mRNA_Ecto-sp13_S_contig643.17190.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig643.17190.1 vs. uniprot
Match: A0A6H5LD10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD10_9PHAE) HSP 1 Score: 1092 bits (2824), Expect = 0.000e+0 Identity = 632/813 (77.74%), Postives = 647/813 (79.58%), Query Frame = 2
Query: 32 RSGRERTADLPVPSAITGGPLAARAATTEQRNPVAPLPKWSSLQFWGTNGPRGEGGEVKVGDLAARDGAGDGGMYLGAESTATPGANRTYHCQICLDDRPVEAGFVLSACGHVFCRECLKAYVTSKINDAEVYPACFNVDEGFRAVEGGEKVEGSVGVGREGASGWGRRXXXXXXXXXXXXXXXXXXXXXXNGQPREEKREGCGAVISPSDIKDLIKTDAGTQRKYARFLFSREHKAARECPRCTKLSVGNPTVSLEMRCGECGCVFCYEHGGAHQGKPCAEYVEATADETNRTMALIGRMTKPCPGCQTPVEKLGGCNQMVCMHCNCSFCWICMEHVDRGTFPVHFQWWNVRGCPNQQLQEDSHHSPRGRQCHKLLSAVQIVVVGPLALLLTAASSLACVCCLPAFRLPPRQLFTGCISGWGNFVMVLPLLPVVLVGAVLAAVLYLVMLPARLFKVISRKCNSRTTSLDLTASRTPSNSRDARSGSXXXXXXXXXXXXXXXXXXXXXXXX--------DPSAVESGTIGAAAEAVXXXXXXXXXXXXXXXXASALAILTEVLGPQLLRGWQEDRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRYRRAPHPSALSPRSWMPPLPFHQYMSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------VASTAAPDGEG*TDEEGGVIFRDGDASRRSAGEVTVGKASAVAPPVDEEALPEAAAESGRDDGSVGVDGAVLGSRVVAVGGEGAPPVGAMVAADVLE 2404
RSGRERTADLPVPSAITG PLAARAATT+QRNPVAPLPKWSSLQFWGTNGP EGGE KVGDLAARDGAGDGGMYLGAESTAT GANRTYHCQICLDDRP EAGFVLSACGH+FCRECLKAYVTSKINDAEV+PACFNVD+GFRAVEGGEKVEGSVG+GREGASGWGRR XXXXXXXXXXXXNGQPREEKREGCGAVI PSDIKDLIKTD GTQRKYARFLFSREHKAARECPRC LSVG+P+ SLEMRCG CGCVFCYEHGGAHQGK CAEYV+ATADETNRTMALIGRMTKPCPGCQTPVEKLGGCNQMVCMHC+CSFCWICMEHVDRGTFPVHFQWWNVRGCPNQQLQEDSH SPRGRQCHKLLSAVQIVVVGPLALLLT ASSLACVCCLPAFRL PRQLFTGCISGWGNFVMVLPLLPVVLVGAVLAAVLYLVMLPARLF+ ISRKC+SRTTSLDLTASR P+NSRDARSGS XXXXXXXXXXXX DP+A+ESGTIGAAAEAV ASALAILTEVLGPQL RG Q DRRD XXXXXXXX GRRYRRAPHPSALSP SWMPP PFHQY SGSG XXXXXXXXXXX V STAAPDGEG TDEEGGV FRDGDASRRSAGEVTV KAS VAPPV EEALP+AAAESGRDDGSVGVDGAVLGSRVVAVG EGAPPVGA VAADVLE
Sbjct: 53 RSGRERTADLPVPSAITG-PLAARAATTQQRNPVAPLPKWSSLQFWGTNGPGSEGGEGKVGDLAARDGAGDGGMYLGAESTATTGANRTYHCQICLDDRPAEAGFVLSACGHLFCRECLKAYVTSKINDAEVHPACFNVDDGFRAVEGGEKVEGSVGMGREGASGWGRRRGGGDLERARXXXXXXXXXXXXNGQPREEKREGCGAVIIPSDIKDLIKTDKGTQRKYARFLFSREHKAARECPRCANLSVGDPSASLEMRCGACGCVFCYEHGGAHQGKTCAEYVDATADETNRTMALIGRMTKPCPGCQTPVEKLGGCNQMVCMHCHCSFCWICMEHVDRGTFPVHFQWWNVRGCPNQQLQEDSHQSPRGRQCHKLLSAVQIVVVGPLALLLTVASSLACVCCLPAFRLSPRQLFTGCISGWGNFVMVLPLLPVVLVGAVLAAVLYLVMLPARLFRAISRKCSSRTTSLDLTASRRPNNSRDARSGSRKRXXXXXXXXXXXXAGRGDTGQEGEAXXXXXDPNAIESGTIGAAAEAVTETTGSSSAESGATAGASALAILTEVLGPQLFRGGQGDRRDEEEPGNGGHDVGXXXXXXXXRMQANYGDEESEE-GRRYRRAPHPSALSPHSWMPPPPFHQYSSGSGVGGDVXXXXXXXXXXXGKGDEVLAAPSSSASSSPEILEAGQRRPGAPYTPEVEMVASPSSSWSALGGSSTTAAVTSTAAPDGEGRTDEEGGVNFRDGDASRRSAGEVTVAKASTVAPPVGEEALPKAAAESGRDDGSVGVDGAVLGSRVVAVGDEGAPPVGATVAADVLE 863
BLAST of mRNA_Ecto-sp13_S_contig643.17190.1 vs. uniprot
Match: D7FNI4_ECTSI (Predicted E3 ubiquitin ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNI4_ECTSI) HSP 1 Score: 823 bits (2125), Expect = 1.920e-287 Identity = 545/707 (77.09%), Postives = 558/707 (78.93%), Query Frame = 2
Query: 308 QICLDDRPVEAGFVLSACGHVFCRECLKAYVTSKINDAEVYPACFNVDEGFRAVEGGEKVEGSVGVGREGASGWGRRXXXXXXXXXXXXXXXXXXXXXXNGQPREEKREGCGAVISPSDIKDLIKTDAGTQRKYARFLFSREHKAARECPRCTKLSVGNPTVSLEMRCGECGCVFCYEHGGAHQGKPCAEYVEATADETNRTMALIGRMTKPCPGCQTPVEKLGGCNQMVCMHCNCSFCWICMEHVDRGTFPVHFQWWNVRGCPNQQLQEDSHHSPRGRQCHKLLSAVQIVVVGPLALLLTAASSLACVCCLPAFRLPPRQLFTGCISGWGNFVMVLPLLPVVLVGAVLAAVLYLVMLPARLFKVISRKCNSRTTSLDLTASRTPSNSRDARSGSXXXXXXXXXXXXXXXXXXXXXXXX--DPSAVESGTIGAAAEAVXXXXXXXXXXXXXXXXASALAILTEVLGPQLLRGWQEDRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----GRRYRRAPHPSALSPRSWMPPLPFHQYMSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-VASTAAPDGEG*TDEEGGVIFRDGDASRRSAGEVTVGKASAVAPPVDEEALPEAAAESGRDDGSVGVDGAVLGSRVVAVGGEGAPPVGAMVAADVLES 2407
+ICLDDRP EAGFVLSACGHVFCRECLKAYVTSKINDAE P +GF + K G G G + XXXXXXXXXXXXNGQPREEKREGCGAVI PSDIK LIKTDA TQRKYARFLFSREHK ARECPRC LSVG+P+VSLEMRCGECG VFCYEHGGAHQGK CAEYVEATADETNRTMALIGR+TKPCPGCQTPVEKLGGCNQMVCMHCNCSFCWICME VDRGTFPVHFQWWNVRGCPNQQLQEDSH SPRGRQCHKLLSAVQIVVVGPLALLLTAASSLACVCCLPAFRLPPRQLFTGCISGWGNFVMVLPLLPVVLVGAVLAAVLYLVMLPARLFKV+SRKC+SRTTSLDLTA RT SNS DARSGSXXXXXXXXXXXXXX XXX DPSA+ESGTIGAA XXXXXXXX SALAILTEVLGPQLLRGWQ D+RD XXXXXXXXXXXXXXXXXX GRRYRRAPHPS LSP SWMP XXXXXXXXXXXXXXXXXXXXXX XXXXXX V STAAPDGEG TDEEGGVIFRDGDASR SAGEVTVG+ASAVAPPVDEE LPEAAAE+GRDDGSVGVDGAVLGSRVVAVG EGAPPVGA V A VLES
Sbjct: 4 EICLDDRPAEAGFVLSACGHVFCRECLKAYVTSKINDAEFIPRALTSTKGFAPWKEERKSGVPWGWGGRGPAVGVDARGGGDLERAGXXXXXXXXXXXXNGQPREEKREGCGAVIRPSDIKVLIKTDATTQRKYARFLFSREHKTARECPRCANLSVGDPSVSLEMRCGECGYVFCYEHGGAHQGKTCAEYVEATADETNRTMALIGRITKPCPGCQTPVEKLGGCNQMVCMHCNCSFCWICMEPVDRGTFPVHFQWWNVRGCPNQQLQEDSHQSPRGRQCHKLLSAVQIVVVGPLALLLTAASSLACVCCLPAFRLPPRQLFTGCISGWGNFVMVLPLLPVVLVGAVLAAVLYLVMLPARLFKVVSRKCSSRTTSLDLTAPRTSSNSHDARSGSXXXXXXXXXXXXXXTGREGEAXXXXXDPSAIESGTIGAAXXXXXXXXXXXXGEIGAAAGVSALAILTEVLGPQLLRGWQGDQRDEEERGNGGHDEGWXXXXXXXXXXXXXXXXXXGDEESHQGRRYRRAPHPSVLSPHSWMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEILEAGRRRPGAFSIPEVEVVSSLSSSALGXXXXXXXVTSTAAPDGEGRTDEEGGVIFRDGDASRWSAGEVTVGEASAVAPPVDEEPLPEAAAEAGRDDGSVGVDGAVLGSRVVAVGDEGAPPVGATVGAYVLES 710
BLAST of mRNA_Ecto-sp13_S_contig643.17190.1 vs. uniprot
Match: A0A836CCT7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCT7_9STRA) HSP 1 Score: 261 bits (666), Expect = 1.340e-72 Identity = 148/370 (40.00%), Postives = 202/370 (54.59%), Query Frame = 2
Query: 278 TPGANRTYHCQICLD-DRPVEAGFVLSACGHVFCRECLKAYVTSKINDAEVYPACFNVDEGFRAVEGGEKVEGSVGVGREGASGWGRRXXXXXXXXXXXXXXXXXXXXXXNGQPREEKREGCGAVISPSDIKDLIKTDAGTQRKYARFLFSREHKAARECPRCTKLSVGNPTVSLEMRCGECGCVFCYEHGGAH-QGKPCAEYVEATADETNRTMALIGRMTKPCPGCQTPVEKLGGCNQMVCMHCNCSFCWICMEHVDRGTFPVHFQWWNVRGCPNQQLQEDSHHSPRGRQCHKLLSAVQIVVVGPLALLLTAASSLACVCCLPAFRLPPRQLFTGCISGWGNFVMVLPLLP-VVLVGAVLAAVLYLVM 1378
TPG + Y+CQIC + R +A F LSACGH FC C++ Y++ K+ D + YP CF V +GG R GA XXXXXXXXX CG I+ +DI +L+ T+ T KY F S+E+ AR C +C++ + G+P + M C CG +C+EHG AH CA Y + A+E+ + AL+ T+PCPGC + +EK GGCNQM C +C FCW+C+ VD G P HF+WWNV GCPNQQ+QED+ R R C ++LS +Q+V++GP LP F P ++F+GC+SGWG VM L LLP V+ +G + +L L M
Sbjct: 75 TPGGSDLYYCQICFEYARRGDAAFTLSACGHTFCHACVREYISKKVVDGQTYPICFLVTSSDGPAQGG----------RGGAX------------------XXXXXXXXXXXXXXXXXXSACGQSIAEADIYELLSTEPVTLAKYQWFKLSKENSNARSCSKCSEAAFGDPQ-NPSMTCPRCGHRYCFEHGDAHGPATTCAAYELSMAEESKKNRALLSETTRPCPGCASAIEKAGGCNQMKCYNCGTHFCWLCLRKVDGGALPRHFEWWNVTGCPNQQMQEDAQPGRRSRVCLRVLSLIQVVIIGPXXXXXXXXXXXXXXXXLPLFGQGPVEVFSGCMSGWGYVVMALLLLPFVIAIGVPILLILGLCM 415
BLAST of mRNA_Ecto-sp13_S_contig643.17190.1 vs. uniprot
Match: A0A6G0WWH6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WWH6_9STRA) HSP 1 Score: 227 bits (578), Expect = 1.620e-61 Identity = 130/341 (38.12%), Postives = 159/341 (46.63%), Query Frame = 2
Query: 296 TYHCQICLDDRPVEAGFVLSACGHVFCRECLKAYVTSKINDAEVYPACFNVDEGFRAVEGGEKVEGSVGVGREGASGWGRRXXXXXXXXXXXXXXXXXXXXXXNGQPREEKREGCGAVISPSDIKDLIKTDAGTQRKYARFLFSREHKAARECPRCTKLSVGNPTVSLEMRCGECGCVFCYEHGGAHQGKPCAEYVEATADETNRTMALIGRMTKPCPGCQTPVEKLGGCNQMVCMHCNCSFCWICMEHVDRGTFPVHFQWWNVRGCPNQQLQEDSHHSPR--GRQCHKLLSAVQIVVVGPLALLLTAASSLACVCCLPAF---RLPPRQLFTGC--ISGW 1297
TY+CQICL+ + F L CGH FC C+K Y+ SKI D VYP CF +D E C A I DI+ L +DA T KY +F F +E+ AARECP C + VG+ T + C C FC+ H AH G CAEY A E A+I +++KPCPGCQTPVEK GGCNQM C+ C +FCW+C + VD G FP HFQWWN+ GC Q+ E S P + L +V GP AL LT A S CC+P R R F GC +SGW
Sbjct: 134 TYYCQICLEYVDIATTFALDGCGHRFCVGCIKDYLASKIQDGLVYPKCFYLDP-----------------------------------------------------------EPCNAKIEVDDIRALA-SDA-TWEKYEKFKFFKENAAARECPYCHHVQVGSGTEDPMINCAACSQEFCFTHSNAHPGTSCAEYEAARRAEEKLNQAMISQISKPCPGCQTPVEKSGGCNQMKCITCGVNFCWLCGKEVDSGVFPEHFQWWNLAGCAGSQMSESSTGKPSLFFKLTWFLFRLFLCLVFGPPALALTLAFSAVACCCIPCLNNSRETARSAFLGCFCVSGW 413
BLAST of mRNA_Ecto-sp13_S_contig643.17190.1 vs. uniprot
Match: A0A485LI31_9STRA (Aste57867_21164 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LI31_9STRA) HSP 1 Score: 225 bits (573), Expect = 1.280e-60 Identity = 132/360 (36.67%), Postives = 164/360 (45.56%), Query Frame = 2
Query: 296 TYHCQICLDDRPVEAGFVLSACGHVFCRECLKAYVTSKINDAEVYPACFNVDEGFRAVEGGEKVEGSVGVGREGASGWGRRXXXXXXXXXXXXXXXXXXXXXXNGQPREEKREGCGAVISPSDIKDLIKTDAGTQRKYARFLFSREHKAARECPRCTKLSVGNPTVSLEMRCGECGCVFCYEHGGAHQGKPCAEYVEATADETNRTMALIGRMTKPCPGCQTPVEKLGGCNQMVCMHCNCSFCWICMEHVDRGTFPVHFQWWNVRGCPNQQLQEDSHHSPRGRQCHKLLSAVQIVVVGPLALLLTAASSLACVCCLPAF---RLPPRQLFTGC--ISGWGNF-----VMVLPLLPVVLVG 1345
T +CQICL+ + A L ACGH FC C++ Y+ SKI D VYP CF E + C A I +DI+ L T A KY +F FS+EH ARECP C + VG + M C CG FC+ H AH G CA Y +A E A I ++ KPCPGCQTPVEK GGCNQM C+ C +FCW+C + VD G FP HFQWWN+ GC Q+ E + S + V +V P AL LT S+ CC+P F R R F GC +SGW V+ LP +P L+G
Sbjct: 155 TVYCQICLEYVDIAATCALDACGHRFCVACMEMYLASKIQDGLVYPKCFFA----------------------------------------------------------EAHDTCDASIDAADIRAL--TSAVLFDKYEKFKFSKEHTGARECPFCHVVQVGGGAENPAMTCVHCGHEFCFSHSNAHMGSTCAAYEKARRAEEKLNQAKISQIAKPCPGCQTPVEKSGGCNQMKCITCGVNFCWLCGQEVDGGVFPEHFQWWNLAGCAGAQMSESTTPSLLAKVTWFCFRLVLCLVFAPPALALTLVCSIVSCCCIPCFANGRGTARSAFLGCFCVSGWVFMAPIVLVLALPFVPFYLMG 454
BLAST of mRNA_Ecto-sp13_S_contig643.17190.1 vs. uniprot
Match: K8Z7H4_NANGC (Ring-finger-containing e3 ubiquitin (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z7H4_NANGC) HSP 1 Score: 218 bits (555), Expect = 2.410e-59 Identity = 130/353 (36.83%), Postives = 171/353 (48.44%), Query Frame = 2
Query: 305 CQICLDDRPVEAGFVLSACGHVFCRECLKAYVTSKINDAEVYPACFNVDEGFRAVEGGEKVEGSVGVGREGASGWGRRXXXXXXXXXXXXXXXXXXXXXXNGQPREEKREGCGAVISPSDIKDLIKTDAGTQRKYARFLFSREHKAARECPRCTKLSVGNPTVSLEMRCGECGCVFCYEHGGAHQGKPCAEYVEATADETNRTMALIGRMTKPCPGCQTPVEKLGGCNQMVCMHCNCSFCWICMEHVDRGTFPVHFQWWNV-RGCPNQQLQEDSHHSPRGR-QCHKLLSAVQIVVVGPLALLLTAASSLACVCCLPAFRLPP---------------RQL---FTGCISGWGN 1303
CQ+C + V + L ACGH +CR C +Y+ KI++ +++P CF +E R GRE GRR PR C + SD+ L+ + T KY RF F + H+ AR CP C +G+ M C +CG FCY H AH K C EY + T +ET R A+I + KPCPGC PVEK GGCNQM C+ C ++CW+C + VD GTFP HFQWWNV GCPN Q+QED P + K LS +Q++ +GP A ++ +AC C F+ RQL +TGCIS WGN
Sbjct: 83 CQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGR-------------TGRE-----GRRYRTI---------------------PRP-----CATPVLESDMYTLVCPE--TWLKYERFKFQKAHRNARMCPFCDSAELGDAEQPA-MTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCF-LFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGN 387
BLAST of mRNA_Ecto-sp13_S_contig643.17190.1 vs. uniprot
Match: A0A067C6H3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C6H3_SAPPC) HSP 1 Score: 218 bits (556), Expect = 4.000e-59 Identity = 137/365 (37.53%), Postives = 169/365 (46.30%), Query Frame = 2
Query: 284 GANRTYHCQICLDDRPVEAGFVLSACGHVFCRECLKAYVTSKINDAEVYPACFNVDEGFRAVEGGEKVEGSVGVGREGASGWGRRXXXXXXXXXXXXXXXXXXXXXXNGQPREEKREGCGAVISPSDIKDLIKTDAGTQRKYARFLFSREHKAARECPRCTKLSVGNPTVSLEMRCGECGCVFCYEHGGAHQGKPCAEYVEATADETNRTMALIGRMTKPCPGCQTPVEKLGGCNQMVCMHCNCSFCWICMEHVDRGTFPVHFQWWNVRGCPNQQLQEDSHHSPRGRQCHKLLS--AVQIVVVGPLALLLTAASSLACVCCLP------AFRLPPRQLFTGC--ISGWG---NFVMV--LPLLPV 1333
G T +CQICL+ V + LS CGH FC +C+ Y+ SKI+D V P CF D +G+P C A+I PSDI+ L+ TD KY +F F + H ARECP C L VGN M C +CG FCY H AH C EY E A I +++KPCPGC++PVEK GGCNQM C+ C FCW+C E VD G FP HFQWWN+RGC Q+ E + P S + +V GP AL LT A S+ CC+P AF R F C +SG+ FV+ LPLLPV
Sbjct: 47 GMAETSYCQICLEYVDVASTVALSVCGHRFCADCIHGYLASKISDGLVAPKCFFAD--------------------------------------------------GDGRP-------CEALIPPSDIQALVSTDVF--EKYEKFNFIKAHAGARECPHCHVLQVGNGPDDPHMDCTQCGEAFCYTHSNAHPHSTCLEYEAKMRAEDKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWNLRGCAGAQMSETAVEGPSTLSKMVAFSWRILLCLVFGPPALALTLAFSILGCCCIPCCLRGQAFA---RSAFASCFCVSGYALMSPFVLAACLPLLPV 349
BLAST of mRNA_Ecto-sp13_S_contig643.17190.1 vs. uniprot
Match: W4GYV0_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GYV0_9STRA) HSP 1 Score: 219 bits (557), Expect = 3.370e-58 Identity = 142/368 (38.59%), Postives = 174/368 (47.28%), Query Frame = 2
Query: 296 TYHCQICLDDRPVEAGFVLSACGHVFCRECLKAYVTSKINDAEVYPACFNVDEGFRAVEGGEKVEGSVGVGREGASGWGRRXXXXXXXXXXXXXXXXXXXXXXNGQPREEKREGCGAVISPSDIKDLIKTDAGTQRKYARFLFSREHKAARECPRCTKLSVG---NPTVSLEMRCGECGCVFCYEHGGAHQGKPCAEYVEATADETNRTMALIGRMTKPCPGCQTPVEKLGGCNQMVCMHCNCSFCWICMEHVDRGTFPVHFQWWNVRGCPNQQLQEDSHHSPRGRQCHK----LLSAVQIVVVGPLALLLT-AASSLACVC--CLPAFRLPPRQLFTGC--ISGWGNFVMV-----LPLLPVVLVGA 1348
T +CQICL+ V L ACGH FC ECL+ YVTSKI D VYP CF F +GG C A I +D++ LI T KY +F F++EH ARECP C + V NPT+S C C V+C+ H AH G CA+Y +A E A I ++ K CPGC++PVEK GGCNQM C+ C +FCW+C + V G FP HFQWWN+ GC Q+ E + P HK L V+ GP AL+LT A S+LAC C CL + R F GC ISGW V V LP LP VLV +
Sbjct: 165 TCYCQICLEYVDVATTIALDACGHRFCIECLEGYVTSKITDGMVYPTCFFA---FPPEDGGAVPS------------------------------------------------TCHAAIQATDLRALI-TSEDVWAKYEKFKFNKEHANARECPHCHHVQVSAAANPTIS----CDACRQVYCFSHSNAHPGMSCADYEKARRAEDKLNHAKISQIAKFCPGCKSPVEKSGGCNQMKCITCGINFCWLCGQEVGDGVFPEHFQWWNLAGCAGAQMSEAATRKPSF--AHKAMMFLFRLALCVIFGPPALVLTLACSALACCCVPCLISDRDSAMSAFLGCFCISGWVFMVPVVIVLALPFLPFVLVAS 474
BLAST of mRNA_Ecto-sp13_S_contig643.17190.1 vs. uniprot
Match: W7UAK3_9STRA (Ring-finger-containing e3 ubiquitin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAK3_9STRA) HSP 1 Score: 220 bits (560), Expect = 4.070e-57 Identity = 132/362 (36.46%), Postives = 176/362 (48.62%), Query Frame = 2
Query: 305 CQICLDDRPVEAGFVLSACGHVFCRECLKAYVTSKINDAEVYPACFNVDEGFRAVEGGEKVEGSVGVGREGASGWGRRXXXXXXXXXXXXXXXXXXXXXXNGQPREEKREGCGAVISPSDIKDLIKTDAGTQRKYARFLFSREHKAARECPRCTKLSVGNPTVSLEMRCGECGCVFCYEHGGAHQGKPCAEYVEATADETNRTMALIGRMTKPCPGCQTPVEKLGGCNQMVCMHCNCSFCWICMEHVDRGTFPVHFQWWNV-RGCPNQQLQEDSHHSPRGR-QCHKLLSAVQIVVVGPLALLLTAASSLACVCCLPAFRLPP---------------RQL---FTGCISGWGNFVMVLPLLP 1330
CQ+C + V + L ACGH +CR C +Y+ KI++ +++P CF +E R GRE GRR PR C + SD+ L+ + T KY RF F + H+ AR CP C +G+ M C +CG FCY H AH K C EY + T +ET R A+I + KPCPGC PVEK GGCNQM C+ C ++CW+C + VD GTFP HFQWWNV GCPN Q+QED P + K LS +Q++ +GP A ++ +AC C F+ RQL +TGCIS WGN ++ L+P
Sbjct: 213 CQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGR-------------TGRE-----GRRYRTI---------------------PRP-----CATPVLESDMYTLVCPE--TWLKYERFKFQKAHRNARMCPFCDSAELGDAEQPA-MTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCF-LFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGNTLVAFLLIP 526
BLAST of mRNA_Ecto-sp13_S_contig643.17190.1 vs. uniprot
Match: A0A024U4E2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4E2_9STRA) HSP 1 Score: 215 bits (547), Expect = 9.820e-57 Identity = 129/367 (35.15%), Postives = 172/367 (46.87%), Query Frame = 2
Query: 284 GANRTYHCQICLDDRPVEAGFVLSACGHVFCRECLKAYVTSKINDAEVYPACFNVDEGFRAVEGGEKVEGSVGVGREGASGWGRRXXXXXXXXXXXXXXXXXXXXXXNGQPREEKREGCGAVISPSDIKDLIKTDAGTQRKYARFLFSREHKAARECPRCTKLSVG-NPTVSLEMRCGECGCVFCYEHGGAHQGKPCAEYVEATADETNRTMALIGRMTKPCPGCQTPVEKLGGCNQMVCMHCNCSFCWICMEHVDRGTFPVHFQWWNVRGCPNQQLQEDSHHSPR--GRQCHKLLSAVQIVVVGPLALLLTAASSLACVCCLPAF---RLPPRQLFTGC--ISGW-----GNFVMVLPLLPVVLVG 1345
G T +CQICL+ V + +L+ACGH FC EC++ YV SKI D VYP CF F + + + ++ C A I P+D++ +I +D KY +F F++EH ARECP C + V V + C EC V+C+ H AH G C EY ++ E A I ++ K CPGC++PVEK GGCNQM C+ C FCW+C + VD G FP HFQWWN+ GC Q+ E + P + L V +V GP A L+ A S+ CC+P R + F GC ISGW V+ LP LP LV
Sbjct: 158 GYTETCYCQICLEYVDVASTIMLNACGHRFCIECMEGYVASKITDGLVYPTCF-----FTSPPSDDGSDSAIPT-------------------------------------------TCHAAIHPTDLRAVISSDE-VWSKYEKFKFNKEHANARECPFCHHVQVSATAAVDPAITCDECHEVYCFSHSSAHPGTSCVEYEKSRRAEEKLNQAKISQIAKLCPGCKSPVEKSGGCNQMKCITCGIHFCWLCGKQVDDGVFPEHFQWWNLAGCAGAQMSESTAGQPSMLNKISWFLFRLVLCIVFGPPAFLMAIAFSIIGCCCIPCCMTSRETGQSTFLGCFCISGWVLMVPAALVLALPFLPFGLVA 475 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig643.17190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig643.17190.1 >prot_Ecto-sp13_S_contig643.17190.1 ID=prot_Ecto-sp13_S_contig643.17190.1|Name=mRNA_Ecto-sp13_S_contig643.17190.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=633bp MYLGAESTATPGANRTYHCQICLDDRPVEAGFVLSACGHVFCRECLKAYVback to top mRNA from alignment at Ecto-sp13_S_contig643:16517..23036+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig643.17190.1 ID=mRNA_Ecto-sp13_S_contig643.17190.1|Name=mRNA_Ecto-sp13_S_contig643.17190.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6520bp|location=Sequence derived from alignment at Ecto-sp13_S_contig643:16517..23036+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig643:16517..23036+ >mRNA_Ecto-sp13_S_contig643.17190.1 ID=mRNA_Ecto-sp13_S_contig643.17190.1|Name=mRNA_Ecto-sp13_S_contig643.17190.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1899bp|location=Sequence derived from alignment at Ecto-sp13_S_contig643:16517..23036+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |