prot_Ecto-sp13_S_contig6409.17173.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6409.17173.1
Unique Nameprot_Ecto-sp13_S_contig6409.17173.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length277
Homology
BLAST of mRNA_Ecto-sp13_S_contig6409.17173.1 vs. uniprot
Match: A0A6H5L6T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6T0_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 7.760e-9
Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    1 DTDAVLATWDGVNVSAQGRVVRLHLGKNNLQGEIPASIGQLVKLEGL 47
            DTDAVLATWDGVNV+ QGRVV L L +NNLQG IP+ +G L  L  L
Sbjct:   46 DTDAVLATWDGVNVNDQGRVVGLSLIRNNLQGPIPSKLGNLSALTAL 92          
BLAST of mRNA_Ecto-sp13_S_contig6409.17173.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 3.910e-8
Identity = 29/45 (64.44%), Postives = 36/45 (80.00%), Query Frame = 0
Query:    1 DTDAVLATWDGVNVSAQGRVVRLHLGKNNLQGEIPASIGQLVKLE 45
            DTDA L TW GV+V+ QGRVV+L L  NNL+GEIPA++GQL  L+
Sbjct:   28 DTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQ 72          
BLAST of mRNA_Ecto-sp13_S_contig6409.17173.1 vs. uniprot
Match: A0A6H5KQP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQP2_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 4.740e-8
Identity = 30/47 (63.83%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    1 DTDAVLATWDGVNVSAQGRVVRLHLGKNNLQGEIPASIGQLVKLEGL 47
            DTDA LATW+GVNV+ QGRVV L L  NNLQG IP  +G+L  L  L
Sbjct:   28 DTDADLATWNGVNVNVQGRVVNLDLQYNNLQGSIPPELGKLAALRAL 74          
BLAST of mRNA_Ecto-sp13_S_contig6409.17173.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 5.270e-7
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    2 TDAVLATWDGVNVSAQGRVVRLHLGKNNLQGEIPASIGQLVKLEGL 47
            TDA LATWDGV V+ QGRVV+L L  NNLQG IP ++G+L  L+ L
Sbjct:   29 TDAELATWDGVQVNGQGRVVKLGLAANNLQGPIPPALGKLAALQDL 74          
BLAST of mRNA_Ecto-sp13_S_contig6409.17173.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 1.580e-6
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    1 DTDAVLATWDGVNVSAQGRVVRLHLGKNNLQGEIPASIGQLVKLEGL 47
            DTDA L TW GV+V+ QGRVV+L L  NNL+GEIPA++G+L  L+ L
Sbjct:   28 DTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKLGNLQQL 74          
BLAST of mRNA_Ecto-sp13_S_contig6409.17173.1 vs. uniprot
Match: A0A6H5KQQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ0_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 1.910e-6
Identity = 28/47 (59.57%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    1 DTDAVLATWDGVNVSAQGRVVRLHLGKNNLQGEIPASIGQLVKLEGL 47
            +TDA  ATW GV V+ QGRVV + LG NNLQG IP  +G L KL  L
Sbjct:   28 NTDADRATWFGVKVNDQGRVVDVDLGSNNLQGPIPKELGALAKLASL 74          
BLAST of mRNA_Ecto-sp13_S_contig6409.17173.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 2.230e-6
Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    1 DTDAVLATWDGVNVSAQGRVVRLHLGKNNLQGEIPASIGQLVKLEGL 47
            DTDA +ATW GV V+AQGRVV L LG N+L+G IP  +G L +L+ L
Sbjct:   28 DTDAAIATWHGVEVNAQGRVVNLSLGGNSLRGHIPPELGALSELQEL 74          
BLAST of mRNA_Ecto-sp13_S_contig6409.17173.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 2.330e-5
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    1 DTDAVLATWDGVNVSAQGRVVRLHLGKNNLQGEIPASIGQLVKL 44
            DTDA L+TW GV V+ +GRVVRL L  N+LQG IPA +G L KL
Sbjct:   29 DTDAALSTWFGVEVNFEGRVVRLDLLNNDLQGAIPAQLGALNKL 72          
BLAST of mRNA_Ecto-sp13_S_contig6409.17173.1 vs. uniprot
Match: D8LF65_ECTSI (Hypothetical leucine-rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF65_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 3.620e-5
Identity = 27/47 (57.45%), Postives = 33/47 (70.21%), Query Frame = 0
Query:    1 DTDAVLATWDGVNVSAQGRVVRLHLGKNNLQGEIPASIGQLVKLEGL 47
            DTDA LATW GV V+ +GRVV+L L  NNL G IP ++G L +L  L
Sbjct:   28 DTDAELATWAGVEVNDEGRVVQLILPDNNLHGPIPEALGTLNELTHL 74          
BLAST of mRNA_Ecto-sp13_S_contig6409.17173.1 vs. uniprot
Match: A0A6H5JBS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS5_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 4.050e-5
Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 0
Query:    4 AVLATWDGVNVSAQGRVVRLHLGKNNLQGEIPASIGQLVKLEGL 47
            A L+TW GV V+A  RVV L L +NNLQG+IPA +GQLVKL+ L
Sbjct:  237 AELSTWCGVEVNADERVVGLRLRENNLQGKIPAELGQLVKLKEL 280          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6409.17173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5L6T0_9PHAE7.760e-968.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JK91_9PHAE3.910e-864.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQP2_9PHAE4.740e-863.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJS7_ECTSI5.270e-763.04LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LBY3_ECTSI1.580e-661.70Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KQQ0_9PHAE1.910e-659.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX56_ECTSI2.230e-659.57LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FU35_ECTSI2.330e-563.64LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LF65_ECTSI3.620e-557.45Hypothetical leucine-rich repeat protein n=1 Tax=E... [more]
A0A6H5JBS5_9PHAE4.050e-563.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 199..258
e-value: 1.2E-6
score: 28.2
coord: 21..75
e-value: 5.3E-7
score: 29.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..132
e-value: 5.2E-39
score: 135.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 133..270
e-value: 7.0E-43
score: 148.7
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 164..267
coord: 20..75
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 136..215
NoneNo IPR availablePANTHERPTHR27000:SF224RECEPTOR PROTEIN-TYROSINE KINASE CEPR1coord: 80..186
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 80..186
NoneNo IPR availablePANTHERPTHR27000:SF224RECEPTOR PROTEIN-TYROSINE KINASE CEPR1coord: 164..267
coord: 20..75
NoneNo IPR availablePANTHERPTHR27000:SF224RECEPTOR PROTEIN-TYROSINE KINASE CEPR1coord: 136..215
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 18..264

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6409contigEcto-sp13_S_contig6409:2444..7114 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6409.17173.1mRNA_Ecto-sp13_S_contig6409.17173.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6409 2275..7114 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6409.17173.1 ID=prot_Ecto-sp13_S_contig6409.17173.1|Name=mRNA_Ecto-sp13_S_contig6409.17173.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=277bp
DTDAVLATWDGVNVSAQGRVVRLHLGKNNLQGEIPASIGQLVKLEGLNLG
DNKLSGPIPPELGNLSNLQKLDLSGPFVGGDGLTGPIPKELGKLVALKIL
SLWSNQLPGPIPPELGNLSNLQKLDLDLSRPFVCGGGLTGPIPPELGKLA
ALKALSLSENQLSGPIPKELEALSKLEQLVLFSNGLTGYIPPELGALNEL
RVLSLGSNKLTGPIPWELGNLAALQSLDLGVNTLSGPIPEELGKLTGLEQ
LNLARNNLSGEIWNSLEATCMDPAWA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf