prot_Ecto-sp13_S_contig64866.17272.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig64866.17272.1
Unique Nameprot_Ecto-sp13_S_contig64866.17272.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length50
Homology
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BLAST of mRNA_Ecto-sp13_S_contig64866.17272.1 vs. uniprot
Match: A0A6H5KSV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV9_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 1.780e-23
Identity = 48/50 (96.00%), Postives = 49/50 (98.00%), Query Frame = 0 
Query:    1 LIGEALIDLSPLAEGRPVVAGWTMVEDATGRSAGKICVSARWVKPLRTGG 50
            LIGEALIDLSPLAEGRPVVAGWT VEDATGRSAGK+CVSARWVKPLRTGG
Sbjct:  479 LIGEALIDLSPLAEGRPVVAGWTTVEDATGRSAGKVCVSARWVKPLRTGG 528
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BLAST of mRNA_Ecto-sp13_S_contig64866.17272.1 vs. uniprot
Match: D8LSF7_ECTSI (C2-C2_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF7_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 3.320e-23
Identity = 47/50 (94.00%), Postives = 49/50 (98.00%), Query Frame = 0 
Query:    1 LIGEALIDLSPLAEGRPVVAGWTMVEDATGRSAGKICVSARWVKPLRTGG 50
            LIGEAL+DLSP+AEGRPVVAGWT VEDATGRSAGKICVSARWVKPLRTGG
Sbjct:  947 LIGEALVDLSPMAEGRPVVAGWTTVEDATGRSAGKICVSARWVKPLRTGG 996
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig64866.17272.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KSV9_9PHAE1.780e-2396.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSF7_ECTSI3.320e-2394.00C2-C2_1 domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig64866contigEcto-sp13_S_contig64866:590..739 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig64866.17272.1mRNA_Ecto-sp13_S_contig64866.17272.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig64866 590..739 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig64866.17272.1 ID=prot_Ecto-sp13_S_contig64866.17272.1|Name=mRNA_Ecto-sp13_S_contig64866.17272.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=50bp
LIGEALIDLSPLAEGRPVVAGWTMVEDATGRSAGKICVSARWVKPLRTGG
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