prot_Ecto-sp13_S_contig645.17219.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig645.17219.1
Unique Nameprot_Ecto-sp13_S_contig645.17219.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length849
Homology
BLAST of mRNA_Ecto-sp13_S_contig645.17219.1 vs. uniprot
Match: A0A6H5LKJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKJ8_9PHAE)

HSP 1 Score: 868 bits (2244), Expect = 8.520e-306
Identity = 604/806 (74.94%), Postives = 626/806 (77.67%), Query Frame = 0
Query:   44 GSADAAAGVGNGNAPSVVSKAQKRAGSRSNKKAKTGEPAVLWSPGKGKGPEDRASLDTGGGRNGDVQNLSILANEFKERYGEEVDAPDDDGGGMTTGSNVFETPKRKGRLSGGAKPRTPVEEVVKSMSPARLAAEAQKARARAREKRFGXXXXXXXXX-SKPPSSPAPPARPFPVGKPPDTLRGAPPAAAVSKVPMNRAAGVQGDKNGKGTSAAVTTASSQAQQPQGGKGILRTAAPKGSTPANGPGRSSGGSAPTVVSTVAAPKGANLPVSATSAAAAVPALVTPDAEEVDASAASKTGSRAAATTVQAEAIPMDEPPAXXXXXXAAPKRPAAEGGDVGAAEXXXXXXLTLPXXXXXXXTGGKIHTLRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGERQGFEPPTXXXXXXXXXXXXXXXXXXXRKAATVSSAGSKPSPVAAPSTGFKKPSVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLAXXXXXXXXXXXXXXXXAVASRLSVPAEGSSPNNLALTRKGSWGPSFGIPSAPAGTPPPTPAPSPDVAAANKTNPWILSPESPTFGRNRGRPLAQAFPKPSQPTRGSXXXXXXXXXXXXXXXXXXXXXLASATRSAGEAASVQPDTRSSSGGCGDGGIREGRALGDNGTPATSRLASSTPCRASPQGGTRGANMANSSSRLTHPLTGAGASTGTNAQSPPSNRPSGELLPLDRAAERPAAAWQAGGGSAACSPAGSTLDAAAETAAGTDAGAAPASGGVVVLGVRMGGKAGELLERLKREREESLDFERKLTQALMDL 848
            GSADAAAGVGNGNAPS VSKAQ+RA SR+NKKAKTGEP VLWSPGKGKGPEDRASLDTGGGRNGDVQNLS+LA  FKERYGEEVDAPDDD  GMTTGS+VFETPKRKGRLSGGAKPRTPVEE  +SMSPARLAAEAQKARARARE    XXXXXXXX  SKPPSSPAP ARPFPVG+PPD   GAPP AA+SKVPMNRAAG  GDKN KGT+AAVTT SSQAQQPQGGKGI  TAAPK STPANGPG SS GSAPT VS +AAPKGA  P+SAT+AAAAVPALVTPDAE+VDASAASKTGSRAAA T+QAEAIPMDE PA XXXXX                 XX    LTLP       TGGKIHTLRL                             ER+ FEPPT  XXXXXXXXXXXXXXXXX+KAATVSS GSKPSPVAAPSTG KKPSVA           XXXXXXXXXXXX      A LA                AVASRLS+P EGSSP NLALT +GSWGPSFGIP APAG PPPTPA SPDVAAANKTNPWILSPESPTFGRNRGRPLAQAFPKPSQPTRGSXXXXXXXXXXXXXXXXX    LASATRSAGEAASVQPD+RSSSGGCGDGGIREGRAL  NGTPAT R A +TPCRASPQGGTRGA++ANSSS LTHPL  AGAS G NAQ P S   SG LLP +RA             S AC P GS LDAAAETA GTDAGAA ASGG VVLGVRMGGKA ELLERLKREREESLDFERKLTQALMDL
Sbjct:   12 GSADAAAGVGNGNAPSAVSKAQRRASSRANKKAKTGEPGVLWSPGKGKGPEDRASLDTGGGRNGDVQNLSVLAKNFKERYGEEVDAPDDDDDGMTTGSSVFETPKRKGRLSGGAKPRTPVEEAARSMSPARLAAEAQKARARAREXXXXXXXXXXXXSFSKPPSSPAPSARPFPVGEPPDAPLGAPPPAAMSKVPMNRAAGGHGDKNRKGTNAAVTTTSSQAQQPQGGKGIASTAAPKDSTPANGPGGSSNGSAPTAVSPMAAPKGATSPISATNAAAAVPALVTPDAEKVDASAASKTGSRAAAITIQAEAIPMDETPAAXXXXXXXXXXXXXXXXXXXXXXXXVKKVLTLPSSQSPPSTGGKIHTLRLRLRTDLVADSKQPAPAAPSPATAAGGGAEERKSFEPPTPPXXXXXXXXXXXXXXXXXKKAATVSSVGSKPSPVAAPSTGIKKPSVASISTVASAAPAXXXXXXXXXXXXAP----APLATATTPT----------AVASRLSIPPEGSSPRNLALTLQGSWGPSFGIPGAPAGAPPPTPASSPDVAAANKTNPWILSPESPTFGRNRGRPLAQAFPKPSQPTRGSXXXXXXXXXXXXXXXXXRAAGLASATRSAGEAASVQPDSRSSSGGCGDGGIREGRALRGNGTPATPRPAGTTPCRASPQGGTRGADVANSSSPLTHPLPRAGASAGMNAQPPLSYGQSGGLLPPERAXXXXXXXXXXXX-SLACWPVGSALDAAAETATGTDAGAAAASGGFVVLGVRMGGKAAELLERLKREREESLDFERKLTQALMDL 802          
BLAST of mRNA_Ecto-sp13_S_contig645.17219.1 vs. uniprot
Match: D8LQA6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA6_ECTSI)

HSP 1 Score: 498 bits (1282), Expect = 9.890e-167
Identity = 327/390 (83.85%), Postives = 338/390 (86.67%), Query Frame = 0
Query:    1 MRNDRGKRGGKXXXXXXXXXXXXGQPRXXXXXXXXXXXXKRAAGSADAAAGVGNGNAPSVVSKAQKRAGSRSNKKAKTGEPAVLWSPGKGKGPEDRASLDTGGGRNGDVQNLSILANEFKERYGEEVDAPDDDGG-GMTTGSNVFETPKRKGRLSGGAKPRTPVEEVVKSMSPARLAAEAQKARARAREKRFGXXXXXXXXXSK----PPSSPAPPARPFPVGKPPDTLRGAPPAAAVSKVPMNRAAGVQGDKNGKGTSAAVTTASSQAQQPQGGKGILRTAAPKGSTPANGPGRSSGGSAPTVVSTVAAPKGANLPVSATSAAAAVPALVTPDAEEVDASAASKTGSRAAATTVQAEAIPMDEPPAXXXXXXAAPKRPAAEGGDVGAAE 385
            MRNDRGKRGGK XXXXXXXXXXX QPR    XXXXXXXXKRAAGSADAAAGVGNGNAPS VS AQ+RAGSR+NKKAKTGEP VLWSPGKGKGPE RASLDTGG RNGDV NLS+LA +FKERYGEEVDAPDDD   GMTTGS+VFETPKRKGRLSG AKPRTPVEE  +SMSPARLAAEAQ+ARARARE+RFGXXXXXXXXX      PPSS APPARPFPVGKPPD  RGAP AAAVSK PMNRAAG QGDKNGKGT+AAVTT SSQAQQPQGGKGI+RTAAPKGSTPA GPG SS GSAPT VS VAAP+GA  PVS TSAA  VPALVTPDAEEVDASAASKTGSRAA T VQAEAIPMDE PA      AAPKRPAAEGGDV AAE
Sbjct:    1 MRNDRGKRGGKGXXXXXXXXXXXXQPRRGGRXXXXXXXXKRAAGSADAAAGVGNGNAPSAVSNAQRRAGSRANKKAKTGEPGVLWSPGKGKGPEGRASLDTGGWRNGDVHNLSVLAKDFKERYGEEVDAPDDDDDDGMTTGSSVFETPKRKGRLSGDAKPRTPVEEAARSMSPARLAAEAQRARARAREERFGXXXXXXXXXXXXXXXPPSSLAPPARPFPVGKPPDAPRGAPRAAAVSKAPMNRAAGGQGDKNGKGTNAAVTTTSSQAQQPQGGKGIVRTAAPKGSTPAIGPGGSSSGSAPTAVSPVAAPQGATFPVSVTSAAVTVPALVTPDAEEVDASAASKTGSRAAVTAVQAEAIPMDETPAAAISA-AAPKRPAAEGGDVAAAE 389          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig645.17219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LKJ8_9PHAE8.520e-30674.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQA6_ECTSI9.890e-16783.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig645contigEcto-sp13_S_contig645:12131..15768 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig645.17219.1mRNA_Ecto-sp13_S_contig645.17219.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig645 12091..16338 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig645.17219.1 ID=prot_Ecto-sp13_S_contig645.17219.1|Name=mRNA_Ecto-sp13_S_contig645.17219.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=849bp
MRNDRGKRGGKGGGKGGKGDGRGGQPRRGGRGGGGGGSGKRAAGSADAAA
GVGNGNAPSVVSKAQKRAGSRSNKKAKTGEPAVLWSPGKGKGPEDRASLD
TGGGRNGDVQNLSILANEFKERYGEEVDAPDDDGGGMTTGSNVFETPKRK
GRLSGGAKPRTPVEEVVKSMSPARLAAEAQKARARAREKRFGGGGGGGGS
SSKPPSSPAPPARPFPVGKPPDTLRGAPPAAAVSKVPMNRAAGVQGDKNG
KGTSAAVTTASSQAQQPQGGKGILRTAAPKGSTPANGPGRSSGGSAPTVV
STVAAPKGANLPVSATSAAAAVPALVTPDAEEVDASAASKTGSRAAATTV
QAEAIPMDEPPAAATTSAAAPKRPAAEGGDVGAAEPPVKKALTLPSPQSP
PATGGKIHTLRLRLRTDLEADSKQPAPAAPSPAAAAGGGAGERQGFEPPT
SPADGGVEECKGFDPPNLPRKAATVSSAGSKPSPVAAPSTGFKKPSVASV
GTAASAAPAVAPVPAAPATTITAAPAPALLAPAPSAPAPLATATTPIAVA
SRLSVPAEGSSPNNLALTRKGSWGPSFGIPSAPAGTPPPTPAPSPDVAAA
NKTNPWILSPESPTFGRNRGRPLAQAFPKPSQPTRGSSSSSSISSRSRSA
AGAAGAAGLASATRSAGEAASVQPDTRSSSGGCGDGGIREGRALGDNGTP
ATSRLASSTPCRASPQGGTRGANMANSSSRLTHPLTGAGASTGTNAQSPP
SNRPSGELLPLDRAAERPAAAWQAGGGSAACSPAGSTLDAAAETAAGTDA
GAAPASGGVVVLGVRMGGKAGELLERLKREREESLDFERKLTQALMDL*
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