mRNA_Ecto-sp13_S_contig643.17188.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig643.17188.1 vs. uniprot
Match: A0A6H5L606_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L606_9PHAE) HSP 1 Score: 1031 bits (2667), Expect = 0.000e+0 Identity = 527/554 (95.13%), Postives = 531/554 (95.85%), Query Frame = 2
Query: 233 MGGSLSEGLLLALILYPFNIFKAAAFVHPKATFGWSSWTYDQSRRLQQPICCGEPGPSSSC---RRPRQRGERSCNKGVRMQADATDMETQVPGAASSSLTQFDNRESAEVDSFMGELNFCLGPSDSVLSGPSLLKDLNTATNKIVKNLLILNSPEDSEPAMRDALKIEADFDAQHSESPQYSAAKAYLSCVRQLAIEGCPAVETLDALSEVYKRAFRRVAGVLSDFGCTITPGDESGGRIRPVDKDICLSILDYAVSAREQEGTTPTRALNTLVNRVVRTVCVGSDEDLQALAREMESKHNKFMTKCFGKGSWQGTQEDMFYDALINLVKHGLTDEGVPALSGAYLNSYQRLMGILVQEVGTRSTPASEMVLKSFLAWEREIRKELTEPAWKSRPPDLVGSWALDTSGWDGLTDLPVDSSAAGGGTTDGMVDLGLSDLVVSFRKDGTVQIPVEKGVGLQWRVEPGPTHLDTIYFEMIPAAPKVKASSKAGAGGGTTLSYTGYVDRGARIEARFSKRFLKMTGRMTSVERGQERPSTRFAMRLVARGEGNGLLE 1885
MGGSLSEGLLLA L PFN FKAAAFVH KATFGWSSWT+DQSR LQQP CCGEP SSS RRPRQRG R CNKGV MQADATDMETQVPGAASSSLTQFDNRESAE+DSFMGELNFCLGPSDSVLSGPSLLKDLNTATNKIVKNLLILNSPEDSEPAMRDALKIEA+FDAQHSESPQYSAAKAYLSCVRQLAIEGCPAVETLDALSEVYKRAFRRVAGVLSDFGCTI PGDESGGRIRPVDKDICLSILDYAV AREQEGTTPTRALNTLVNRVVRTVCVGSDEDLQALAREMESKH KFMTKCFGKGSWQGTQEDMFY ALINLVKHGLTDEGVPALSGAYLNSY+RLMGILVQEVGTRSTPASEMVLKSFLAWEREIRKELTEPAWKSRPPDLVGSWALDTSGWDGLTDLPVDSSAAGGGTTDGMVDLGLSDLVVSF KDGTVQIPVEKGVGLQWRVEPGPTHLDTIYFEMIPAAPKVKASSKAGAGGGTTLSYTGYVDRGARIEARFSKRFLKMTGRMTSVERGQERPSTRFAMRLVARGE GLLE
Sbjct: 1 MGGSLSEGLLLAFTLCPFNSFKAAAFVHSKATFGWSSWTHDQSRLLQQPTCCGEPSRSSSSSSGRRPRQRGGRYCNKGVWMQADATDMETQVPGAASSSLTQFDNRESAEIDSFMGELNFCLGPSDSVLSGPSLLKDLNTATNKIVKNLLILNSPEDSEPAMRDALKIEAEFDAQHSESPQYSAAKAYLSCVRQLAIEGCPAVETLDALSEVYKRAFRRVAGVLSDFGCTIAPGDESGGRIRPVDKDICLSILDYAVPAREQEGTTPTRALNTLVNRVVRTVCVGSDEDLQALAREMESKHTKFMTKCFGKGSWQGTQEDMFYHALINLVKHGLTDEGVPALSGAYLNSYERLMGILVQEVGTRSTPASEMVLKSFLAWEREIRKELTEPAWKSRPPDLVGSWALDTSGWDGLTDLPVDSSAAGGGTTDGMVDLGLSDLVVSFLKDGTVQIPVEKGVGLQWRVEPGPTHLDTIYFEMIPAAPKVKASSKAGAGGGTTLSYTGYVDRGARIEARFSKRFLKMTGRMTSVERGQERPSTRFAMRLVARGERIGLLE 554
BLAST of mRNA_Ecto-sp13_S_contig643.17188.1 vs. uniprot
Match: A0A836CDA0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDA0_9STRA) HSP 1 Score: 360 bits (924), Expect = 4.360e-115 Identity = 217/453 (47.90%), Postives = 276/453 (60.93%), Query Frame = 2
Query: 554 VDSFMGELNFCLGPSDSVLSGPSLLKDLN---------TATNKIVKNLLILNSPEDSEPAMRDALKIEADFDAQHSESPQYSAAKAYLSCVRQLAIEGCPAVE--TLDALSEVYKRAFRRVAGVLSDFGCT-ITPGDESGGRIRPVDKDICLSILDYAVSAREQEGTTPTRALNTLVNRVVRTVCVGSDEDLQALAREMESKHNKFMTKCFGK---GSWQGTQEDMFYDALINLVKHGLTDEGVPALSGAYLNSYQRLMGILVQEVGTRSTPASEMVLKSFLAWEREIRKELTEPAWKSRPPDLVGSWALDTSGWDGLTDLPVDSSAAGGGTTDGMVDLGLSDLV-VSFRKDGTVQIPVEKGV-GLQWRVEPGPTHLDTIYFEMIPAAPKVKASSKAGAGGGTTLSYTGYVDRGARIEARFSKRFLKMTGRMTSVERGQERPSTRFAMRLVAR 1861
V + E +FCL DS LSGPS+ K LN T TN ++KN+LILNSPED PA R+ + F+ ++ P Y+ A+AYL V L + G PA LDAL+ Y +A+RRV VL DFGC + PG + GR P D DICLS+LD V EG T T+ALN L NRVVRT+CVG+D+DL LAREM SK FMTK G G W+G+QED++Y ALI L+ +GLT G L + N+Y R++ LV+E+G R TPAS VL SF+ WE E+R+ L W P DLVG WA+ D + LP + A + ++ V ++DG+ +IP V GL+WR++PGPTHLDT+ FE+ AA G G LSYTGYVDRGARIEARFS+R LKMTGR+T V RG++RPSTRF+MRLV R
Sbjct: 9 VAQYFDEFDFCLDSMDSALSGPSMTKALNRQVEVHPNLTKTNILIKNVLILNSPEDHGPAERELTGLLGKFETAYATEPGYAEARAYLDAVCALGLPG-PAASPAALDALAPNYMQAYRRVLSVLGDFGCAPLAPG--AAGRAAPADADICLSVLDAIV-----EGHTKTKALNALSNRVVRTMCVGNDDDLACLAREMGSKRTAFMTKWVGGAQGGEWEGSQEDVYYQALIELLSNGLT-AGARGLRNPWANAYARVVAALVRELGARRTPASSRVLTSFVTWESELRRTLRSAGWDENPLDLVGVWAVG----DDMDLLPDYAPVAALSSXXXXXXXXXXXMLRVMLKRDGSAEIPDNGRVKGLRWRLDPGPTHLDTLRFEVRQAA---GGGDALGGEEGALLSYTGYVDRGARIEARFSRRPLKMTGRLTRVVRGEQRPSTRFSMRLVER 445
BLAST of mRNA_Ecto-sp13_S_contig643.17188.1 vs. uniprot
Match: W7T252_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T252_9STRA) HSP 1 Score: 216 bits (550), Expect = 1.450e-58 Identity = 166/468 (35.47%), Postives = 228/468 (48.72%), Query Frame = 2
Query: 563 FMGELNFCLG-PS-DSVLSGPS---LLKDLNTATNKIVKNLLILNSPEDSEPAMRDALKIEADF----DAQHSESPQYSAAKAYLSCVRQLAIEGCPAVE---TLDALSEVYKRAFRRVAGVLSDFGCTITPGDESGG-------------RIRPVDKDICLSILDYAVSAREQEGTTPTRALNTLVNRVVRTVCVGSDEDLQALAREMESKHNKFMTKCFGKGSWQGTQEDMFYDALINLVKHGLTDEGVPALSGAYLNSYQRLMGILVQEVGTRSTPASEMVLKSFLAWEREIRKELTEPAWKSRPPDLVGSWALDTSGWD--GLTDLPVDSSAAGGGTTDGMVDLGLSDLVVSFRKDGTVQIPVEKGVGLQWRVEPGPTHLDTIYFEMIPAAPKVKASSKAGAGGGTTLSYTGYVDRGARIEARFSKRFLKMTGRMTSVERGQERPSTRFAMRLVARGEGNGLLE 1885
F E++FCL PS + V G S + K +NT N+ K +LI E A ++ DF +A + A A++ V +A+ C +E T AL Y +A+ RV L C + D S ++RP D+DICLS+ D A T T+ LNT+ NRV RT+ ++D+ L E+ F+ K G +G E ++Y ALI + GL A+ G Y N+YQR LVQE+GTRS + +F+ WE +RK LT+ W P +L G W L SG + G T LP G G G + ++LV FR+DGT+++P E G+ W EPGPTHLDTI FE+ P + L YTGYVDRG RIE RFSKR +KM GR+ RG+ R S +F+M+L + N LLE
Sbjct: 138 FEEEIDFCLAAPSLEGVSVGNSRVEIAKVVNTFVNQAAKKILIGFDCCFGEVADGVKDRLRTDFLSGDEASAEDRTCVEGACAFIDAV--VALSPCSDLEVNATKGALVPPYTQAYARVLDTLLSNDCELRHSDSSALSTTASTDPPSPPLKVRPRDRDICLSLYDTITGA-----PTKTKVLNTISNRVSRTMLYADEDDVAKLTNELTKGKPGFLEKWVG--GEEGCDEAVYYGALIAYLTGGLEAPAPAAMGGGYSNAYQRFTTSLVQELGTRSASVDPEMFDAFVRWESTLRKNLTQDMWDRHPKELTGQWTLVDSGPNPAGATTLP------GPGAETGKGEQRSANLV--FRRDGTLRVPPELGMDGTWSFEPGPTHLDTIRFELRQGTPDNRV-----------LCYTGYVDRGQRIETRFSKRPIKMKGRVVLRARGEARSSGKFSMQLCKK---NTLLE 574
BLAST of mRNA_Ecto-sp13_S_contig643.17188.1 vs. uniprot
Match: A0A4D9CMD2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CMD2_9STRA) HSP 1 Score: 206 bits (525), Expect = 3.970e-55 Identity = 128/317 (40.38%), Postives = 171/317 (53.94%), Query Frame = 2
Query: 941 RIRPVDKDICLSILDYAVSAREQEGTTPTRALNTLVNRVVRTVCVGSDEDLQALAREMESKHNKFMTKCFGKGSWQGTQEDMFYDALINLVKHGLTDEGVPALSGAYLNSYQRLMGILVQEVGTRSTPASEMVLKSFLAWEREIRKELTEPAWKSRPPDLVGSWALDTSGWD--GLTDLPVDSSAAGGGTTDGMVDLGLSDLVVSFRKDGTVQIPVEKGVGLQWRVEPGPTHLDTIYFEMIPAAPKVKASSKAGAGGGTTLSYTGYVDRGARIEARFSKRFLKMTGRMTSVERGQERPSTRFAMRLVARGEGNGLLE 1885
++RP D+DICLS+ D A T T+ LNT+ NRV RT+ G ++D+ L E+ F+ K G +G E ++Y ALI + GL A+ G Y N+YQR LVQE+GTRS + +F+ WE +RK LT+ W P +L G W L SG + G T LP G G G + ++LV FR+DGT+++P E G+ W EPGPTHLDTI FE+ P + L YTGYVDRG RIE RFSKR +KM GR+ RG+ R S +F+M+L + N LLE
Sbjct: 275 KVRPRDRDICLSLYDTITGA-----PTKTKVLNTISNRVSRTMLYGDEDDVAKLTDELTKGKPGFLEKWVGGD--EGCDEAVYYGALIAYLTGGLEAPAPAAMGGGYSNAYQRFTTSLVQELGTRSASVDPEMFDAFVRWESTLRKNLTQDMWDRHPKELTGQWTLVDSGPNPAGATTLP------GSGAETGKGEQRSANLV--FRRDGTLRVPPELGMDGTWSFEPGPTHLDTIRFELRQGTPDNRV-----------LCYTGYVDRGQRIETRFSKRPIKMKGRVVLRARGEARSSGKFSMQLCKK---NTLLE 562
BLAST of mRNA_Ecto-sp13_S_contig643.17188.1 vs. uniprot
Match: A0A7S2UV57_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV57_9STRA) HSP 1 Score: 198 bits (503), Expect = 3.350e-54 Identity = 119/357 (33.33%), Postives = 185/357 (51.82%), Query Frame = 2
Query: 842 DALSEVYKRAFRRVAGVLSDFGCTITPGDESGG-----RIRPVDKDICLSILDYAVSAREQEGTTPTRALNTLVNRVVRTVCVGSDEDLQALAREMESKHNKFMTKCFGKGSWQ---GTQEDMFYDALINLVKHG-------LTDEG-------VPALSGAYLNSYQRLMGILVQEVGTRSTPASEMVLKSFLAWEREIRKELTEPAWKSRPPDLVGSWALDTSGWDGLTDLPVDSSAAGGGTTDGMVDLGLSDLVVSFRKDGTVQIPVEKGVGLQWRVEPGPTHLDTIYFEMIPAAPKVKASSKAGAGGGTTLSYTGYVDRGARIEARFSKRFLKMTGRMTSVERGQERPSTRFAM 1846
+ LS YK + R+ + +D GC I + +R VD+D CLS+ DYA + T ++ LN + N+V R + GSD+D++ALA +++ + WQ +QE +FY+A+++L++ G LT + V L G+YLNS++RL+ +LV+ +GT + S VLK F WE ++RK +TEP W + P +L G W L D D P D ++ +V DGTV++ E G G++W +EPGPTHLDT+ F++ + T L+Y GY+DRG R+E +FSK+ ++M GR+ + RG R +T F M
Sbjct: 26 EKLSAFYKESLVRILRITADAGCDIDMVQDDANPVQDITVRSVDRDFCLSVADYANPTQ----ATVSKDLNRVANKVARVISYGSDQDIKALAVSLQADLTTLTQE------WQLAADSQEKVFYEAMLSLLRDGFDGAKSYLTSDSSLRVHNAVAKLKGSYLNSFERLVSLLVETIGTGAGITSSEVLKGFSTWETQVRKNVTEPRWDALPKELTGPWMLMEG--DAAMDFPG-------------YDTEINQQIVYLNPDGTVKVDSESGEGIEWSLEPGPTHLDTVRFQVRAFGTGPEE---------TILNYVGYIDRGQRLETKFSKQPVRMKGRLITTFRGNVRSTTAFRM 348
BLAST of mRNA_Ecto-sp13_S_contig643.17188.1 vs. uniprot
Match: A0A7R9UG48_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UG48_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.590e-32 Identity = 111/383 (28.98%), Postives = 184/383 (48.04%), Query Frame = 2
Query: 776 AKAYLSCVRQLAIEGCPAVETLDAL--SEVYKRAFRRVAGVLSDFGCTITPGDESGGRIRPVDKDICLSILDYAVSAREQEGTTPTRALNTLVNRVVRTVCVGSDEDLQALAREMESKHNKFMTKCFGKGSWQGTQEDM---------FYDALINLVKHGLT-----DEGVPALSGAYLNSYQRLMGILVQEVGTRSTPASEM---VLKSFLAWEREIRKELTEP-AWKSRPPDLVGSWALDTSGWDGLTDLPVDSSAAGGGTTDGMVDLG-LSDLVVSFRKDGTVQIPVEKGVG--LQWRVEPGPTHLDTIYFEMIPAAPKVKASSKAGAGGGTTLSYTGYVDRGARIEARFSKRFLKMTGRMTSVER---GQERPSTRFAM 1846
A+ + CV + G E +L ++VY R + + L GCT+ D S + D +IC S+ D V ++ + T+ LN+L N V R + G++ED +A ++ + + F+ + + G + T+ D FYDA+I+L + G+ +E A S + N+ QRL+G+LVQE+G R A + + F++WE ++R+ +T W P DL G+W+L + +S A + +G S + + F DG + + G W + PGPTHLDT ++ S++ + L +TGY+DRG R+E +FSKR + M+GR+T R G RP RF++
Sbjct: 124 AEQLVGCVFHVLDTGTEEKEKAGSLKPTQVYSRMYNQFYQALVVAGCTL---DGSDTALVARDYNICFSMGDILVGPEDEGPPSKTQFLNSLANNVARVLINGAEEDGILMAERLKEQRDTFL-RDYQLGDFADTRIDKSTTESDSVWFYDAMIDLCETGMATAIAQEEAARARSFCWANALQRLLGLLVQEMGLRLEGAESIEDPIFTRFVSWESQLRRNITSNYGWNKHPRDLQGTWSLSS----------FTTSYARTSQSSAEQQIGDASTMRLVFEADGKGTVSMSSGTNQPFAWSLSPGPTHLDTC---------NIRISTQDDS---ADLFFTGYIDRGQRLETKFSKRPVLMSGRVTRRRRDGTGVARPMGRFSL 480
BLAST of mRNA_Ecto-sp13_S_contig643.17188.1 vs. uniprot
Match: A0A6U4GLT9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4GLT9_9STRA) HSP 1 Score: 140 bits (353), Expect = 4.890e-32 Identity = 116/384 (30.21%), Postives = 180/384 (46.88%), Query Frame = 2
Query: 776 AKAYLSCVRQLAIEGCPAVETLDALS---EVYKRAFRRVAGVLSDFGCTITPGDESGGRIRPVDKDICLSILDYAVSAREQEGTTPTRALNTLVNRVVRTVCVGSDEDLQALAREMESKHNKFMTKCFGKGSWQGTQED---MFYDALINLVKHGLT-----DEGVPALSGAYLNSYQRLMGILVQEVGTR---STPASEMVLKSFLAWEREIRKELT-EPAWKSRPPDLVGSWALDTSGWDGLTDLPVDSSAAGGGTTDGMVDLGLSDLVVS--FRKDG--TVQIPVEKGVGLQWRVEPGPTHLDTIYFEMIPAAPKVKASSKAGAGGGTTLSYTGYVDRGARIEARFSKRFLKMTGRMTSVER---GQERPSTRFAMRLVAR 1861
A+ +LSC+ + G E AL + Y + R L GC++ D S + P D +IC S+ D E+ TT + LN + N V R + G+DED +A ++++ F+ G+ +GT E FYDAL++L + G+ +E + + NS QR++G+LVQE+G R S + + F+ WE E+R+ +T W P DL G+W L + A TT +LG V F DG TV+ + L+W + PGPTHLDT ++ +S A L +TGY+DRG R+E + S R ++M+GR+ + G +RP +FAM + A+
Sbjct: 145 AEIFLSCLLHVVDNGGEDEEKAAALQRRIQPYSPLYMRFTNALRVAGCSL---DRSAEALDPKDYNICFSMGDAFTPPGEKPTTT--QYLNRVANDVARVLINGADEDAAGMAAGLKAQRQGFLNDYGLAGAEEGTPESDIAWFYDALVDLCESGMATAVALEESSYGRAFCWANSMQRILGLLVQEMGLRLEGSETLEDPIFTRFVNWESELRQNITGNYGWDPTPKDLEGTWCLG-------------AFATSYTTTSMPAELGGEACRVRLLFASDGKGTVKSLSGPDLPLRWSLSPGPTHLDTCSIQI--------GTSDDNA----DLFFTGYIDRGQRLETKLSGRSVRMSGRVVRRRKDRLGVDRPMGKFAMTMDAK 498
BLAST of mRNA_Ecto-sp13_S_contig643.17188.1 vs. uniprot
Match: A0A7S2SL04_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SL04_9STRA) HSP 1 Score: 135 bits (341), Expect = 4.620e-30 Identity = 126/421 (29.93%), Postives = 184/421 (43.71%), Query Frame = 2
Query: 752 SESPQYSAAKAYLSC-VRQLAIEGCPAVETLDAL--SEVYKRAFRRVAG---------VLSDFGCTITPGDE-------SGGRIRPVDKDICLSILDY---------AVS----------------------AREQEGTTPTRALNTLVNRVVRTVCVGSDEDLQALAREMESKHNKFMTKCFGKGSWQGTQEDMFYDALINLVKHGLTDEGVPALSGAYLNSYQRLMGILVQEVGT----RSTPASEMVLKSFLAWEREIRKELTEPAWKSRPPDLVGSWALDTSGWDGLTDLPVDSSAAGGGTTDGMVDLGLSDLVVSFRKDGTVQIPVEKGVGLQWRVEPGPTHLDTIYFEMIPAAPKVKASSKAGAGGGTTLSYTGYVDRGARIEARFSKRFLKMTGRMTSVERGQERPST--RFAM 1846
+E + A AY C V LA+E P V L +E Y A R + G V + ++P D SG P D DICLS +D AV+ A E TT T+ LN L N V RTV GS+ D+ L M F +W ++ A+ +L++ GL L +YL+++QRL+ +VQE+GT R +L F WERE+R +T W+ P D++G W L S D + SS G +G + V+ + DG V + +G G+ WR++PGPTHLDT Y I A + ++ + T+++ GY+DRG R+E+R S R ++M+G + S + P T RF M
Sbjct: 193 AEEADFDAGLAYFDCMVSLLALEESPKVNALAGTRYAEAYD-ALRSLLGANGMKFRVEVAAVAAAPVSPTDLPPPPCTLSG----PTDGDICLSPIDVLRGKTAALPAVAPLHLLISRGRGAGGEQNTEGPLAAAVEKTTVTQVLNRLSNLVRRTVLFGSEADIAILRSAMRDGAEDF------NAAWGNGDATQYFLAMASLLQDGLKVR-YDHLKPSYLDAFQRLLDRVVQEMGTTKLGRGRRPDLKMLSEFALWEREVRLNMTGSLWQEHPADMLGGWTLVES-----DDASLLSSTMSRNNARGSEPVGAA--AVTLQPDGVVVVNSGEGTGISWRLDPGPTHLDTCY---ITVALEPESDN--------TVTFMGYIDRGQRLESRLSGRSIRMSGLIYSTGDEGDVPDTVSRFVM 583
BLAST of mRNA_Ecto-sp13_S_contig643.17188.1 vs. uniprot
Match: A0A7S2B002_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B002_9STRA) HSP 1 Score: 131 bits (330), Expect = 4.510e-29 Identity = 139/475 (29.26%), Postives = 223/475 (46.95%), Query Frame = 2
Query: 599 DSVLSGPSLLKDLNTATNKIVKNLLILNSPED------SEPAMRDALKIE------ADFDAQHSESPQYSAAKAYLSCVRQLAIEGCPA--VETL----DALS----EVYKRAFRRVAGVLSDFGCTI------TPGDESGGRIRPVDKDICLS------------ILDYAVSAREQEGT-------------TPTRALNTLVNRVVRTVCVGSDEDLQALAREME---SKHNKFMTKCFGKGSWQGTQE---DMFYDALINLVKHGLTDEGVPALSGAYLNSYQRLMGILVQEVGTRSTPAS-EMVLKS-FLAWEREIRKELTEP----AWKSRPPDLVGSWAL----DTSGWDGLTDLP-------VDSSAAGGGTTDGMVDLGLSDLVVSFRKDGTVQIPVEKGV-GLQWRVEPGPTHLDTIYFEMIPAAPKVKASSKAGAGGGTTLSYTGYVDRGARIEARFSKRFLKMTG 1792
+S +SG SL K LN N +++ L+ SP D + + D LK + AD D++ ++ + + +++C+ L + G + VE L D LS ++Y ++R+ +L++ GC I TP +RP D++ICLS ILD A+ + +Q G T T ALN + N V R++ GS ED+ L+R+M S +KF + S G ++ + ++ AL L+ GL D L +Y+NS++R++G +V + + PA E+ + S F WE ++R +++ W + P +LVG+W+L D S + P + AG DGM L + T Q P V GL WR+ PGPTHLDT Y +V+ ++G + + GY+DRG RIE+RFS R ++M+G
Sbjct: 2 ESSISGVSLRKTLNRLANAVLQVALV-GSPADVLMLSSQQFVLPDRLKEDWSPANPADEDSETAQ--ELARGLVFMNCIFSL-LSGVESTMVEQLTKDADDLSKKGDDLYLVPYKRLKRILNENGCVIQAATARTPPSAEKAVLRPRDRNICLSLKDLMRFQRRDAILDLAMESNDQYGRPHEARFDCDVIPETTTEALNQVSNVVERSLTFGSVEDVSQLSRKMSDDMSDEDKFSLQW--TTSHNGVKDPDAEAYWRALRQLLTEGL-DVDYSNLKQSYMNSFERILGGMVTQQFSAKRPARPELEIASKFANWEMKVRGNMSKSYEGRLWNAYPTELVGNWSLVESDDASLLSSIAIFPGREKTRQIVLQPAGEVKIDGMCPL----------RAATQQQPKLDSVEGLNWRLNPGPTHLDTCYI-------RVRIVEESGE---RNVGFVGYIDRGQRIESRFSNRPIRMSG 449
BLAST of mRNA_Ecto-sp13_S_contig643.17188.1 vs. uniprot
Match: B7FRV5_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRV5_PHATC) HSP 1 Score: 125 bits (315), Expect = 1.780e-26 Identity = 118/419 (28.16%), Postives = 179/419 (42.72%), Query Frame = 2
Query: 737 FDAQHSESPQYSAAKAYLSCVRQLAIEGCPAVETLDALSE-VYKRAFRRVAGVLSDFGCTITPGDESGGRIRP---VDKDICLSILDYAVSAREQEGT------------------------------------TPTRALNTLVNRVVRTVCVGSDEDLQALAREMESKHNKFMTKCFGKGSWQGTQEDM---------FYDALINLVKHGLT-------DEGVPALSGAYLNSYQRLM--------GILVQEVGTRSTPA---SEMVLKSFLAWEREIRKELTEPAWKSRPPDLVGSWALDTSGWDGLTDLPVDSSAAGGGTTDGMVDLGLSDLVVSFRKDGTVQIPVEKGVGLQWRVEPGPTHLDTIYFEMIPAAPKVKASSKAGAGGGTTLSYTGYVDRGARIEARFSKRFLKMTG 1792
F A++ E Y A YL V LA G + ++ L + +Y +++RV VL+ G T E+G R VD+DI LS+LD +E+ T + TR LN L N R + G D++L LA +++ F+ + + G QED+ + + +I L+++ T D +P L +Y N+Y+RL+ G L R P ++ L F WE R+ + P P DL GSW + GG T +GLS +V+ + V +P+E GL+WR++PGPTHLDT F+++ + GT L Y G++DRGAR+EARFSKR L++ G
Sbjct: 305 FRARYGELVGYEYAHDYLEAVLSLATTGIESARSVQVLQDGIYDESYKRVLAVLNTVGVKFTTDPETGRRAIADLLVDQDISLSMLDKIRIQQEERETKSSAALSDLLSDNKEGDDDVLTNQDLGGVLLSAKEPSMTRQLNVLSNIAQRALLFGGDQELLVLAETLDADRQAFVERWYPDTG--GVQEDLVNETRPGIQYLNNVIQLLRNCYTNGMVNNLDPPLPLLK-SYANAYERLVATAVELGSGYLKPVASDRPVPIPRNAKEELGRFALWESNFRQ--STPDVSCYPEDLEGSWEV--------------RDEIGGET------IGLSTVVLKEQGSVEVALPME---GLRWRLDPGPTHLDTCTFQVL-------------SNDGTILQYRGFIDRGARLEARFSKRPLRIRG 682 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig643.17188.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig643.17188.1 >prot_Ecto-sp13_S_contig643.17188.1 ID=prot_Ecto-sp13_S_contig643.17188.1|Name=mRNA_Ecto-sp13_S_contig643.17188.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=552bp MGGSLSEGLLLALILYPFNIFKAAAFVHPKATFGWSSWTYDQSRRLQQPIback to top mRNA from alignment at Ecto-sp13_S_contig643:2308..8189+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig643.17188.1 ID=mRNA_Ecto-sp13_S_contig643.17188.1|Name=mRNA_Ecto-sp13_S_contig643.17188.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5882bp|location=Sequence derived from alignment at Ecto-sp13_S_contig643:2308..8189+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig643:2308..8189+ >mRNA_Ecto-sp13_S_contig643.17188.1 ID=mRNA_Ecto-sp13_S_contig643.17188.1|Name=mRNA_Ecto-sp13_S_contig643.17188.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1656bp|location=Sequence derived from alignment at Ecto-sp13_S_contig643:2308..8189+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |