prot_Ecto-sp13_S_contig6462.17240.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6462.17240.1
Unique Nameprot_Ecto-sp13_S_contig6462.17240.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length153
Homology
BLAST of mRNA_Ecto-sp13_S_contig6462.17240.1 vs. uniprot
Match: D7FID1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FID1_ECTSI)

HSP 1 Score: 288 bits (738), Expect = 1.940e-98
Identity = 148/152 (97.37%), Postives = 148/152 (97.37%), Query Frame = 0
Query:    1 MYGKESVPVAGQVAVMSAALVGTGSSTLLLNLCVSPYVFRMAEIYEGRGAQGEDGDVRKKPRNKKNRYGMPKLSGRRFRVERMNILGVRRTTEFSIDEVEPMPNTSRPFVSFKAAGSYYFIQGHDMADKVLLQTLLGRELKDHEKRTPISAT 152
            MYGKESVPVAGQVAVMSAALVGTGSSTLLLNLCVSPYVFRMAEIYEG  AQGEDGDVRKKPRNKKNRYGMPKLSGRRFRVERMNI GVRRTTEFSIDEVEPMPNTSRPFVSFKAAGSYYFIQGHDMADKVLLQTLLGRELKDHEKRTP SAT
Sbjct:    1 MYGKESVPVAGQVAVMSAALVGTGSSTLLLNLCVSPYVFRMAEIYEGGVAQGEDGDVRKKPRNKKNRYGMPKLSGRRFRVERMNIFGVRRTTEFSIDEVEPMPNTSRPFVSFKAAGSYYFIQGHDMADKVLLQTLLGRELKDHEKRTPNSAT 152          
BLAST of mRNA_Ecto-sp13_S_contig6462.17240.1 vs. uniprot
Match: A0A6H5L1C6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1C6_9PHAE)

HSP 1 Score: 282 bits (722), Expect = 5.170e-94
Identity = 145/152 (95.39%), Postives = 146/152 (96.05%), Query Frame = 0
Query:    1 MYGKESVPVAGQVAVMSAALVGTGSSTLLLNLCVSPYVFRMAEIYEGRGAQGEDGDVRKKPRNKKNRYGMPKLSGRRFRVERMNILGVRRTTEFSIDEVEPMPNTSRPFVSFKAAGSYYFIQGHDMADKVLLQTLLGRELKDHEKRTPISAT 152
            MYGKESVPVAGQVAVMSAALVGTGSSTLLLNLCVSPYVFRMAEIYEG  AQGEDG+VRKKPRNK NRYGMPKLSGRRFRVERMNI GVRRTTEFSIDEVEPMPNTSRPFVSFKAAGSYYFIQGHDMADKVLLQTLLGRELKDHEKR P SAT
Sbjct:  136 MYGKESVPVAGQVAVMSAALVGTGSSTLLLNLCVSPYVFRMAEIYEGGVAQGEDGEVRKKPRNKTNRYGMPKLSGRRFRVERMNIFGVRRTTEFSIDEVEPMPNTSRPFVSFKAAGSYYFIQGHDMADKVLLQTLLGRELKDHEKRPPNSAT 287          
BLAST of mRNA_Ecto-sp13_S_contig6462.17240.1 vs. uniprot
Match: W7TRL5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRL5_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.570e-15
Identity = 54/144 (37.50%), Postives = 74/144 (51.39%), Query Frame = 0
Query:    3 GKESVPVAGQVAVMSAALVGTGSSTLLLNLCVSPYVF--RMAEIYEGRGAQGEDGDVRKKPRNKKNRYGMPKLSGRRFRVERMNILGVRRTTEFSIDEVEPMPNTSRPFVSFKAAGSYYFIQGHDMADKVLLQTLLGRELKDHE 144
            G ESVP+A  VA+    L+ T   T+LL+    PY+F  R+A          E  D   K      R   P +    F  + ++ L  R TT F++ +V+P+PN++RPFVSF A    YF+ G    DK LL +LLGR LK  E
Sbjct:  145 GSESVPMAANVALTGIVLLATCGPTILLHAFTKPYIFALRVAPFVTADNDL-EISDSGDKSDRAVRRNTTPDMH---FSADTIDFLSRRITTSFNLSDVKPLPNSTRPFVSFSARDRLYFVHGETFPDKHLLHSLLGRPLKKSE 284          
BLAST of mRNA_Ecto-sp13_S_contig6462.17240.1 vs. uniprot
Match: UPI0009E48F37 (uncharacterized protein LOC110023651 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E48F37)

HSP 1 Score: 53.1 bits (126), Expect = 1.940e-5
Identity = 48/133 (36.09%), Postives = 62/133 (46.62%), Query Frame = 0
Query:   14 AVMSAALVGTGSSTLLLNLCVSPYVFRMAEIYEGRGAQGEDGDVRKKPRNKKNRYGMPKLSGRRFRVERMNILG--VRRTTEFSIDEVEPMPNTSRPFVSFKAAGSYYFIQGHDMADKVLLQTLLGRELKDHE 144
            AV S  +V + S+T  L+  VSPYV ++      R   G D                       F VE M  L   V RT +FS   V P P T+RPFVSF+A G++YF+ G    +K LL  L  RE + HE
Sbjct:  145 AVASTVIVLSASTTAALHWFVSPYVHKL------RWRPGSDS----------------------FEVEMMTWLATYVPRTIKFS--SVRP-PETNRPFVSFRADGNFYFVDGEHCHNKALLARLTPRE-RAHE 245          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6462.17240.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FID1_ECTSI1.940e-9897.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1C6_9PHAE5.170e-9495.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TRL5_9STRA1.570e-1537.50Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
UPI0009E48F371.940e-536.09uncharacterized protein LOC110023651 n=1 Tax=Phala... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009724TMEM70 familyPFAMPF06979TMEM70coord: 77..137
e-value: 8.3E-5
score: 23.0
IPR009724TMEM70 familyPANTHERPTHR13281UNCHARACTERIZEDcoord: 2..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..152
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6462contigEcto-sp13_S_contig6462:1603..2896 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6462.17240.1mRNA_Ecto-sp13_S_contig6462.17240.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6462 598..3830 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6462.17240.1 ID=prot_Ecto-sp13_S_contig6462.17240.1|Name=mRNA_Ecto-sp13_S_contig6462.17240.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=153bp
MYGKESVPVAGQVAVMSAALVGTGSSTLLLNLCVSPYVFRMAEIYEGRGA
QGEDGDVRKKPRNKKNRYGMPKLSGRRFRVERMNILGVRRTTEFSIDEVE
PMPNTSRPFVSFKAAGSYYFIQGHDMADKVLLQTLLGRELKDHEKRTPIS
AT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009724TMEM70