mRNA_Ecto-sp13_S_contig6480.17264.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6480.17264.1
Unique NamemRNA_Ecto-sp13_S_contig6480.17264.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6480.17264.1 vs. uniprot
Match: D8LJ20_ECTSI (Mitochondrial carrier protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ20_ECTSI)

HSP 1 Score: 645 bits (1664), Expect = 2.930e-227
Identity = 344/355 (96.90%), Postives = 347/355 (97.75%), Query Frame = 1
Query:   55 MRVVYASIVTSLLLSFLSIRAVDAASGEAGLRVGLQGTWRSFGDSLRSARPHLIAAAVARCASITAGYPLDTIKTRLHLGRAAAATSIPDMYRGLGSSLAGQVPYGMLTFGTYELYKTALLERFPQLPRAITFCLAAVLGDMTGSLWLVPSEVVKVQMQGGLHATVGQAAMSIFRKSGVGGFYQGFSGQVGRDVPFRAIQLTSYELLRTLLRTWRRREQTGVATERGDDSGGVPVGRARGGAATAAAGGDGEHAALSSGDAALLGGLAGAISATFTCPLDVVRTRLMVGGGGGAAETWAAAIKAGGLFSGLGTRVFYIGTSSAVFFVVYEAIKVRLGVVAVSSPPAAISKAKRQQ 1119
            MRVVY SIV SLLLSFLSI+AVDAASGEAGLRVGLQGTWRSFGDSLRSARPHLIAAAVARCASITAGYPLDTIKTRLHLGRAAAATSIPDMYRGLGSSLAGQVPYGMLTFGTYELYKTALLERFPQLPRAITFCLAAVLGDMTGSLWLVPSEVVKVQMQGGLHATVGQAAMSIFRKSGVGGFYQGFSGQVGRDVPFRAIQLTSYELLRTLL+TWRRR+ TGVATERGDDSGGVPVGRARGG ATAAAG DGEHAALSSGDAALLGGLAGAISATFTCPLDVVRTRLMVGGGGGAAETWAAAIKAGGL SGLGTRVFYIGTSSAVFFVVYEAIKVRLGVVA SSPPAA SKAKRQQ
Sbjct:    1 MRVVYVSIVASLLLSFLSIQAVDAASGEAGLRVGLQGTWRSFGDSLRSARPHLIAAAVARCASITAGYPLDTIKTRLHLGRAAAATSIPDMYRGLGSSLAGQVPYGMLTFGTYELYKTALLERFPQLPRAITFCLAAVLGDMTGSLWLVPSEVVKVQMQGGLHATVGQAAMSIFRKSGVGGFYQGFSGQVGRDVPFRAIQLTSYELLRTLLKTWRRRQHTGVATERGDDSGGVPVGRARGGVATAAAGDDGEHAALSSGDAALLGGLAGAISATFTCPLDVVRTRLMVGGGGGAAETWAAAIKAGGLLSGLGTRVFYIGTSSAVFFVVYEAIKVRLGVVAASSPPAATSKAKRQQ 355          
BLAST of mRNA_Ecto-sp13_S_contig6480.17264.1 vs. uniprot
Match: A0A7S1BAX9_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BAX9_9STRA)

HSP 1 Score: 216 bits (550), Expect = 3.900e-60
Identity = 141/331 (42.60%), Postives = 185/331 (55.89%), Query Frame = 1
Query:  109 IRAVDAASGEAGLRVGLQGTWRSFGDSLRSARPHLIAAAVARCASITAGYPLDTIKTRLHLGRAAA-------ATSIPDMYRGLGSSLAGQVPYGMLTFGTYELYKTALLERFPQLPRAITFCLAAVLGDMTGSLWLVPSEVVKVQMQGGLHATVGQAAMSIFRKSGVGGFYQGFSGQVGRDVPFRAIQLTSYELLRTL---LRTWRRREQTGVATERGDDSGGVPVGRARGGAATAAAGGDGEHAALSSGDAALLGGLAGAISATFTCPLDVVRTRLMVGGG------GGAAETWAAAIKAGGLFSGLGTRVFYIGTSSAVFFVVYEAIK 1053
            + A  A S    L   +   +R+F   +  AR HL AAAVAR  SI   YP+DT+KTR+ +G           + +   MY+GL  SL GQVPYG+LTFG+YE+YK A L+R P  P A+ +  AA+LGD TGS WL PSEVVK Q+QGG+H++   AA  I+ + G GGFYQG+ G + RDVPFR  QLTSYE+ +++   ++T +RRE     TE        P G  +                LSS DAA+ G +AG  SA  T PLD ++T LM  G          A T        GLFSG+  RV YI  S A+FF+VYE ++
Sbjct:   73 VAAATAPSTNLRLIPSIISPFRAFVCKVADARKHLAAAAVARAVSIFVMYPVDTVKTRIQMGEPILGGVGTKFSIAAAGMYKGLDGSLVGQVPYGVLTFGSYEVYKQAFLKRLPAAPPALLYAFAAILGDTTGSFWLCPSEVVKQQIQGGMHSSTLAAARDIYSRQGFGGFYQGYFGGLARDVPFRVAQLTSYEVAKSVYLRMKTRKRRE-----TE--------PEGERK--------------VELSSIDAAICGAVAGTFSAGITAPLDRIKTLLMTDGAKYSNSVANCASTIFKNEGVTGLFSGIVPRVAYIAPSVALFFIVYERVQ 376          
BLAST of mRNA_Ecto-sp13_S_contig6480.17264.1 vs. uniprot
Match: A0A7S2SIM3_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SIM3_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.570e-59
Identity = 128/306 (41.83%), Postives = 181/306 (59.15%), Query Frame = 1
Query:  163 GTWRSFGDSLRSARPHLIAAAVARCASITAGYPLDTIKTRLHLGRAAAATSIPDMYRGLGSSLAGQVPYGMLTFGTYELYKTALLERFPQLPRAITFCLAAVLGDMTGSLWLVPSEVVKVQMQGGLHATVGQAAMSIFRKSGVGGFYQGFSGQVGRDVPFRAIQLTSYELLRTLLRTWRRREQTGVATERGDDSGGVPVGRARGGAATAAAGGDGEHAALSSGDAALLGGLAGAISATFTCPLDVVRTRLMVGGG--GGAAETWAAAI----KAGGLFSGLGTRVFYIGTSSAVFFVVYEAIKVRL 1062
            G   +F  +++ AR HL AAAVAR  SI   YP+DT+KTR+ + +   A  +  +Y G+G SL GQVPYG+LTFG+YE+YK  LLE+FP +     + ++AVLGD+TGS WL PSEVVK +MQ G+++T G+A   I +K G GGFY+G+ G + RDVPFR  QLTSYE+ + +    +R++Q     +   +S  +                  E+  LS G++A +G +AG+ SA  T PLD ++T LM      GG+  + AA I       G   GL  RV YI  S  +FF+ YE ++ RL
Sbjct:   47 GPLETFVKTIKDARRHLAAAAVARATSIFTMYPMDTMKTRIQMEQ-PNALRLKGLYSGVGGSLVGQVPYGVLTFGSYEVYKNTLLEKFPDVRPVFLYAISAVLGDVTGSGWLCPSEVVKQKMQAGMYSTTGEAIREIIKKKGFGGFYEGYFGGLARDVPFRVAQLTSYEVSKKIFLQMKRKKQQ----QNEGESSSI------------------ENLRLSPGESAAVGAMAGSFSAAITSPLDRIKTLLMTDSAAYGGSVASCAAKIWREEGIAGFCQGLVPRVIYIAPSVMIFFIAYEQVQQRL 329          
BLAST of mRNA_Ecto-sp13_S_contig6480.17264.1 vs. uniprot
Match: A0A1Z5K5K0_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K5K0_FISSO)

HSP 1 Score: 209 bits (532), Expect = 6.360e-58
Identity = 129/326 (39.57%), Postives = 181/326 (55.52%), Query Frame = 1
Query:  106 SIRAVDAASGEAGLRVGLQGTWRSFGDSLRSARPHLIAAAVARCASITAGYPLDTIKTRLHLGRAAAATSIPDMYRGLGSSLAGQVPYGMLTFGTYELYKTALLERFPQLPRAITFCLAAVLGDMTGSLWLVPSEVVKVQMQGGLHATVGQAAMSIFRKSGVGGFYQGFSGQVGRDVPFRAIQLTSYELLRTL-LRTWRRREQTGVATERGDDSGGVPVGRARGGAATAAAGGDGEHAALSSGDAALLGGLAGAISATFTCPLDVVRTRLMVGGG--GGAAETWAAAI----KAGGLFSGLGTRVFYIGTSSAVFFVVYEAIKVRL 1062
            S   +    G A         W SF   +R +R  L+AAA ARC+SI + YP+DT+KTRL + + A    +  +Y+G+  SL GQVPYG+LTFG+YE+YK ALL +FP     + +  +AVLGD+TGS WL PSEV+K Q Q G++ +  +A M I RK G+ G YQG+ G + RDVPFR  QLTSYE+ ++  LR   RR ++   + +G  +                     E   L + ++A+ G +AG+ SA  T PLD  +T LM      GG   + A+ I       G   G+  RV YI  S A+FF+VYE ++ RL
Sbjct:   43 SAATIPTRGGAAKAETAKMNPWLSFVSIIRDSRRDLLAAAAARCSSIFSMYPVDTLKTRLQMEQ-ANPFRLEGLYKGVAGSLIGQVPYGVLTFGSYEMYKKALLNKFPNTKPVLLYAFSAVLGDLTGSGWLCPSEVIKQQTQAGMYKSTAEAFMGILRKKGIKGLYQGYFGGIARDVPFRVAQLTSYEVTKSFYLRIKSRRAKSASKSVKGKSTN--------------------EKIQLDAAESAICGAIAGSFSAAITAPLDRFKTLLMTDSAAYGGTVLSCASKIWRDEGIAGFAKGVVPRVTYIAPSVAIFFIVYEQVRQRL 347          
BLAST of mRNA_Ecto-sp13_S_contig6480.17264.1 vs. uniprot
Match: A0A7S1GKZ5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GKZ5_CYCTE)

HSP 1 Score: 207 bits (527), Expect = 1.090e-57
Identity = 135/324 (41.67%), Postives = 186/324 (57.41%), Query Frame = 1
Query:  112 RAVDAASGEAGLRVGLQGTWRSFGDSLRSARPHLIAAAVARCASITAGYPLDTIKTRLHLGRAAAATSIPDMYRGLGSSLAGQVPYGMLTFGTYELYKTALLERFPQLPRAITFCLAAVLGDMTGSLWLVPSEVVKVQMQGGLHATVGQAAMSIFRKSGVGGFYQGFSGQVGRDVPFRAIQLTSYELLRTL-LRTWRRREQTGVATERGDDSGGVPVGRARGGAATAAAGGDGEHAALSSGDAALLGGLAGAISATFTCPLDVVRTRLMVGGG--GGAAETWAAAIKA----GGLFSGLGTRVFYIGTSSAVFFVVYEAIKVRL 1062
            +A+ A  G  G      G    F  +++ AR HL AA VAR  SI A YP+DTIKTR+ + +      +  +Y G+  SL GQVPYG+LTFG+YE+YK AL ++FP +   + + LAA+LGD+TGS WL PSEVVK QMQ G+ AT G+A  +I++K G+ G YQG+ G V RDVPFR  QLTSYEL ++L LR  +RR    +  ++G  +    +                    LS+ DAA  G L+G  SA  T PLD ++T LM      GG+  + A+ I +     G  +GL  RV YI  S  +FF+ YE ++ R+
Sbjct:    2 QALAAPLGMRGGNNARSGPLAVFLTTIKEARRHLTAAGVARSVSIFAMYPIDTIKTRMQMDQ-PNPLRLNGLYNGVAGSLFGQVPYGVLTFGSYEMYKKALTDKFPSIRPVLVYALAAILGDLTGSFWLCPSEVVKQQMQAGMFATTGEAIRAIWQKQGLAGLYQGYLGGVARDVPFRVAQLTSYELTKSLYLRIKKRR----LPQQKGKKAVAPKL-------------------ELSAFDAAACGALSGTFSAAITTPLDRIKTLLMTNSAAYGGSVLSCASKIWSDEGVAGFTAGLLPRVTYIAPSVVIFFIAYEQVQQRM 301          
BLAST of mRNA_Ecto-sp13_S_contig6480.17264.1 vs. uniprot
Match: A0A7S2K4Y9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K4Y9_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.390e-56
Identity = 118/286 (41.26%), Postives = 171/286 (59.79%), Query Frame = 1
Query:  172 RSFGDSLRSARPHLIAAAVARCASITAGYPLDTIKTRLHLGRA-AAATSIPDMYRGLGSSLAGQVPYGMLTFGTYELYKTALLERFPQLPRAITFCLAAVLGDMTGSLWLVPSEVVKVQMQGGLHATVGQAAMSIFRKSGVGGFYQGFSGQVGRDVPFRAIQLTSYELLRTLLRTWRRREQTGVATERGDDSGGVPVGRARGGAATAAAGGDGEHAALSSGDAALLGGLAGAISATFTCPLDVVRTRLMVGG---GGGAAETWAAAIKA---GGLFSGLGTRVFYI 1008
            ++F +++ ++R HL AAA ARC SI   YP+DT+KTR+ +G     +     + +G+  SL GQVPYG+LTFG+YE+YK  LL++FP +     + +AA+LGD+TGS W+ PSEV+K QMQ G++ T G A  SI+ KSG+GGFYQG+ G + RDVPFR  QLTSYE+ + +   +R+R+   V                                 LS+ D+A++G +AG  SA  T PLD ++T LM  G   GG   +  ++ ++A   GGLF+G+  RV YI
Sbjct:   16 QAFLNTIINSRGHLAAAAAARCTSIFTMYPIDTLKTRMQMGNTFKESVQKGGIMKGVSGSLVGQVPYGVLTFGSYEVYKEMLLKKFPNVRPVFIYAMAAILGDVTGSGWVCPSEVIKQQMQAGMYPTTGDAIRSIWSKSGLGGFYQGYMGGLARDVPFRVAQLTSYEVAKKVFLNYRKRQDESVKE-------------------------------LSAVDSAVVGAVAGTFSAAITAPLDKIKTLLMTEGSKYGGSVMQCASSIVQAEGVGGLFAGVVPRVVYI 270          
BLAST of mRNA_Ecto-sp13_S_contig6480.17264.1 vs. uniprot
Match: A0A7S0C337_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C337_9STRA)

HSP 1 Score: 201 bits (511), Expect = 9.350e-55
Identity = 122/306 (39.87%), Postives = 177/306 (57.84%), Query Frame = 1
Query:  163 GTWRSFGDSLRSARPHLIAAAVARCASITAGYPLDTIKTRLHLGRAAAATSIPDMYRGLGSSLAGQVPYGMLTFGTYELYKTALLERFPQLPRAITFCLAAVLGDMTGSLWLVPSEVVKVQMQGGLHATVGQAAMSIFRKSGVGGFYQGFSGQVGRDVPFRAIQLTSYELLR-TLLRTWRRREQTGVATERGDDSGGVPVGRARGGAATAAAGGDGEHAALSSGDAALLGGLAGAISATFTCPLDVVRTRLMVGGGGGAAETWAAAIKA------GGLFSGLGTRVFYIGTSSAVFFVVYEAIKVR 1059
            G  + F ++L+ +R +L+AAAVAR  SI   YP+DTIKTR+ +G+         +Y+G+G SL GQVPYG+LTFG+YE+YK  LLE+FP+   ++ +  AAVLGD+TGS WL PSEVVK Q+QGG++ +  +A  +I+   G+GGFYQG+ G + RDVPFR  QLTS+E+ + + LR  R+R  +G++ +                              LS+ ++A +G + G  SA  T PLD ++T LM           + A K        G+F G+  RV YI  S  +FF  YE ++ R
Sbjct:   82 GPIQMFVETLKESRKYLVAAAVARSVSIFGMYPVDTIKTRMQMGQPMGLRD--GIYKGVGGSLFGQVPYGVLTFGSYEIYKKKLLEKFPETSPSVLYAFAAVLGDITGSGWLCPSEVVKQQLQGGMYTSTREAVSAIWSTKGIGGFYQGYIGGLARDVPFRVCQLTSFEVTKNSYLRLKRKR--SGMSED--------------------------AELTLSAAESAAVGAVCGTFSAAVTTPLDRIKTLLMTDSANYGGTVISCATKIIKDEGISGMFKGIVPRVAYIAPSVVIFFTAYEQVQNR 357          
BLAST of mRNA_Ecto-sp13_S_contig6480.17264.1 vs. uniprot
Match: A0A7S2V2B5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2B5_9STRA)

HSP 1 Score: 202 bits (513), Expect = 5.460e-54
Identity = 123/312 (39.42%), Postives = 177/312 (56.73%), Query Frame = 1
Query:  154 GLQGTWRSFGDSLRSARPHLIAAAVARCASITAGYPLDTIKTRLHLGRAAAATS----IPDMYRGLGSSLAGQVPYGMLTFGTYELYKTALLERFPQLPRAITFCLAAVLGDMTGSLWLVPSEVVKVQMQ-GGLHATVGQAAMSIFRKSGVGGFYQGFSGQVGRDVPFRAIQLTSYELLRTLLRTWRRREQTGVATERGDDSGGVPVGRARGGAATAAAGGDGEHAALSSGDAALLGGLAGAISATFTCPLDVVRTRLMVGGGG-GAAETWAAAIKAGG---LFSGLGTRVFYIGTSSAVFFVVYEAIKVRL 1062
            G+ G  + F  ++  A+ HLIAA VAR  S+   YPLDTIKTRL +  A  A        ++Y G+  S+ GQVPYG LTFG+YE+YK  L +    + +   + +AA +GD+TGS WLVPSEVVK +MQ G +   +G    +++R+ G+GGFY G+S Q+ RDVPFRAIQL SYE +++    WR   +     +  ++  GV                          +  +LG +AG+ SA  T PLDV++TR+M    G    E  ++ +++GG   LF GLG RV YI  S+A+FF  YE ++ R+
Sbjct:  160 GVVGFGQVFAKTIVEAKQHLIAAGVARGVSVLTMYPLDTIKTRLQMDPAMLAKVGGLFNGNLYAGVVGSMIGQVPYGTLTFGSYEVYKELLSKSLTGINQTFIYLIAACMGDITGSFWLVPSEVVKQKMQTGAMSQGLGGTVSAVWREKGLGGFYAGYSSQISRDVPFRAIQLVSYETVKSAYLRWRSNRRAAAGLKEQEELSGV--------------------------EGVILGAIAGSFSAACTTPLDVIKTRMMTEATGQSVVEVASSLLQSGGVQGLFRGLGARVGYIAPSAAIFFCTYELVRQRI 445          
BLAST of mRNA_Ecto-sp13_S_contig6480.17264.1 vs. uniprot
Match: A0A6V1WYU8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WYU8_HETAK)

HSP 1 Score: 191 bits (485), Expect = 8.990e-52
Identity = 123/285 (43.16%), Postives = 166/285 (58.25%), Query Frame = 1
Query:  256 YPLDTIKTRLH-----LGRAAAATSI----PDMYRGLGSSLAGQVPYGMLTFGTYELYKTALLERFPQLPRAITFCLAAVLGDMTGSLWLVPSEVVKVQMQGGLHATVGQAAM--SIFRKSGVGGFYQGFSGQVGRDVPFRAIQLTSYELLRTLLRTWR--RREQTGVATERGDDSGGVPVGRARGGAATAAAGGDGEHAALSSGDAALLGGLAGAISATFTCPLDVVRTRLMVGGGGGAAE----TWAAAIKAG--GLFSGLGTRVFYIGTSSAVFFVVYEAIK 1053
            YPLDTIKTRL      + R AA   +      +YRG  +SL GQ+PYGMLTFG+YE+YK  +   FP + +  T+ ++A+LGD+TGS WLVPSE+VK+++Q G    +G A     I   SG GGFY+G++GQ+ RDVPFRAIQLT+YE L+TL    R  RR   G+    G ++G                        LS  + A+LG +AG+ SA  T PLDV++TR+M+GGG         T A   K G   ++ GL  RV Y+G S A+FF+ YE +K
Sbjct:    2 YPLDTIKTRLQAEASQVVRPAAGAGLLAQAGALYRGCPASLFGQIPYGMLTFGSYEVYKELISTSFPNVSKTFTYFISAILGDITGSFWLVPSEIVKLRLQSGGGGGLGLAGTIGDILATSGPGGFYKGYTGQIARDVPFRAIQLTTYETLKTLYSRLRNARRVAAGLDPLEGAEAG-----------------------KLSGLEGAVLGAVAGSFSAGVTTPLDVIKTRMMMGGGAAGRSVLDVTRALVEKEGPMAVWKGLVPRVTYVGPSVAIFFMTYEVVK 263          
BLAST of mRNA_Ecto-sp13_S_contig6480.17264.1 vs. uniprot
Match: M2Y040_GALSU (Mitochondrial carrier (BOU / S-adenosylmethionine carrier) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y040_GALSU)

HSP 1 Score: 192 bits (487), Expect = 1.230e-51
Identity = 133/316 (42.09%), Postives = 179/316 (56.65%), Query Frame = 1
Query:  169 WRSFGDSLRSARPHLIAAAVARCASITAGYPLDTIKTRLHL--GRAAA--------ATSIPD-MYRGLGSSLAGQVPYGMLTFGTYELYKTALLERFPQLPRAITFCLAAVLGDMTGSLWLVPSEVVKVQMQGGLHATVGQAAMSIFRKSGVGGFYQGFSGQVGRDVPFRAIQLTSYELLRTLLRTWRRREQTGVATERGDDSGGVPVGRARGGAATAAAGGDGEHAALSSGDAALLGGLAGAISATFTCPLDVVRTRLMVGGGGGAAETWAAA-------IKAGGL---FSGLGTRVFYIGTSSAVFFVVYEAIK 1053
            WR+F   L  AR HL++ AVAR  S+ A YP+DTIKTRL L   R  A        A S P  +Y G+ S+L GQVPYGMLTFG+YE+YK+ L        R +   LAA++GD+TGSLWL PSEVVK ++Q G ++    A   IF   G+ GFYQG+ GQ+ RD+PFRAIQL SYE LR   R W++           +D                          LS+ +  ++G ++G+++A  T PLDV++TRLM    G +   +++A       ++  GL   + GLG RVFYIG S A+FFVVYE +K
Sbjct:   49 WRNFISVLYRARIHLLSGAVARGVSVFAMYPIDTIKTRLQLETSRGVANYWHSLRKALSKPKYLYWGVVSTLIGQVPYGMLTFGSYEIYKSWLTGSLRASSRLV-IVLAAIMGDLTGSLWLCPSEVVKSRLQAGQYSNTLDAIRKIFMTQGLKGFYQGYVGQIARDIPFRAIQLLSYEELRWRYRQWKKLSSI-------ED--------------------------LSNIENLVIGLVSGSVTAAVTTPLDVLKTRLMTQPIGVSTIAYSSAWDCARQLVQHEGLQAFWKGLGPRVFYIGPSGAIFFVVYEGMK 330          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6480.17264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ20_ECTSI2.930e-22796.90Mitochondrial carrier protein, putative n=2 Tax=Ec... [more]
A0A7S1BAX9_9STRA3.900e-6042.60Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S2SIM3_9STRA1.570e-5941.83Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A1Z5K5K0_FISSO6.360e-5839.57Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1GKZ5_CYCTE1.090e-5741.67Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2K4Y9_9STRA1.390e-5641.26Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S0C337_9STRA9.350e-5539.87Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2V2B5_9STRA5.460e-5439.42Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6V1WYU8_HETAK8.990e-5243.16Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
M2Y040_GALSU1.230e-5142.09Mitochondrial carrier (BOU / S-adenosylmethionine ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6480contigEcto-sp13_S_contig6480:63..4476 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score647.9
Seed ortholog evalue2.9e-183
Seed eggNOG ortholog2880.D8LJ20
Model size2092
KEGG rclassRC00017,RC00425
KEGG koko:K05857,ko:K14684,ko:K15111
KEGG TC2.A.29.18,2.A.29.23
KEGG ReactionR03332,R03435,R10952
KEGG Pathwayko00562,ko01100,ko04020,ko04070,ko04919,ko04933,map00562,map01100,map04020,map04070,map04919,map04933
KEGG ModuleM00130
Hectar predicted targeting categorysignal peptide
Exons6
EggNOG free text desc.S-adenosyl-L-methionine transmembrane transport
EggNOG OGsKOG0768@1,KOG0768@2759
Ec32 ortholog descriptionMitochondrial carrier protein, putative
Ec32 orthologEc-20_002340.1
EC3.1.4.11
Cds size1122
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6480.17264.1prot_Ecto-sp13_S_contig6480.17264.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6480 1033..4476 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463894.2043707-UTR-Ecto-sp13_S_contig6480:62..10321681463894.2043707-UTR-Ecto-sp13_S_contig6480:62..1032Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6480 63..1032 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463894.2164042-CDS-Ecto-sp13_S_contig6480:1032..12631681463894.2164042-CDS-Ecto-sp13_S_contig6480:1032..1263Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6480 1033..1263 -
1681463894.2305207-CDS-Ecto-sp13_S_contig6480:1591..18611681463894.2305207-CDS-Ecto-sp13_S_contig6480:1591..1861Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6480 1592..1861 -
1681463894.2461615-CDS-Ecto-sp13_S_contig6480:2450..25401681463894.2461615-CDS-Ecto-sp13_S_contig6480:2450..2540Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6480 2451..2540 -
1681463894.261463-CDS-Ecto-sp13_S_contig6480:3235..33371681463894.261463-CDS-Ecto-sp13_S_contig6480:3235..3337Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6480 3236..3337 -
1681463894.2706146-CDS-Ecto-sp13_S_contig6480:3709..38841681463894.2706146-CDS-Ecto-sp13_S_contig6480:3709..3884Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6480 3710..3884 -
1681463894.2787087-CDS-Ecto-sp13_S_contig6480:4222..44761681463894.2787087-CDS-Ecto-sp13_S_contig6480:4222..4476Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6480 4223..4476 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6480.17264.1

>prot_Ecto-sp13_S_contig6480.17264.1 ID=prot_Ecto-sp13_S_contig6480.17264.1|Name=mRNA_Ecto-sp13_S_contig6480.17264.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=374bp
MLSSYLFSTVAVLRPSPRMRVVYASIVTSLLLSFLSIRAVDAASGEAGLR
VGLQGTWRSFGDSLRSARPHLIAAAVARCASITAGYPLDTIKTRLHLGRA
AAATSIPDMYRGLGSSLAGQVPYGMLTFGTYELYKTALLERFPQLPRAIT
FCLAAVLGDMTGSLWLVPSEVVKVQMQGGLHATVGQAAMSIFRKSGVGGF
YQGFSGQVGRDVPFRAIQLTSYELLRTLLRTWRRREQTGVATERGDDSGG
VPVGRARGGAATAAAGGDGEHAALSSGDAALLGGLAGAISATFTCPLDVV
RTRLMVGGGGGAAETWAAAIKAGGLFSGLGTRVFYIGTSSAVFFVVYEAI
KVRLGVVAVSSPPAAISKAKRQQ*
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mRNA from alignment at Ecto-sp13_S_contig6480:63..4476-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6480.17264.1 ID=mRNA_Ecto-sp13_S_contig6480.17264.1|Name=mRNA_Ecto-sp13_S_contig6480.17264.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4414bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6480:63..4476- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTGAGCTCCTATTTGTTCAGTACTGTTGCCGTGTTGCGGCCATCCCC GCGGATGCGCGTAGTTTATGCATCCATCGTGACATCACTCCTGCTCAGCT TTCTGAGTATCCGAGCTGTTGATGCTGCCAGCGGGGAGGCAGGACTACGT GTAGGACTTCAAGGCACATGGCGAAGCTTCGGGGACTCTCTACGCTCTGC CAGGCCGCATTTGATCGCTGCCGCAGTAGCGAGATGTGCGAGCATTACTG CTGGGTGAGCGTGTTGGCATTGCGAAAGTATCATGTTTTGCGACAAGAGC GAACACTATCCGTAGCTTGGAGAGTTGCAATTTCTAGTTTTGTAACTTCA AGCACGATAATATAGAGAAGCCGAGTGCTGGTCCGTCGCCACGAATCGAA GATACGATCATGGCCTCCACAGGGCACAGCAATTGCAGAGATCTTTTTCA GATATCTTGAAATAATAGGTCTCGTGTAGAAATACTTCGCAGCAACTCCT GTTGAAGCAACGAAATAAGTAGAAAACTGCACACCTCTCGCAGTCACGAC CACCTTTTCCGTCTCCTTCATTGCCTCCCCATTTACCCCCAGCTACCCAC TAGACACGATAAAGACGCGATTGCACCTGGGCAGAGCAGCTGCGGCGACG TCGATTCCCGACATGTACAGAGGACTAGGTAGCTCTCTCGCCGGACAGGT GCCATACGGAATGCTGACCTTCGGAACGTACGAGTTGTACAAGACGGCTT TGCTGGAGAGATTCCCGGTGCGGCAGCGCAGGTCGCGATTATTACGGTAG CCGGTGTCTCCAGTTCTACATATGTTGAACGTGGGGGAGACCTTGGTGTC AAACGTGTGTACCATAACCATTACAAAAAGCAAGATAGAAAGGCCCGCCC ACTGTGTGCCAGAAGCTGCCGGTTTCTCCGTCCTTGCCCTCCGAACAGGT CGTGCTGACGGTGGACATGCTCTGCTATGAGATACCACGACGCACTGCTT CACCGTTGCAGTACAAGTATGCCATCGTAGCACTGGTAGCATCGCATGCC ACGCATAATGAACGCCGCCTTACGGTGCCCCCGCTCACCTTGCGCACTCT TTGCCACTGCAAAACCGTGGACGATGATGGCCGCCTCAGCAACTTCCGCG GGCCATCACGTTTTGCTTGGCCGCGGTTCTTGGGGACATGACGGGTAGCC TTTGGCTCGTGCCTTCCGAAGTGGTCAAGGTGCAGATGCAGGTAAGCGAC GATTGCCCCCACCGGTCAGCTCCATGCTCTCTGCTAAACACAAAAATACT GCTGTGCAACGGTCCGCGCCAAACGCTTCGGTAGGCGACAGACATTCTCG CTCGCACTGCCTTTTCCTACGAAGTGTACGGAAGCAGTCTCTCACACCCT ATCGTTGGAAAATTTCCTCGTAGTATCTGAGGCCCGATTGAACGATCATG TCGTTTGTTGCAAGCTGGTTGCGCGTCGAATGTAACCGTTTGTGGAACGG AAGTACTGCTGTAGGACACAAAGTTATCGCGGCAGTGTACAAAGTAGTCC TATATTATCGGTCAAGAGGAAGTTTCGGTTCACTGCAGAGAGAAATGCGA CGTGACCGCGACGATGACGTACGGATGCCTCGTCGAGGTCAGTCCTGAAC AAACGAAGACGTGTGTGGTGTGATATCCATCGGTTTTACATCTCTGGGTT TAGGACACTCACAAGGGGTTCCTCATACAACAAACAAACCTCCCCCGATC GACACGCGAGTTCTACCTTCGCTTACATTAACGCCAATTCCACGAGTTCC CGCGATATTTACATAGTGGCATCACGGCGCAGAGCTAAGCCCGCCAACAG TGTCGGCGAGAAACCCCTTGGTCTCTTATTCGTTCGTTTCGACCGCCTTT TCTCAACCCCCCGGATATCCGTCTGCATATGCGTAGGGAGGCCTTCACGC GACCGTCGGCCAAGCGGCGATGTCTATCTTTAGGAAGTCCGGCGTTGGCG GCTTCTACCAAGGTTTCAGCGGGCAGGTGAAGAAATGCGAACAAACGCCC CTTGTCCCAAAGCACGCAAAATGGTGAAATGTGCACGATCCATGCCCCGC CGTGTGCACGGTGCCAGAATTTTTCGTCCTAGCCGCACGTCGCGAGCCGC ATGTCGCGATGTTTTACATTGTGTGAGATTCTTTGCGGTCTAAGCGCGTA GGCCTAGCGCACGTGCTATACCAACTCGATTCACAGGTACGTATTGTAGT GTCCGCGGCTGTTTATGCGCAGAAATAATCAGACAGGAGTTGTCGCCCAC GTGAGAAGCACACCCTAGCTGCTCCTTGCGCCTAGGTGCCCTCCATCCAG AGGTCTCCTACATTGGACTACAGTACTGAAAATGAGTAGAGGAATAGGTA AGAGCTAAGAAGTGCCTGACTACATGGTTCACCCTCTTGGACGGCCTTCT CCTGCACACCCCCTTTCCCTCTAACCCCGCTTCATAGCCGTATCCAGACC CTCTTCTGTACCCAATTCGTGTGCACATAAACTCGTACAATACCGCGGCC TTGTCGACGGTTGGTGAAACGGGTCGTATACGCACGCCACGTCCCGGGGG CTCTCCCGGTGTCAGGTGGGACGCGACGTTCCCTTCCGAGCCATCCAGCT CACCTCGTACGAGCTCCTACGGACGCTGCTCAGGACGTGGCGAAGACGGG AGCAAACAGGAGTAGCGACCGAGCGCGGTGATGACAGCGGCGGTGTTCCG GTAGGGAGGGCTCGAGGCGGCGCGGCGACGGCAGCGGCGGGGGGTGACGG CGAGCACGCGGCGCTTTCTTCGGGAGATGCCGCGCTGCTCGGCGGGCTGG CGGGAGCCATCAGCGCGACGTTCACCTGCCCGCTGGTATGTTGTTCTTCC TCCCGCGAACGGCCTCGTCGCGCCCCATCACACGCAGGAAGTAACGCAAA CATTTCGTCGCTGTTGCTGGCACGCTATCGGTATCCATACAAATATCACG ATGTGCTGGGTCTGTTTCGGACAACGTGGCGACAATACCCGATATTCGCA CACCTCCTTGATCCACGGATATTACAATTGCCTACGCAACGTTCATTTTC TTTTCGCCTCTTGGCTTTTGGTCAATTTGGCCAGCAAGCCCACTCGCTGC ATGGCTCGCGGCATGGTTACACTGACCCATTGCAACCCACGTGTTGCCTG CGCGTACGCGCAGGACGTCGTCCGCACGCGCTTGATGGTCGGCGGCGGCG GCGGTGCGGCAGAGACTTGGGCCGCGGCCATCAAGGCCGGGGGGCTGTTC TCGGGGCTAGGAACCCGCGTCTTCTACATCGGCACGTCCAGCGCGGTCTT CTTTGTCGTATACGAGGCGATCAAGGTTCGCCTCGGGGTAGTGGCGGTGT CGTCGCCACCTGCTGCAATCAGTAAGGCGAAACGGCAGCAGTGAATTCGT TGCTCGATCGCTGATTGGGTGATCCCGCATTGACGCGCGGAAGGTGGGTG GGTAGTGCAAAGTGTGCCGGGCGCACCAACAAATTGTTTTCTGGCAAGGC TGCAGGGCTTTGGGGTCGTTTAGGCACTCGGTGCTGGTGGCAGTTGAGAC GTCCTGGGCGATACCCAAGCCAAGTGTGCACGATTGTTGTGTGTATTTGT GTCTGCGAAATCGATAGAACTTGTTGTTGTCGACTTGTTTATGTACTGCA TATCTAGTGAATTTAGTTTACTTTGGGAACACGTTTGTTTCGTGTACCCC CTCTCGATGTTGGCATAACCTGAGGAACAGCGGTGGTATTGTAGCGCCAG AGTGTTGGCCCATGCGCGCAAACGCCCGCAGATGTACATCTTCCGCGGTC CTCTTACATCTTCGTTGTCTGTGTTCCTGAGGTACAAGATATGTGCCTGA CAGAAAGTGATGGCTGTGGCAGGCATATCCGTCTCATATCTGCCTTTCAT ATGCATTGCAACATGTAGTCCCCCTCCGATTGTGGTATGTTGCTCGGTGC TGTTATTTCTGGCCTCTGTTTTTTTCTCTCCTTTTTCGCATGTGTGAGCG AACTCCGGCACAGTAGTAGGGGCAGAAGGATATAATCTTGCGAGTTTGCT GTCCTGAGTGGCTTTTTCTCTTTTTTGGCCTCGCGTGTCGGGTGGGTGGG AGCGATGGGCTCTCCTGTATGTCTCCTTGTCTGAAAAGTTGCTCTACGTT TGAATGCTGTCGGGGGCTGAAATGTCCTGGTTCAATAGCGTGTTTGTGTT GATTTGTCTGGACCATTGTGTGTTTTTTCTTCTTCTTTTTCACGGTGTAC CTTCCCTTGAGTATTTTGCGTGTGACCGCGGAATGTGTCCGCATTAGCTG GACCGCCACCGGTGTTCGGTGATGATTAGGATAGATTTAGATATGAAGAC AAAAAACAACAAAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6480:63..4476-

>mRNA_Ecto-sp13_S_contig6480.17264.1 ID=mRNA_Ecto-sp13_S_contig6480.17264.1|Name=mRNA_Ecto-sp13_S_contig6480.17264.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1122bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6480:63..4476- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTGAGCTCCTATTTGTTCAGTACTGTTGCCGTGTTGCGGCCATCCCC
GCGGATGCGCGTAGTTTATGCATCCATCGTGACATCACTCCTGCTCAGCT
TTCTGAGTATCCGAGCTGTTGATGCTGCCAGCGGGGAGGCAGGACTACGT
GTAGGACTTCAAGGCACATGGCGAAGCTTCGGGGACTCTCTACGCTCTGC
CAGGCCGCATTTGATCGCTGCCGCAGTAGCGAGATGTGCGAGCATTACTG
CTGGCTACCCACTAGACACGATAAAGACGCGATTGCACCTGGGCAGAGCA
GCTGCGGCGACGTCGATTCCCGACATGTACAGAGGACTAGGTAGCTCTCT
CGCCGGACAGGTGCCATACGGAATGCTGACCTTCGGAACGTACGAGTTGT
ACAAGACGGCTTTGCTGGAGAGATTCCCGCAACTTCCGCGGGCCATCACG
TTTTGCTTGGCCGCGGTTCTTGGGGACATGACGGGTAGCCTTTGGCTCGT
GCCTTCCGAAGTGGTCAAGGTGCAGATGCAGGGAGGCCTTCACGCGACCG
TCGGCCAAGCGGCGATGTCTATCTTTAGGAAGTCCGGCGTTGGCGGCTTC
TACCAAGGTTTCAGCGGGCAGGTGGGACGCGACGTTCCCTTCCGAGCCAT
CCAGCTCACCTCGTACGAGCTCCTACGGACGCTGCTCAGGACGTGGCGAA
GACGGGAGCAAACAGGAGTAGCGACCGAGCGCGGTGATGACAGCGGCGGT
GTTCCGGTAGGGAGGGCTCGAGGCGGCGCGGCGACGGCAGCGGCGGGGGG
TGACGGCGAGCACGCGGCGCTTTCTTCGGGAGATGCCGCGCTGCTCGGCG
GGCTGGCGGGAGCCATCAGCGCGACGTTCACCTGCCCGCTGGACGTCGTC
CGCACGCGCTTGATGGTCGGCGGCGGCGGCGGTGCGGCAGAGACTTGGGC
CGCGGCCATCAAGGCCGGGGGGCTGTTCTCGGGGCTAGGAACCCGCGTCT
TCTACATCGGCACGTCCAGCGCGGTCTTCTTTGTCGTATACGAGGCGATC
AAGGTTCGCCTCGGGGTAGTGGCGGTGTCGTCGCCACCTGCTGCAATCAG
TAAGGCGAAACGGCAGCAGTGA
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