTGVIRLIDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKETMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTGDEDFSAADQVTEELGEDGEASSSVTLATLGAIL 873
SRR + SR A +T D P QA++FDCDGVLADTERDGHR AFN F L+ EW ELYGKLL GGGKERMTAHW+EVGWP D+ R VKE HL KT +F + + G+IPLR GV+R++DEAI V LA CSTSN+KAV+NL++TLMG+ER + QIFAGD+V++KKP PD+Y++A + MGLD R V++ED++IGL AA AA + C VTKSSYTGDEDF+ AD V EELG+D E VTL L ++L
Sbjct: 39 SRRAQKNASREKWAAERGASSETSDKPSLQAILFDCDGVLADTERDGHRLAFNQIFSEDELNTEWDAELYGKLLETGGGKERMTAHWNEVGWPTQIPDDENRQSKVKEYHLRKTDVFMELIDAGKIPLRAGVLRIVDEAIANDVQLACCSTSNEKAVSNLIQTLMGEERFAKFQIFAGDMVKQKKPAPDVYNMAVDAMGLDKERCVIVEDTNIGLRAAMAAEIACCVTKSSYTGDEDFTGADLVVEELGDDREGV--VTLENLSSLL 303
BLAST of mRNA_Ecto-sp13_S_contig1202.1729.1 vs. uniprot
Match: B5YPA5_THAPS (Possibly a phosphatase from the CbbY protein family n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YPA5_THAPS) HSP 1 Score: 299 bits (766), Expect = 1.990e-94 Identity = 154/249 (61.85%), Postives = 194/249 (77.91%), Query Frame = 1
Query: 127 STAGRQTEDLPQALIFDCDGVLADTERDGHRPAFNSAFKIKNLDCEWSVELYGKLLSVGGGKERMTAHWDEVGWPDCAKTDDERSLLVKELHLLKTALFNQAVVDGEIPLRTGVIRLIDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKETMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTGDEDFSAADQVTEELGEDGEASSSVTLATLGAIL 873
ST+ R T +L +A++FDCDGVLADTERDGHR AFN AF++ ++D WS + YGKLL VGGGKERMTAHW+EVGWPD A +D R+ V LHL KT +F + +G IPLR GV+RL+DEAI V LAVCSTSN+KAV+NLV TLMG ER + QIFAGD+V+KKKP PD+Y +A +TMGLD + V+IEDSHIG+ AA A+G++CLVTKSSYT EDF+ A ++ EELG+D A++ VTL TL ++L
Sbjct: 29 STSLRATSNL-EAILFDCDGVLADTERDGHRLAFNRAFQLNSIDESWSEQRYGKLLEVGGGKERMTAHWNEVGWPD-AIPEDGRAEKVLGLHLQKTDIFMDLIDEGAIPLRPGVLRLVDEAIENGVRLAVCSTSNEKAVSNLVSTLMGAERASKFQIFAGDMVKKKKPAPDVYLMAVDTMGLDKSGCVIIEDSHIGVGAAVASGISCLVTKSSYTAGEDFTGAKKIVEELGDD--AATGVTLDTLASLL 273
BLAST of mRNA_Ecto-sp13_S_contig1202.1729.1 vs. uniprot
Match: A0A6V2Q9B2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2Q9B2_9STRA) HSP 1 Score: 297 bits (761), Expect = 1.360e-93 Identity = 156/284 (54.93%), Postives = 194/284 (68.31%), Query Frame = 1
Query: 25 VLAIICGRADGFASPIKISRRWPSSTSRLPAVESSTAGRQTEDLPQALIFDCDGVLADTERDGHRPAFNSAFKIKNLDCEWSVELYGKLLSVGGGKERMTAHWDEVGWPDCA-KTDDERSLLVKELHLLKTALFNQAVVDGEIPLRTGVIRLIDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKETMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTGDEDFSAADQVTEELGEDGEASSSVTLATLGAIL 873
+LA+ A F P R +++T +A++FDCDGVLADTERDGHR AFN AF +D WS E YG LL VGGGKERMTAHW+EVGWP ++ DER+ VK+LHL KT +F + +G IPLR GV+RL+DEAI V LAVCSTSNDKAV+NLV TLMG ER + QIFAGD+V+ KKP PD+Y++A + M LD +R V++ED+HIGL+AAKAAG+ C VTKSSYTG EDF+ AD + EELG+D E VT TL ++L
Sbjct: 9 LLAMTVSTASAFTHPTSFVRS-----------KAATTSSSLNAALEAILFDCDGVLADTERDGHRIAFNRAFANNGIDENWSEERYGVLLEVGGGKERMTAHWNEVGWPSVMPESPDERAAQVKKLHLEKTDIFMDLIDEGVIPLRPGVLRLVDEAIEAGVRLAVCSTSNDKAVSNLVSTLMGPERAAKFQIFAGDMVKAKKPAPDVYNMAVDEMKLDKSRCVIVEDTHIGLSAAKAAGIKCCVTKSSYTGGEDFTGADLIVEELGDDKEGG--VTAETLASLL 279
BLAST of mRNA_Ecto-sp13_S_contig1202.1729.1 vs. uniprot
Match: A0A7R9WSC9_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WSC9_9STRA) HSP 1 Score: 297 bits (760), Expect = 6.970e-93 Identity = 145/238 (60.92%), Postives = 185/238 (77.73%), Query Frame = 1
Query: 160 QALIFDCDGVLADTERDGHRPAFNSAFKIKNLDCEWSVELYGKLLSVGGGKERMTAHWDEVGWPDCAKTDDERSLLVKELHLLKTALFNQAVVDGEIPLRTGVIRLIDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERIQIFAGDIVEKKKPNPDIYDLAKETMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTGDEDFSAADQVTEELGEDGEASSSVTLATLGAIL 873
+A+++D DGVLADTERD HRPAFN AF+ NL+ +W VE YGKLL VGGGKERMTAHW+EVGWP D+R VKELHL KT +F + G +PLR GV+R+ID+AI + LAVCSTSN+KAV NLV+TLMG +R + QIFAGD+V+KKKP PD+Y+LA +TMGLD ++ V++EDSHIGL AA AAG+ C+VTKSSYT EDF+ A+++ EELG+D A++ VTL L ++L
Sbjct: 83 EAILWDMDGVLADTERDAHRPAFNIAFEENNLNTDWDVERYGKLLEVGGGKERMTAHWNEVGWPQGFPEGDDRPAKVKELHLRKTDIFMDMIKTGGVPLRPGVLRIIDDAIAADLRLAVCSTSNEKAVRNLVQTLMGPDRAAKFQIFAGDMVQKKKPAPDVYNLAVDTMGLDKSKCVIVEDSHIGLGAAMAAGIACIVTKSSYTAGEDFTGANKIVEELGDD--AATGVTLENLESLL 318 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1202.1729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1202.1729.1 >prot_Ecto-sp13_S_contig1202.1729.1 ID=prot_Ecto-sp13_S_contig1202.1729.1|Name=mRNA_Ecto-sp13_S_contig1202.1729.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=301bp MLGLALAGVLAIICGRADGFASPIKISRRWPSSTSRLPAVESSTAGRQTEback to top mRNA from alignment at Ecto-sp13_S_contig1202:11269..16353+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1202.1729.1 ID=mRNA_Ecto-sp13_S_contig1202.1729.1|Name=mRNA_Ecto-sp13_S_contig1202.1729.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5085bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1202:11269..16353+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1202:11269..16353+ >mRNA_Ecto-sp13_S_contig1202.1729.1 ID=mRNA_Ecto-sp13_S_contig1202.1729.1|Name=mRNA_Ecto-sp13_S_contig1202.1729.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=903bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1202:11269..16353+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |