mRNA_Ecto-sp13_S_contig6494.17280.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6494.17280.1 vs. uniprot
Match: A0A6H5KEA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEA4_9PHAE) HSP 1 Score: 159 bits (402), Expect = 2.150e-40 Identity = 110/151 (72.85%), Postives = 118/151 (78.15%), Query Frame = 3
Query: 732 MLESATSFPPALAGGPETNESLRAWKTRLQSRLAEQKRXXXXXXXXXXXXXXXXXEHARLERGGTNAAPDGRSSSSGN-RDAEHVFRVQVASFAELDSLTRENHETLEEVKRLIRKPANSCPRGTESTDTDKLRELDRLVAMAKALDEMAS 1181
MLESATSFPPALAGGP NESLRAW TRLQSRLA+QKRXXXXXXXXXXXX EHARLERGGTN APD RSSSS FR + +F S+ + +EVKRLIRKPANSCPRGTESTDTDKLRELDRLVAMAKALDE+A+
Sbjct: 1 MLESATSFPPALAGGPRGNESLRAWTTRLQSRLADQKRXXXXXXXXXXXX-----EHARLERGGTNVAPDERSSSSRPVLRRPFYFRFRYTNFI---SILISSCFLCKEVKRLIRKPANSCPRGTESTDTDKLRELDRLVAMAKALDEVAA 143
BLAST of mRNA_Ecto-sp13_S_contig6494.17280.1 vs. uniprot
Match: D7FUA2_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA2_ECTSI) HSP 1 Score: 128 bits (322), Expect = 4.230e-28 Identity = 81/193 (41.97%), Postives = 116/193 (60.10%), Query Frame = 3
Query: 771 GGPETNESLRAWKTRL--QSRLAEQKRXXXXXXXXXXXXXXXXXEHARLERGGTNAAPDGRSSSSGNRDAEHVFRVQVASFAELDSLTRENHETLEEVKRLIRK-PANSCPRGTESTDTDKLRELDRLVAMAKALDEMASRHLEHKSIQQKELTLPPGSKAYFTLVRTGLCNAYLAASVVDSSLVRTSKSGGM 1340
GGP ESL +W+ RL Q + A ++ + + +R A + S SS D +H+ + Q++SF+ L +L +H+ LE+V++L+ N GT ++T L EL+RLVAMA+ L +M SRH+ ++ IQ++EL LPPG KAY+T +RTGLCNAYLAASVV SSLV TSK+G M
Sbjct: 341 GGPTRGESLDSWRARLRQQEQAAVREDTKAENPAARTSSSTQGDKPGKTDR----ATTEPISGSSREADMDHMTQAQISSFSALSTLCGGSHKRLEQVRQLVEALDINRFSPGTGLSETGTLGELNRLVAMAEDLGDMVSRHVMNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVCSSLVCTSKTGRM 529
BLAST of mRNA_Ecto-sp13_S_contig6494.17280.1 vs. uniprot
Match: D7FH89_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH89_ECTSI) HSP 1 Score: 126 bits (317), Expect = 2.030e-27 Identity = 74/149 (49.66%), Postives = 100/149 (67.11%), Query Frame = 3
Query: 900 HARLERGGTNAAPDGRSSSSGNR-DAEHVFRVQVASFAELDSLTRENHETLEEVKRLIRKPA-NSCPRGTESTDTDKLRELDRLVAMAKALDEMASRHLEHKSIQQKELTLPPGSKAYFTLVRTGLCNAYLAASVVDSSLVRTSKSGGM 1340
H + GG +P+ S S G + + +FRVQ++S A LDSL +EN E LE+++R+I+ PA E +D ++ R+L L+ MAKAL E+A H E K +Q+KEL L P SKAY+T VR+GLCNAYLAASV+DS V TSK+GGM
Sbjct: 448 HRQAAVGGRVRSPENASLSPGKAAEVDRLFRVQLSSSAGLDSLIKENPEALEDIQRVIKAPAAGGFYFDDELSDMERRRKLGALMNMAKALGEVALSHTEDKDVQRKELALAPFSKAYYTAVRSGLCNAYLAASVIDSDWVSTSKTGGM 596
BLAST of mRNA_Ecto-sp13_S_contig6494.17280.1 vs. uniprot
Match: D7FUA1_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA1_ECTSI) HSP 1 Score: 125 bits (313), Expect = 6.130e-27 Identity = 81/196 (41.33%), Postives = 114/196 (58.16%), Query Frame = 3
Query: 771 GGPETNESLRAWKTRLQSRLAEQKRXXXXXXXXXXXXXXXXXEHARLERGGTNAAPDGR-----SSSSGNRDAEHVFRVQVASFAELDSLTRENHETLEEVKRLIRKPA-NSCPRGTESTDTDKLRELDRLVAMAKALDEMASRHLEHKSIQQKELTLPPGSKAYFTLVRTGLCNAYLAASVVDSSLVRTSKSGGM 1340
GGP +ESL +W+ RL+ +Q++ + ++ G PDG S SS D +H+ + Q++SF+ L +L + +LE+V +L+ N GT T L EL+RLVAMA+ L +M SRH+ ++ IQ++EL LPPG KAY+T +RTGLCNAYLAASVV SSLV TSK+G M
Sbjct: 368 GGPAKDESLDSWRARLR----QQEQAAVREDTKAENPAVRTSSSTQGDKPGK---PDGATTEPISGSSREADMDHITQAQISSFSSLSTLCGGSQASLEQVGQLVEALGINRSSPGTGLNGTGTLGELNRLVAMAEDLGDMVSRHVTNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVSSSLVCTSKTGRM 556
BLAST of mRNA_Ecto-sp13_S_contig6494.17280.1 vs. uniprot
Match: D7FHA2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA2_ECTSI) HSP 1 Score: 122 bits (306), Expect = 3.800e-26 Identity = 78/195 (40.00%), Postives = 108/195 (55.38%), Query Frame = 3
Query: 765 LAGGPETNESLRAWKTRLQSRLAEQKRXXXXXXXXXXXXXXXXXEHARLERGGTNAAPDGRSSSSGNR--DAEHVFRVQVASFAELDSLTRENHETLEEVKRLIRKP-ANSCPRGTESTDTDKLRELDRLVAMAKALDEMASRHLEHKSIQQKELTLPPGSKAYFTLVRTGLCNAYLAASVVDSSLVRTSKSGGM 1340
L GGP E L +W+ RL + + + + R E G +S S + +A+ VF+ Q++S A LDSL REN LE+++R+I A S E +D R+L LV M+ AL E+ +H E ++++ELTLPP SKAY+T VRTG+CNAYLAASV+DS V TSK+GGM
Sbjct: 247 LTGGPAYGEGLDSWRERLAPKHKTKLQIFRGDRMEKDAPVPPGSRNGRHEAVGERVRSPEHASLSPEKAEEADRVFKAQLSSSAGLDSLIRENPGALEDIQRVIEASVAGSVSVDNELSDMQSRRKLGTLVTMSTALGEVVLKHTEDMDVKREELTLPPFSKAYYTAVRTGICNAYLAASVIDSDWVSTSKTGGM 441
BLAST of mRNA_Ecto-sp13_S_contig6494.17280.1 vs. uniprot
Match: D7FUA0_ECTSI (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA0_ECTSI) HSP 1 Score: 122 bits (306), Expect = 5.280e-26 Identity = 79/192 (41.15%), Postives = 114/192 (59.38%), Query Frame = 3
Query: 774 GPETNESLRAWKTRL--QSRLAEQKRXXXXXXXXXXXXXXXXXEHARLERGGTNAAPDGRSSSSGNRDAEHVFRVQVASFAELDSLTRENHETLEEVKRLIRKPA-NSCPRGTESTDTDKLRELDRLVAMAKALDEMASRHLEHKSIQQKELTLPPGSKAYFTLVRTGLCNAYLAASVVDSSLVRTSKSGGM 1340
GP +ESL +W+ RL Q + AE++ + + +R T S SS D + + + Q++SF+ L +L H++LE+V++L+ N GT ++T L E++RLVAMA+ L M SRH+ ++ IQ++EL LPPG KAY+T +RTGLCNAYLAASVV SSLV TSK+G M
Sbjct: 554 GPAKDESLDSWRARLRQQEQAAEREDTKAENPAARTSSSTQGDKPGKPDRATTGPI----SGSSREADMDDMTQAQISSFSALSTLCGGRHKSLEQVRQLVEALGINRSSPGTGLSETGTLGEVNRLVAMAEDLGGMVSRHVMNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVCSSLVCTSKTGRM 741
BLAST of mRNA_Ecto-sp13_S_contig6494.17280.1 vs. uniprot
Match: A0A6H5KZF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF6_9PHAE) HSP 1 Score: 120 bits (300), Expect = 3.100e-25 Identity = 67/125 (53.60%), Postives = 87/125 (69.60%), Query Frame = 3
Query: 969 DAEHVFRVQVASFAELDSLTRENHETLEEVKRLIRKPA-NSCPRGTESTDTDKLRELDRLVAMAKALDEMASRHLEHKSIQQKELTLPPGSKAYFTLVRTGLCNAYLAASVVDSSLVRTSKSGGM 1340
+ + +FRVQ++S A DSL REN E LE++ R+I+ PA S E +D ++ R+L LV MAKAL E+A H E +Q+KEL L P SKAY+T VR+GLCNAYLAASV+DS V T K+GGM
Sbjct: 432 EVDRLFRVQLSSSAGFDSLIRENPEALEDIHRVIKAPAAGSLDFVDEISDMERRRKLGTLVNMAKALGEVALSHTEDMDVQRKELALTPFSKAYYTAVRSGLCNAYLAASVIDSDWVSTCKTGGM 556
BLAST of mRNA_Ecto-sp13_S_contig6494.17280.1 vs. uniprot
Match: D7FPS8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS8_ECTSI) HSP 1 Score: 111 bits (277), Expect = 2.600e-22 Identity = 77/200 (38.50%), Postives = 110/200 (55.00%), Query Frame = 3
Query: 762 ALAGGPETNESLRAWKTRLQSRLAEQKRXXXXXXXXXXXXXXXXXEHARLERGGTNAAPDGRSS-SSGNRDAEHVFRVQVASFAELDSLTRENHETLEEVKRLIRKP------ANSCPRGTESTDTDKLRELDRLVAMAKALDEMASRHLEHKSIQQKELTLPPGSKAYFTLVRTGLCNAYLAASVVDSSLVRTSKSGGM 1340
++ GGPE + L +W+ R+Q + +Q+ E T+ G S + RD H F QVASFA L +LT+ + E L+E+K+LIR P A+ E D +KLR+L+RL MA L E+AS H+E + +Q++E L KAYF VR G+CNA+LA+SVV S+LV TSK+GG+
Sbjct: 646 SITGGPEHGD-LDSWRARIQPQ--QQREAEHDDPKEEADVAQHSLRSQDAETVETDIVHPGPSCPAEEERDPGHSFGEQVASFAGLAALTKGDCEALDEIKQLIRAPPIRAPPADGVSPAPEPIDEEKLRDLNRLAEMATTLSEIASSHMEDQWMQEREQGLSQARKAYFNAVRDGVCNAFLASSVVGSNLVATSKTGGI 842
BLAST of mRNA_Ecto-sp13_S_contig6494.17280.1 vs. uniprot
Match: D7FH88_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH88_ECTSI) HSP 1 Score: 109 bits (272), Expect = 2.650e-22 Identity = 64/129 (49.61%), Postives = 85/129 (65.89%), Query Frame = 3
Query: 981 VFRVQVASFAELDSLTRENHETLEEVKRLIRK--PANSCPRGTESTDTDKLRELDRLVAMAKALDEMASRHLEHKSIQQKELTLPPGSKAYFTLVRTGLCNAYLAASVVDSSLVRTSKSGGMCMVSAEV 1361
+FRVQ++S A LDSL EN E LE+++R+I P + P E +D ++ REL L +M+ AL E+ +H E +QQKEL LP +AY+T VRTGLC AYLAASV++S V TSK+GGM V V
Sbjct: 308 LFRVQLSSSAWLDSLIGENPEALEDIQRVIESQVPGSVSP-DDERSDMERHRELGTLASMSTALGEVVLKHTEDMDVQQKELALPAFWRAYYTAVRTGLCEAYLAASVINSDWVSTSKTGGMGKVGVAV 435
BLAST of mRNA_Ecto-sp13_S_contig6494.17280.1 vs. uniprot
Match: D7FH90_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH90_ECTSI) HSP 1 Score: 107 bits (268), Expect = 3.010e-21 Identity = 65/138 (47.10%), Postives = 89/138 (64.49%), Query Frame = 3
Query: 933 APDGRSSSSGN-RDAEHVFRVQVASFAELDSLTRENHETLEEVKRLIRKP-ANSCPRGTESTDTDKLRELDRLVAMAKALDEMASRHLEHKSIQQKELTLPPGSKAYFTLVRTGLCNAYLAASVVDSSLVRTSKSGGM 1340
+P+ S S G + + +F Q++S A LDSL RE + LE+++R+I A S + +D D R+L LV M+ AL E+A RH E +IQ+KEL LP S AY++ VR+GLC AYLAASV+DS V TSK+GGM
Sbjct: 392 SPERASLSPGKAEEMDRLFSAQLSSSAGLDSLIREKPKALEDIQRVIESTVAGSVSPDDKLSDIDGRRKLGTLVTMSTALGEVALRHTEDMNIQRKELALPAFSNAYYSAVRSGLCQAYLAASVIDSDWVSTSKTGGM 529 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6494.17280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6494.17280.1 >prot_Ecto-sp13_S_contig6494.17280.1 ID=prot_Ecto-sp13_S_contig6494.17280.1|Name=mRNA_Ecto-sp13_S_contig6494.17280.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=211bp MLESATSFPPALAGGPETNESLRAWKTRLQSRLAEQKRAEQERAKQQRAEback to top mRNA from alignment at Ecto-sp13_S_contig6494:4232..6727- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6494.17280.1 ID=mRNA_Ecto-sp13_S_contig6494.17280.1|Name=mRNA_Ecto-sp13_S_contig6494.17280.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2496bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6494:4232..6727- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6494:4232..6727- >mRNA_Ecto-sp13_S_contig6494.17280.1 ID=mRNA_Ecto-sp13_S_contig6494.17280.1|Name=mRNA_Ecto-sp13_S_contig6494.17280.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=633bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6494:4232..6727- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |